data_1AZT # _model_server_result.job_id RVy-s7YwQ66YCqiQd2uhpA _model_server_result.datetime_utc '2024-11-05 20:11:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1azt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":410}' # _entry.id 1AZT # _exptl.entry_id 1AZT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AZT _cell.length_a 88.3 _cell.length_b 96.5 _cell.length_c 133.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AZT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 54 A SER 54 1_555 C MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc2 A OG1 THR 204 A THR 204 1_555 C MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc3 C MG MG . A MG 403 1_555 M O2G GSP . A GSP 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc4 C MG MG . A MG 403 1_555 M O2B GSP . A GSP 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc5 C MG MG . A MG 403 1_555 W O HOH . A HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? metalc ? metalc6 B OG SER 54 B SER 54 1_555 Q MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc7 B OG1 THR 204 B THR 204 1_555 Q MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc8 B OD2 ASP 223 B ASP 223 1_555 Q MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.03 ? metalc ? metalc9 Q MG MG . B MG 406 1_555 V O2B GSP . B GSP 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc10 Q MG MG . B MG 406 1_555 V O2G GSP . B GSP 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc11 Q MG MG . B MG 406 1_555 X O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 310 n n P O2 PO4 sing 311 n n P O3 PO4 sing 312 n n P O4 PO4 sing 313 n n # _atom_sites.entry_id 1AZT _atom_sites.fract_transf_matrix[1][1] 0.011325 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 403 396 MG MG . D 3 PO4 A 1 404 397 PO4 PO4 . E 3 PO4 A 1 405 398 PO4 PO4 . F 3 PO4 A 1 406 399 PO4 PO4 . G 3 PO4 A 1 407 402 PO4 PO4 . H 3 PO4 A 1 408 404 PO4 PO4 . I 3 PO4 A 1 409 397 PO4 PO4 . J 3 PO4 A 1 410 400 PO4 PO4 . K 3 PO4 A 1 411 401 PO4 PO4 . L 3 PO4 A 1 412 403 PO4 PO4 . M 4 GSP A 1 413 395 GSP GSP . N 3 PO4 B 1 403 400 PO4 PO4 . O 3 PO4 B 1 404 401 PO4 PO4 . P 3 PO4 B 1 405 403 PO4 PO4 . Q 2 MG B 1 406 396 MG MG . R 3 PO4 B 1 407 398 PO4 PO4 . S 3 PO4 B 1 408 399 PO4 PO4 . T 3 PO4 B 1 409 402 PO4 PO4 . U 3 PO4 B 1 410 404 PO4 PO4 . V 4 GSP B 1 411 395 GSP GSP . W 5 HOH A 1 414 405 HOH HOH . W 5 HOH A 2 415 406 HOH HOH . W 5 HOH A 3 416 407 HOH HOH . W 5 HOH A 4 417 409 HOH HOH . W 5 HOH A 5 418 410 HOH HOH . W 5 HOH A 6 419 411 HOH HOH . W 5 HOH A 7 420 412 HOH HOH . W 5 HOH A 8 421 413 HOH HOH . W 5 HOH A 9 422 414 HOH HOH . W 5 HOH A 10 423 415 HOH HOH . W 5 HOH A 11 424 416 HOH HOH . W 5 HOH A 12 425 417 HOH HOH . W 5 HOH A 13 426 418 HOH HOH . W 5 HOH A 14 427 419 HOH HOH . W 5 HOH A 15 428 420 HOH HOH . W 5 HOH A 16 429 421 HOH HOH . W 5 HOH A 17 430 422 HOH HOH . W 5 HOH A 18 431 423 HOH HOH . W 5 HOH A 19 432 424 HOH HOH . W 5 HOH A 20 433 425 HOH HOH . W 5 HOH A 21 434 427 HOH HOH . W 5 HOH A 22 435 428 HOH HOH . W 5 HOH A 23 436 429 HOH HOH . W 5 HOH A 24 437 430 HOH HOH . W 5 HOH A 25 438 431 HOH HOH . W 5 HOH A 26 439 405 HOH HOH . W 5 HOH A 27 440 408 HOH HOH . W 5 HOH A 28 441 426 HOH HOH . X 5 HOH B 1 412 426 HOH HOH . X 5 HOH B 2 413 406 HOH HOH . X 5 HOH B 3 414 407 HOH HOH . X 5 HOH B 4 415 409 HOH HOH . X 5 HOH B 5 416 410 HOH HOH . X 5 HOH B 6 417 411 HOH HOH . X 5 HOH B 7 418 412 HOH HOH . X 5 HOH B 8 419 413 HOH HOH . X 5 HOH B 9 420 414 HOH HOH . X 5 HOH B 10 421 415 HOH HOH . X 5 HOH B 11 422 416 HOH HOH . X 5 HOH B 12 423 417 HOH HOH . X 5 HOH B 13 424 418 HOH HOH . X 5 HOH B 14 425 419 HOH HOH . X 5 HOH B 15 426 420 HOH HOH . X 5 HOH B 16 427 421 HOH HOH . X 5 HOH B 17 428 422 HOH HOH . X 5 HOH B 18 429 423 HOH HOH . X 5 HOH B 19 430 424 HOH HOH . X 5 HOH B 20 431 425 HOH HOH . X 5 HOH B 21 432 427 HOH HOH . X 5 HOH B 22 433 428 HOH HOH . X 5 HOH B 23 434 429 HOH HOH . X 5 HOH B 24 435 430 HOH HOH . X 5 HOH B 25 436 431 HOH HOH . X 5 HOH B 26 437 432 HOH HOH . X 5 HOH B 27 438 433 HOH HOH . X 5 HOH B 28 439 434 HOH HOH . X 5 HOH B 29 440 435 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . U 3 28.754 23.977 12.816 1 95 ? P PO4 410 B 1 HETATM 2 O O1 PO4 . . . U 3 28.144 24.353 14.121 1 91.67 ? O1 PO4 410 B 1 HETATM 3 O O2 PO4 . . . U 3 28.92 25.228 12.006 1 94.05 ? O2 PO4 410 B 1 HETATM 4 O O3 PO4 . . . U 3 30.054 23.283 13.075 1 94.42 ? O3 PO4 410 B 1 HETATM 5 O O4 PO4 . . . U 3 27.887 23.033 12.038 1 95.36 ? O4 PO4 410 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 5 #