data_1B07 # _model_server_result.job_id M3le5E6rvfeABNP3N_cDxQ _model_server_result.datetime_utc '2025-02-27 12:43:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1005}' # _entry.id 1B07 # _exptl.entry_id 1B07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.165 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1B07 _cell.length_a 36.8 _cell.length_b 36.8 _cell.length_c 52.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id N _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 5 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 5 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id CB _struct_conn.ptnr2_label_comp_id PYJ _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id PYJ _struct_conn.ptnr2_auth_seq_id 1005 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.47 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H10' _chem_comp.formula_weight 106.165 _chem_comp.id PYJ _chem_comp.mon_nstd_flag . _chem_comp.name PHENYLETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CB CX PYJ sing 264 n n CB CG PYJ sing 265 n n CB HCB1 PYJ sing 266 n n CB HCB2 PYJ sing 267 n n CX HCX1 PYJ sing 268 n n CX HCX2 PYJ sing 269 n n CX HCX3 PYJ sing 270 n n CG CD1 PYJ doub 271 n y CG CD2 PYJ sing 272 n y CD1 CE1 PYJ sing 273 n y CD1 HCD1 PYJ sing 274 n n CD2 CE2 PYJ doub 275 n y CD2 HCD2 PYJ sing 276 n n CE1 CZ PYJ doub 277 n y CE1 HCE1 PYJ sing 278 n n CE2 CZ PYJ sing 279 n y CE2 HCE2 PYJ sing 280 n n CZ HCZ1 PYJ sing 281 n n # _atom_sites.entry_id 1B07 _atom_sites.fract_transf_matrix[1][1] 0.027174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PYJ C 1 1005 1005 PYJ PYJ . D 4 HOH A 1 21 21 HOH HOH . D 4 HOH A 2 22 22 HOH HOH . D 4 HOH A 3 23 23 HOH HOH . D 4 HOH A 4 24 24 HOH HOH . D 4 HOH A 5 25 25 HOH HOH . D 4 HOH A 6 29 29 HOH HOH . D 4 HOH A 7 30 30 HOH HOH . D 4 HOH A 8 31 31 HOH HOH . D 4 HOH A 9 32 32 HOH HOH . D 4 HOH A 10 33 33 HOH HOH . D 4 HOH A 11 35 35 HOH HOH . D 4 HOH A 12 36 36 HOH HOH . D 4 HOH A 13 37 37 HOH HOH . D 4 HOH A 14 38 38 HOH HOH . D 4 HOH A 15 40 40 HOH HOH . D 4 HOH A 16 41 41 HOH HOH . D 4 HOH A 17 42 42 HOH HOH . D 4 HOH A 18 43 43 HOH HOH . D 4 HOH A 19 44 44 HOH HOH . D 4 HOH A 20 45 45 HOH HOH . D 4 HOH A 21 46 46 HOH HOH . D 4 HOH A 22 47 47 HOH HOH . D 4 HOH A 23 48 48 HOH HOH . D 4 HOH A 24 49 49 HOH HOH . D 4 HOH A 25 51 51 HOH HOH . D 4 HOH A 26 52 52 HOH HOH . D 4 HOH A 27 54 54 HOH HOH . D 4 HOH A 28 55 55 HOH HOH . D 4 HOH A 29 56 56 HOH HOH . D 4 HOH A 30 59 59 HOH HOH . D 4 HOH A 31 61 61 HOH HOH . D 4 HOH A 32 62 62 HOH HOH . D 4 HOH A 33 63 63 HOH HOH . D 4 HOH A 34 64 64 HOH HOH . D 4 HOH A 35 65 65 HOH HOH . D 4 HOH A 36 66 66 HOH HOH . E 4 HOH C 1 26 26 HOH HOH . E 4 HOH C 2 27 27 HOH HOH . E 4 HOH C 3 28 28 HOH HOH . E 4 HOH C 4 34 34 HOH HOH . E 4 HOH C 5 39 39 HOH HOH . E 4 HOH C 6 50 50 HOH HOH . E 4 HOH C 7 53 53 HOH HOH . E 4 HOH C 8 57 57 HOH HOH . E 4 HOH C 9 58 58 HOH HOH . E 4 HOH C 10 60 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CB PYJ . . . C 3 7.897 29.75 9.573 1 18.54 ? CB PYJ 1005 C 1 HETATM 2 C CX PYJ . . . C 3 7.58 29.245 8.154 1 16.82 ? CX PYJ 1005 C 1 HETATM 3 C CG PYJ . . . C 3 9.13 30.594 9.737 1 21.75 ? CG PYJ 1005 C 1 HETATM 4 C CD1 PYJ . . . C 3 9.259 31.569 8.749 1 23.25 ? CD1 PYJ 1005 C 1 HETATM 5 C CD2 PYJ . . . C 3 10.077 30.484 10.756 1 23.21 ? CD2 PYJ 1005 C 1 HETATM 6 C CE1 PYJ . . . C 3 10.314 32.484 8.708 1 22.13 ? CE1 PYJ 1005 C 1 HETATM 7 C CE2 PYJ . . . C 3 11.14 31.373 10.75 1 23.82 ? CE2 PYJ 1005 C 1 HETATM 8 C CZ PYJ . . . C 3 11.234 32.336 9.75 1 22.85 ? CZ PYJ 1005 C 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #