data_1B1Y # _model_server_result.job_id 18mw1lWCtL3lvtvlq_3IgQ _model_server_result.datetime_utc '2024-11-27 04:48:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":552}' # _entry.id 1B1Y # _exptl.entry_id 1B1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1B1Y _cell.length_a 72.11 _cell.length_b 72.11 _cell.length_c 250.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B BGC 1 B 1 BGC B 551 BGC 2 n B GLC 2 B 2 GLC B 550 GLC # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id O4 _struct_conn.ptnr1_label_comp_id BGC _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id BGC _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id GLC _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id GLC _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.426 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1B1Y _atom_sites.fract_transf_matrix[1][1] 0.013868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003992 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 BGC A 1 552 552 BGC BGC . D 4 HOH A 1 600 600 HOH HOH . D 4 HOH A 2 601 601 HOH HOH . D 4 HOH A 3 602 602 HOH HOH . D 4 HOH A 4 603 603 HOH HOH . D 4 HOH A 5 604 604 HOH HOH . D 4 HOH A 6 605 605 HOH HOH . D 4 HOH A 7 606 606 HOH HOH . D 4 HOH A 8 607 607 HOH HOH . D 4 HOH A 9 608 608 HOH HOH . D 4 HOH A 10 609 609 HOH HOH . D 4 HOH A 11 610 610 HOH HOH . D 4 HOH A 12 611 611 HOH HOH . D 4 HOH A 13 612 612 HOH HOH . D 4 HOH A 14 613 613 HOH HOH . D 4 HOH A 15 614 614 HOH HOH . D 4 HOH A 16 615 615 HOH HOH . D 4 HOH A 17 616 616 HOH HOH . D 4 HOH A 18 617 617 HOH HOH . D 4 HOH A 19 618 618 HOH HOH . D 4 HOH A 20 619 619 HOH HOH . D 4 HOH A 21 620 620 HOH HOH . D 4 HOH A 22 621 621 HOH HOH . D 4 HOH A 23 622 622 HOH HOH . D 4 HOH A 24 623 623 HOH HOH . D 4 HOH A 25 624 624 HOH HOH . D 4 HOH A 26 625 625 HOH HOH . D 4 HOH A 27 626 626 HOH HOH . D 4 HOH A 28 627 627 HOH HOH . D 4 HOH A 29 628 628 HOH HOH . D 4 HOH A 30 629 629 HOH HOH . D 4 HOH A 31 630 630 HOH HOH . D 4 HOH A 32 631 631 HOH HOH . D 4 HOH A 33 632 632 HOH HOH . D 4 HOH A 34 633 633 HOH HOH . D 4 HOH A 35 634 634 HOH HOH . D 4 HOH A 36 635 635 HOH HOH . D 4 HOH A 37 636 636 HOH HOH . D 4 HOH A 38 637 637 HOH HOH . D 4 HOH A 39 638 638 HOH HOH . D 4 HOH A 40 639 639 HOH HOH . D 4 HOH A 41 640 640 HOH HOH . D 4 HOH A 42 641 641 HOH HOH . D 4 HOH A 43 642 642 HOH HOH . D 4 HOH A 44 643 643 HOH HOH . D 4 HOH A 45 644 644 HOH HOH . D 4 HOH A 46 645 645 HOH HOH . D 4 HOH A 47 646 646 HOH HOH . D 4 HOH A 48 647 647 HOH HOH . D 4 HOH A 49 648 648 HOH HOH . D 4 HOH A 50 649 649 HOH HOH . D 4 HOH A 51 650 650 HOH HOH . D 4 HOH A 52 651 651 HOH HOH . D 4 HOH A 53 652 652 HOH HOH . D 4 HOH A 54 653 653 HOH HOH . D 4 HOH A 55 654 654 HOH HOH . D 4 HOH A 56 655 655 HOH HOH . D 4 HOH A 57 656 656 HOH HOH . D 4 HOH A 58 657 657 HOH HOH . D 4 HOH A 59 658 658 HOH HOH . D 4 HOH A 60 659 659 HOH HOH . D 4 HOH A 61 660 660 HOH HOH . D 4 HOH A 62 661 661 HOH HOH . D 4 HOH A 63 662 662 HOH HOH . D 4 HOH A 64 663 663 HOH HOH . D 4 HOH A 65 664 664 HOH HOH . D 4 HOH A 66 665 665 HOH HOH . D 4 HOH A 67 666 666 HOH HOH . D 4 HOH A 68 667 667 HOH HOH . D 4 HOH A 69 668 668 HOH HOH . D 4 HOH A 70 669 669 HOH HOH . D 4 HOH A 71 670 670 HOH HOH . D 4 HOH A 72 671 671 HOH HOH . D 4 HOH A 73 672 672 HOH HOH . D 4 HOH A 74 673 673 HOH HOH . D 4 HOH A 75 674 674 HOH HOH . D 4 HOH A 76 675 675 HOH HOH . D 4 HOH A 77 676 676 HOH HOH . D 4 HOH A 78 677 677 HOH HOH . D 4 HOH A 79 678 678 HOH HOH . D 4 HOH A 80 679 679 HOH HOH . D 4 HOH A 81 680 680 HOH HOH . D 4 HOH A 82 681 681 HOH HOH . D 4 HOH A 83 682 682 HOH HOH . D 4 HOH A 84 683 683 HOH HOH . D 4 HOH A 85 684 684 HOH HOH . D 4 HOH A 86 685 685 HOH HOH . D 4 HOH A 87 686 686 HOH HOH . D 4 HOH A 88 687 687 HOH HOH . D 4 HOH A 89 688 688 HOH HOH . D 4 HOH A 90 689 689 HOH HOH . D 4 HOH A 91 690 690 HOH HOH . D 4 HOH A 92 691 691 HOH HOH . D 4 HOH A 93 692 692 HOH HOH . D 4 HOH A 94 693 693 HOH HOH . D 4 HOH A 95 694 694 HOH HOH . D 4 HOH A 96 695 695 HOH HOH . D 4 HOH A 97 696 696 HOH HOH . D 4 HOH A 98 697 697 HOH HOH . D 4 HOH A 99 698 698 HOH HOH . D 4 HOH A 100 699 699 HOH HOH . D 4 HOH A 101 700 700 HOH HOH . D 4 HOH A 102 701 701 HOH HOH . D 4 HOH A 103 702 702 HOH HOH . D 4 HOH A 104 703 703 HOH HOH . D 4 HOH A 105 704 704 HOH HOH . D 4 HOH A 106 705 705 HOH HOH . D 4 HOH A 107 706 706 HOH HOH . D 4 HOH A 108 707 707 HOH HOH . D 4 HOH A 109 708 708 HOH HOH . D 4 HOH A 110 709 709 HOH HOH . D 4 HOH A 111 710 710 HOH HOH . D 4 HOH A 112 711 711 HOH HOH . D 4 HOH A 113 712 712 HOH HOH . D 4 HOH A 114 713 713 HOH HOH . D 4 HOH A 115 714 714 HOH HOH . D 4 HOH A 116 715 715 HOH HOH . D 4 HOH A 117 716 716 HOH HOH . D 4 HOH A 118 717 717 HOH HOH . D 4 HOH A 119 718 718 HOH HOH . D 4 HOH A 120 719 719 HOH HOH . D 4 HOH A 121 720 720 HOH HOH . D 4 HOH A 122 721 721 HOH HOH . D 4 HOH A 123 722 722 HOH HOH . D 4 HOH A 124 723 723 HOH HOH . D 4 HOH A 125 724 724 HOH HOH . D 4 HOH A 126 725 725 HOH HOH . D 4 HOH A 127 726 726 HOH HOH . D 4 HOH A 128 727 727 HOH HOH . D 4 HOH A 129 728 728 HOH HOH . D 4 HOH A 130 729 729 HOH HOH . D 4 HOH A 131 730 730 HOH HOH . D 4 HOH A 132 731 731 HOH HOH . D 4 HOH A 133 732 732 HOH HOH . D 4 HOH A 134 733 733 HOH HOH . D 4 HOH A 135 734 734 HOH HOH . D 4 HOH A 136 735 735 HOH HOH . D 4 HOH A 137 736 736 HOH HOH . D 4 HOH A 138 737 737 HOH HOH . D 4 HOH A 139 738 738 HOH HOH . D 4 HOH A 140 739 739 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . C 3 27.315 29.228 47.283 1 46.83 ? C2 BGC 552 A 1 HETATM 2 C C3 BGC . . . C 3 28.599 29.722 46.556 1 43.44 ? C3 BGC 552 A 1 HETATM 3 C C4 BGC . . . C 3 29.07 28.705 45.461 1 40.53 ? C4 BGC 552 A 1 HETATM 4 C C5 BGC . . . C 3 27.916 28.256 44.547 1 43.93 ? C5 BGC 552 A 1 HETATM 5 C C6 BGC . . . C 3 28.308 27.143 43.582 1 47.2 ? C6 BGC 552 A 1 HETATM 6 C C1 BGC . . . C 3 26.269 28.806 46.215 1 53.45 ? C1 BGC 552 A 1 HETATM 7 O O1 BGC . . . C 3 25.026 28.382 46.763 1 52.99 ? O1 BGC 552 A 1 HETATM 8 O O2 BGC . . . C 3 26.783 30.257 48.114 1 48.76 ? O2 BGC 552 A 1 HETATM 9 O O3 BGC . . . C 3 29.649 29.914 47.486 1 40.8 ? O3 BGC 552 A 1 HETATM 10 O O4 BGC . . . C 3 30.062 29.287 44.624 1 27.54 ? O4 BGC 552 A 1 HETATM 11 O O5 BGC . . . C 3 26.816 27.788 45.359 1 50.6 ? O5 BGC 552 A 1 HETATM 12 O O6 BGC . . . C 3 27.255 26.849 42.676 1 50.58 ? O6 BGC 552 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 12 #