data_1B39 # _model_server_result.job_id AY4qFoAP3ZlnFvFLNVircA _model_server_result.datetime_utc '2024-10-24 04:32:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b39 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":382}' # _entry.id 1B39 # _exptl.entry_id 1B39 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1B39 _cell.length_a 53.42 _cell.length_b 71.66 _cell.length_c 72.52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD1 ASN 133 A ASN 132 1_555 B MG MG . A MG 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A OD2 ASP 146 A ASP 145 1_555 B MG MG . A MG 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc3 C O1B ATP . A ATP 381 1_555 B MG MG . A MG 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc4 C O2A ATP . A ATP 381 1_555 B MG MG . A MG 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc5 C O2G ATP . A ATP 381 1_555 B MG MG . A MG 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc6 B MG MG . A MG 382 1_555 D O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1B39 _atom_sites.fract_transf_matrix[1][1] 0.018719 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 382 382 MG MG . C 3 ATP A 1 381 381 ATP ATP . D 4 HOH A 1 383 1 HOH HOH . D 4 HOH A 2 384 2 HOH HOH . D 4 HOH A 3 385 3 HOH HOH . D 4 HOH A 4 386 4 HOH HOH . D 4 HOH A 5 387 5 HOH HOH . D 4 HOH A 6 388 6 HOH HOH . D 4 HOH A 7 389 7 HOH HOH . D 4 HOH A 8 390 8 HOH HOH . D 4 HOH A 9 391 9 HOH HOH . D 4 HOH A 10 392 10 HOH HOH . D 4 HOH A 11 393 11 HOH HOH . D 4 HOH A 12 394 12 HOH HOH . D 4 HOH A 13 395 13 HOH HOH . D 4 HOH A 14 396 14 HOH HOH . D 4 HOH A 15 397 15 HOH HOH . D 4 HOH A 16 398 16 HOH HOH . D 4 HOH A 17 399 17 HOH HOH . D 4 HOH A 18 400 18 HOH HOH . D 4 HOH A 19 401 19 HOH HOH . D 4 HOH A 20 402 20 HOH HOH . D 4 HOH A 21 403 21 HOH HOH . D 4 HOH A 22 404 22 HOH HOH . D 4 HOH A 23 405 23 HOH HOH . D 4 HOH A 24 406 24 HOH HOH . D 4 HOH A 25 407 25 HOH HOH . D 4 HOH A 26 408 26 HOH HOH . D 4 HOH A 27 409 27 HOH HOH . D 4 HOH A 28 410 28 HOH HOH . D 4 HOH A 29 411 29 HOH HOH . D 4 HOH A 30 412 30 HOH HOH . D 4 HOH A 31 413 31 HOH HOH . D 4 HOH A 32 414 32 HOH HOH . D 4 HOH A 33 415 33 HOH HOH . D 4 HOH A 34 416 34 HOH HOH . D 4 HOH A 35 417 35 HOH HOH . D 4 HOH A 36 418 36 HOH HOH . D 4 HOH A 37 419 37 HOH HOH . D 4 HOH A 38 420 38 HOH HOH . D 4 HOH A 39 421 39 HOH HOH . D 4 HOH A 40 422 40 HOH HOH . D 4 HOH A 41 423 41 HOH HOH . D 4 HOH A 42 424 42 HOH HOH . D 4 HOH A 43 425 43 HOH HOH . D 4 HOH A 44 426 44 HOH HOH . D 4 HOH A 45 427 45 HOH HOH . D 4 HOH A 46 428 46 HOH HOH . D 4 HOH A 47 429 47 HOH HOH . D 4 HOH A 48 430 48 HOH HOH . D 4 HOH A 49 431 49 HOH HOH . D 4 HOH A 50 432 50 HOH HOH . D 4 HOH A 51 433 51 HOH HOH . D 4 HOH A 52 434 52 HOH HOH . D 4 HOH A 53 435 53 HOH HOH . D 4 HOH A 54 436 54 HOH HOH . D 4 HOH A 55 437 55 HOH HOH . D 4 HOH A 56 438 56 HOH HOH . D 4 HOH A 57 439 57 HOH HOH . D 4 HOH A 58 440 58 HOH HOH . D 4 HOH A 59 441 59 HOH HOH . D 4 HOH A 