data_1B0N
#
_model_server_result.job_id            uoGMwn9yOWz-ruFArZm0pw 
_model_server_result.datetime_utc      '2024-12-26 12:05:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1b0n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    1B0N 
#
_exptl.entry_id    1B0N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1B0N 
_cell.length_a            60.9 
_cell.length_b            60.9 
_cell.length_c            87.74 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1B0N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
PISA tetrameric 4 software_defined_assembly 4 
PISA tetrameric 4 software_defined_assembly 5 
PISA tetrameric 4 software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I 1 1 
A,B,C,D,E,F,G,H,I 2 1,2 
A,B,C,D,E,F,G,H,I 3 1,3 
A,C,D,E,F,G,H 4 1,3 
B,I 4 4,5 
A,C,D,E,F,G,H 5 1,2 
B,I 5 4,6 
A,C,D,E,F,G,H 6 1,3 
B,I 6 7,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 87.74 
3 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 105.481894 58.493333 
4 'crystal symmetry operation' 2_665 -y+1,x-y+1,z+1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 30.45 52.740947 29.246667 
5 'crystal symmetry operation' 6_665 -x+1,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 30.45 52.740947 29.246667 
6 'crystal symmetry operation' 5_665 x-y+1,-y+1,-z+2/3 1 0 0 0 -1 0 0 0 -1 30.45 52.740947 58.493333 
7 'crystal symmetry operation' 3_674 -x+y+1,-x+2,z-1/3 -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 105.481894 -29.246667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N MET 1 A MET 1 1_555 F ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc2 A O MET 1 A MET 1 1_555 F ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc3 A OE1 GLU 19 A GLU 19 4_556 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? 
metalc ? metalc4 A OE2 GLU 19 A GLU 19 4_556 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? 
metalc ? metalc5 A OE2 GLU 48 A GLU 48 5_675 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc6 A OD2 ASP 55 A ASP 55 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc7 A OD2 ASP 63 A ASP 63 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? 
metalc ? metalc8 A OE1 GLU 64 A GLU 64 1_555 F ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc9 A NE2 HIS 66 A HIS 66 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? 
metalc ? metalc10 A ND1 HIS 66 A HIS 66 1_555 G ZN ZN . A ZN 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc11 A NZ LYS 92 A LYS 92 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc12 A OE1 GLU 97 A GLU 97 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? 
metalc ? metalc13 A OE2 GLU 97 A GLU 97 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc14 C ZN ZN . A ZN 1001 1_555 B OE2 GLU 17 B GLU 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? 
metalc ? metalc15 C ZN ZN . A ZN 1001 1_555 B OE1 GLU 17 B GLU 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? 
metalc ? metalc16 C ZN ZN . A ZN 1001 1_555 B OE2 GLU 21 B GLU 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc17 D ZN ZN . A ZN 1002 1_555 H O HOH . A HOH 1095 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc18 D ZN ZN . A ZN 1002 1_555 H O HOH . A HOH 1096 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
metalc ? metalc19 E ZN ZN . A ZN 1003 1_555 B OD2 ASP 12 B ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? 
metalc ? metalc20 F ZN ZN . A ZN 1004 1_555 H O HOH . A HOH 1081 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc21 F ZN ZN . A ZN 1004 1_555 B OE1 GLU 30 B GLU 30 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? 
metalc ? metalc22 G ZN ZN . A ZN 1005 1_555 B OE2 GLU 24 B GLU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc23 G ZN ZN . A ZN 1005 1_555 I O HOH . B HOH 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc24 G ZN ZN . A ZN 1005 1_555 I O HOH . B HOH 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.603 ? 
metalc ? metalc25 G ZN ZN . A ZN 1005 1_555 I O HOH . B HOH 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.612 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1B0N 
_atom_sites.fract_transf_matrix[1][1]    0.01642 
_atom_sites.fract_transf_matrix[1][2]    0.00948 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01896 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011397 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 1001 1001 ZN ZN . 
D 3 ZN A 1 1002 1002 ZN ZN . 
E 3 ZN A 1 1003 1003 ZN ZN . 
F 3 ZN A 1 1004 1004 ZN ZN . 
G 3 ZN A 1 1005 1005 ZN ZNO . 
H 4 HOH A 1 1006 1 HOH HOH . 
H 4 HOH A 2 1007 2 HOH HOH . 
H 4 HOH A 3 1008 3 HOH HOH . 
H 4 HOH A 4 1009 4 HOH HOH . 
H 4 HOH A 5 1010 5 HOH HOH . 
H 4 HOH A 6 1011 6 HOH HOH . 
H 4 HOH A 7 1012 7 HOH HOH . 
H 4 HOH A 8 1013 8 HOH HOH . 
H 4 HOH A 9 1014 9 HOH HOH . 
H 4 HOH A 10 1015 11 HOH HOH . 
H 4 HOH A 11 1016 14 HOH HOH . 
H 4 HOH A 12 1017 15 HOH HOH . 
H 4 HOH A 13 1018 16 HOH HOH . 
H 4 HOH A 14 1019 17 HOH HOH . 
H 4 HOH A 15 1020 18 HOH HOH . 
H 4 HOH A 16 1021 19 HOH HOH . 
H 4 HOH A 17 1022 20 HOH HOH . 
H 4 HOH A 18 1023 23 HOH HOH . 
H 4 HOH A 19 1024 24 HOH HOH . 
H 4 HOH A 20 1025 25 HOH HOH . 
H 4 HOH A 21 1026 27 HOH HOH . 
H 4 HOH A 22 1027 28 HOH HOH . 
H 4 HOH A 23 1028 29 HOH HOH . 
H 4 HOH A 24 1029 31 HOH HOH . 
H 4 HOH A 25 1030 32 HOH HOH . 
H 4 HOH A 26 1031 33 HOH HOH . 
H 4 HOH A 27 1032 34 HOH HOH . 
H 4 HOH A 28 1033 35 HOH HOH . 
H 4 HOH A 29 1034 36 HOH HOH . 
H 4 HOH A 30 1035 37 HOH HOH . 
H 4 HOH A 31 1036 38 HOH HOH . 
H 4 HOH A 32 1037 39 HOH HOH . 
H 4 HOH A 33 1038 40 HOH HOH . 
H 4 HOH A 34 1039 42 HOH HOH . 
H 4 HOH A 35 1040 43 HOH HOH . 
H 4 HOH A 36 1041 44 HOH HOH . 
H 4 HOH A 37 1042 45 HOH HOH . 
H 4 HOH A 38 1043 46 HOH HOH . 
H 4 HOH A 39 1044 47 HOH HOH . 
H 4 HOH A 40 1045 49 HOH HOH . 
H 4 HOH A 41 1046 51 HOH HOH . 
H 4 HOH A 42 1047 52 HOH HOH . 
H 4 HOH A 43 1048 53 HOH HOH . 
H 4 HOH A 44 1049 55 HOH HOH . 
H 4 HOH A 45 1050 57 HOH HOH . 
H 4 HOH A 46 1051 58 HOH HOH . 
H 4 HOH A 47 1052 61 HOH HOH . 
H 4 HOH A 48 1053 62 HOH HOH . 
H 4 HOH A 49 1054 63 HOH HOH . 
H 4 HOH A 50 1055 64 HOH HOH . 
H 4 HOH A 51 1056 65 HOH HOH . 
H 4 HOH A 52 1057 66 HOH HOH . 
H 4 HOH A 53 1058 67 HOH HOH . 
H 4 HOH A 54 1059 68 HOH HOH . 
H 4 HOH A 55 1060 69 HOH HOH . 
H 4 HOH A 56 1061 70 HOH HOH . 
H 4 HOH A 57 1062 71 HOH HOH . 
H 4 HOH A 58 1063 72 HOH HOH . 
H 4 HOH A 59 1064 73 HOH HOH . 
H 4 HOH A 60 1065 75 HOH HOH . 
H 4 HOH A 61 1066 76 HOH HOH . 
H 4 HOH A 62 1067 77 HOH HOH . 
H 4 HOH A 63 1068 78 HOH HOH . 
H 4 HOH A 64 1069 79 HOH HOH . 
H 4 HOH A 65 1070 80 HOH HOH . 
H 4 HOH A 66 1071 81 HOH HOH . 
H 4 HOH A 67 1072 82 HOH HOH . 
H 4 HOH A 68 1073 83 HOH HOH . 
H 4 HOH A 69 1074 84 HOH HOH . 
H 4 HOH A 70 1075 85 HOH HOH . 
H 4 HOH A 71 1076 87 HOH HOH . 
H 4 HOH A 72 1077 88 HOH HOH . 
H 4 HOH A 73 1078 89 HOH HOH . 
H 4 HOH A 74 1079 90 HOH HOH . 
H 4 HOH A 75 1080 91 HOH HOH . 
H 4 HOH A 76 1081 92 HOH HOH . 
H 4 HOH A 77 1082 94 HOH HOH . 
H 4 HOH A 78 1083 95 HOH HOH . 
H 4 HOH A 79 1084 96 HOH HOH . 
H 4 HOH A 80 1085 97 HOH HOH . 
H 4 HOH A 81 1086 99 HOH HOH . 
H 4 HOH A 82 1087 102 HOH HOH . 
H 4 HOH A 83 1088 107 HOH HOH . 
H 4 HOH A 84 1089 110 HOH HOH . 
H 4 HOH A 85 1090 111 HOH HOH . 
H 4 HOH A 86 1091 112 HOH HOH . 
H 4 HOH A 87 1092 113 HOH HOH . 
H 4 HOH A 88 1093 114 HOH HOH . 
H 4 HOH A 89 1094 115 HOH HOH . 
H 4 HOH A 90 1095 118 HOH HOH . 
H 4 HOH A 91 1096 119 HOH HOH . 
H 4 HOH A 92 1097 121 HOH HOH . 
H 4 HOH A 93 1098 123 HOH HOH . 
H 4 HOH A 94 1099 124 HOH HOH . 
I 4 HOH B 1 58 10 HOH HOH . 
I 4 HOH B 2 59 12 HOH HOH . 
I 4 HOH B 3 60 13 HOH HOH . 
I 4 HOH B 4 61 22 HOH HOH . 
I 4 HOH B 5 62 26 HOH HOH . 
I 4 HOH B 6 63 30 HOH HOH . 
I 4 HOH B 7 64 41 HOH HOH . 
I 4 HOH B 8 65 48 HOH HOH . 
I 4 HOH B 9 66 50 HOH HOH . 
I 4 HOH B 10 67 54 HOH HOH . 
I 4 HOH B 11 68 56 HOH HOH . 
I 4 HOH B 12 69 59 HOH HOH . 
I 4 HOH B 13 70 60 HOH HOH . 
I 4 HOH B 14 71 74 HOH HOH . 
I 4 HOH B 15 72 98 HOH HOH . 
I 4 HOH B 16 73 101 HOH HOH . 
I 4 HOH B 17 74 104 HOH HOH . 
I 4 HOH B 18 75 108 HOH HOH . 
I 4 HOH B 19 76 116 HOH HOH . 
I 4 HOH B 20 77 125 HOH HOH . 
I 4 HOH B 21 78 126 HOH HOH . 
I 4 HOH B 22 79 1005 HOH ZNO . 
I 4 HOH B 23 80 1005 HOH ZNO . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               5.847 
_atom_site.Cartn_y               44.694 
_atom_site.Cartn_z               34.774 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1001 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#