60 442 60 HOH HOH . D 4 HOH A 61 443 61 HOH HOH . D 4 HOH A 62 444 62 HOH HOH . D 4 HOH A 63 445 63 HOH HOH . D 4 HOH A 64 446 64 HOH HOH . D 4 HOH A 65 447 65 HOH HOH . D 4 HOH A 66 448 66 HOH HOH . D 4 HOH A 67 449 67 HOH HOH . D 4 HOH A 68 450 68 HOH HOH . D 4 HOH A 69 451 69 HOH HOH . D 4 HOH A 70 452 70 HOH HOH . D 4 HOH A 71 453 71 HOH HOH . D 4 HOH A 72 454 72 HOH HOH . D 4 HOH A 73 455 73 HOH HOH . D 4 HOH A 74 456 74 HOH HOH . D 4 HOH A 75 457 75 HOH HOH . D 4 HOH A 76 458 76 HOH HOH . D 4 HOH A 77 459 77 HOH HOH . D 4 HOH A 78 460 80 HOH HOH . D 4 HOH A 79 461 81 HOH HOH . D 4 HOH A 80 462 82 HOH HOH . D 4 HOH A 81 463 83 HOH HOH . D 4 HOH A 82 464 84 HOH HOH . D 4 HOH A 83 465 85 HOH HOH . D 4 HOH A 84 466 86 HOH HOH . D 4 HOH A 85 467 88 HOH HOH . D 4 HOH A 86 468 89 HOH HOH . D 4 HOH A 87 469 91 HOH HOH . D 4 HOH A 88 470 92 HOH HOH . D 4 HOH A 89 471 93 HOH HOH . D 4 HOH A 90 472 94 HOH HOH . D 4 HOH A 91 473 95 HOH HOH . D 4 HOH A 92 474 96 HOH HOH . D 4 HOH A 93 475 97 HOH HOH . D 4 HOH A 94 476 98 HOH HOH . D 4 HOH A 95 477 99 HOH HOH . D 4 HOH A 96 478 100 HOH HOH . D 4 HOH A 97 479 101 HOH HOH . D 4 HOH A 98 480 102 HOH HOH . D 4 HOH A 99 481 103 HOH HOH . D 4 HOH A 100 482 104 HOH HOH . D 4 HOH A 101 483 105 HOH HOH . D 4 HOH A 102 484 106 HOH HOH . D 4 HOH A 103 485 107 HOH HOH . D 4 HOH A 104 486 108 HOH HOH . D 4 HOH A 105 487 109 HOH HOH . D 4 HOH A 106 488 110 HOH HOH . D 4 HOH A 107 489 111 HOH HOH . D 4 HOH A 108 490 112 HOH HOH . D 4 HOH A 109 491 113 HOH HOH . D 4 HOH A 110 492 114 HOH HOH . D 4 HOH A 111 493 116 HOH HOH . D 4 HOH A 112 494 117 HOH HOH . D 4 HOH A 113 495 118 HOH HOH . D 4 HOH A 114 496 119 HOH HOH . D 4 HOH A 115 497 120 HOH HOH . D 4 HOH A 116 498 121 HOH HOH . D 4 HOH A 117 499 122 HOH HOH . D 4 HOH A 118 500 123 HOH HOH . D 4 HOH A 119 501 124 HOH HOH . D 4 HOH A 120 502 125 HOH HOH . D 4 HOH A 121 503 126 HOH HOH . D 4 HOH A 122 504 127 HOH HOH . D 4 HOH A 123 505 128 HOH HOH . D 4 HOH A 124 506 129 HOH HOH . D 4 HOH A 125 507 130 HOH HOH . D 4 HOH A 126 508 131 HOH HOH . D 4 HOH A 127 509 132 HOH HOH . D 4 HOH A 128 510 133 HOH HOH . D 4 HOH A 129 511 134 HOH HOH . D 4 HOH A 130 512 135 HOH HOH . D 4 HOH A 131 513 136 HOH HOH . D 4 HOH A 132 514 137 HOH HOH . D 4 HOH A 133 515 138 HOH HOH . D 4 HOH A 134 516 139 HOH HOH . D 4 HOH A 135 517 140 HOH HOH . D 4 HOH A 136 518 141 HOH HOH . D 4 HOH A 137 519 142 HOH HOH . D 4 HOH A 138 520 143 HOH HOH . D 4 HOH A 139 521 144 HOH HOH . D 4 HOH A 140 522 145 HOH HOH . D 4 HOH A 141 523 146 HOH HOH . D 4 HOH A 142 524 147 HOH HOH . D 4 HOH A 143 525 148 HOH HOH . D 4 HOH A 144 526 149 HOH HOH . D 4 HOH A 145 527 150 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -2.091 _atom_site.Cartn_y 27.625 _atom_site.Cartn_z 14.051 _atom_site.occupancy 0.6 _atom_site.B_iso_or_equiv 36.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 382 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #