data_1B3Q # _model_server_result.job_id J42FJ5fopgH6pM4C9aqk0g _model_server_result.datetime_utc '2025-02-21 17:46:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":998}' # _entry.id 1B3Q # _exptl.entry_id 1B3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.6 _cell.angle_gamma 90 _cell.entry_id 1B3Q _cell.length_a 61.8 _cell.length_b 126.5 _cell.length_c 75.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 253 A CYS 545 1_555 C HG HG . A HG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc2 A N ASP 342 A ASP 634 1_555 C HG HG . A HG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.502 ? metalc ? metalc3 A OD1 ASP 342 A ASP 634 1_555 C HG HG . A HG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.41 ? metalc ? metalc4 C HG HG . A HG 998 1_555 E O HOH . A HOH 1159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc5 B SG CYS 253 B CYS 545 1_555 D HG HG . B HG 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.225 ? metalc ? metalc6 B N ASP 341 B ASP 633 1_555 D HG HG . B HG 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.532 ? metalc ? metalc7 B OD1 ASP 342 B ASP 634 1_555 D HG HG . B HG 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.42 ? metalc ? metalc8 D HG HG . B HG 999 1_555 F O HOH . B HOH 1193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1B3Q _atom_sites.fract_transf_matrix[1][1] 0.016181 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001586 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HG A 1 998 998 HG HG . D 2 HG B 1 999 999 HG HG . E 3 HOH A 1 1000 1000 HOH HOH . E 3 HOH A 2 1001 1001 HOH HOH . E 3 HOH A 3 1002 1002 HOH HOH . E 3 HOH A 4 1003 1003 HOH HOH . E 3 HOH A 5 1004 1004 HOH HOH . E 3 HOH A 6 1005 1005 HOH HOH . E 3 HOH A 7 1006 1006 HOH HOH . E 3 HOH A 8 1007 1007 HOH HOH . E 3 HOH A 9 1008 1008 HOH HOH . E 3 HOH A 10 1009 1009 HOH HOH . E 3 HOH A 11 1011 1011 HOH HOH . E 3 HOH A 12 1013 1013 HOH HOH . E 3 HOH A 13 1024 1024 HOH HOH . E 3 HOH A 14 1025 1025 HOH HOH . E 3 HOH A 15 1026 1026 HOH HOH . E 3 HOH A 16 1027 1027 HOH HOH . E 3 HOH A 17 1028 1028 HOH HOH . E 3 HOH A 18 1030 1030 HOH HOH . E 3 HOH A 19 1031 1031 HOH HOH . E 3 HOH A 20 1033 1033 HOH HOH . E 3 HOH A 21 1034 1034 HOH HOH . E 3 HOH A 22 1035 1035 HOH HOH . E 3 HOH A 23 1036 1036 HOH HOH . E 3 HOH A 24 1039 1039 HOH HOH . E 3 HOH A 25 1040 1040 HOH HOH . E 3 HOH A 26 1041 1041 HOH HOH . E 3 HOH A 27 1042 1042 HOH HOH . E 3 HOH A 28 1043 1043 HOH HOH . E 3 HOH A 29 1044 1044 HOH HOH . E 3 HOH A 30 1045 1045 HOH HOH . E 3 HOH A 31 1048 1048 HOH HOH . E 3 HOH A 32 1049 1049 HOH HOH . E 3 HOH A 33 1085 1085 HOH HOH . E 3 HOH A 34 1089 1089 HOH HOH . E 3 HOH A 35 1091 1091 HOH HOH . E 3 HOH A 36 1092 1092 HOH HOH . E 3 HOH A 37 1093 1093 HOH HOH . E 3 HOH A 38 1094 1094 HOH HOH . E 3 HOH A 39 1095 1095 HOH HOH . E 3 HOH A 40 1096 1096 HOH HOH . E 3 HOH A 41 1097 1097 HOH HOH . E 3 HOH A 42 1098 1098 HOH HOH . E 3 HOH A 43 1099 1099 HOH HOH . E 3 HOH A 44 1100 1100 HOH HOH . E 3 HOH A 45 1114 1114 HOH HOH . E 3 HOH A 46 1116 1116 HOH HOH . E 3 HOH A 47 1117 1117 HOH HOH . E 3 HOH A 48 1118 1118 HOH HOH . E 3 HOH A 49 1120 1120 HOH HOH . E 3 HOH A 50 1121 1121 HOH HOH . E 3 HOH A 51 1123 1123 HOH HOH . E 3 HOH A 52 1125 1125 HOH HOH . E 3 HOH A 53 1126 1126 HOH HOH . E 3 HOH A 54 1128 1128 HOH HOH . E 3 HOH A 55 1130 1130 HOH HOH . E 3 HOH A 56 1137 1137 HOH HOH . E 3 HOH A 57 1138 1138 HOH HOH . E 3 HOH A 58 1139 1139 HOH HOH . E 3 HOH A 59 1141 1141 HOH HOH . E 3 HOH A 60 1144 1144 HOH HOH . E 3 HOH A 61 1145 1145 HOH HOH . E 3 HOH A 62 1147 1147 HOH HOH . E 3 HOH A 63 1148 1148 HOH HOH . E 3 HOH A 64 1149 1149 HOH HOH . E 3 HOH A 65 1150 1150 HOH HOH . E 3 HOH A 66 1152 1152 HOH HOH . E 3 HOH A 67 1153 1153 HOH HOH . E 3 HOH A 68 1154 1154 HOH HOH . E 3 HOH A 69 1159 1159 HOH HOH . E 3 HOH A 70 1160 1160 HOH HOH . E 3 HOH A 71 1161 1161 HOH HOH . E 3 HOH A 72 1162 1162 HOH HOH . E 3 HOH A 73 1163 1163 HOH HOH . E 3 HOH A 74 1165 1165 HOH HOH . E 3 HOH A 75 1210 1210 HOH HOH . E 3 HOH A 76 1221 1221 HOH HOH . E 3 HOH A 77 1222 1222 HOH HOH . E 3 HOH A 78 1223 1223 HOH HOH . E 3 HOH A 79 1224 1224 HOH HOH . E 3 HOH A 80 1225 1225 HOH HOH . E 3 HOH A 81 1226 1226 HOH HOH . E 3 HOH A 82 1227 1227 HOH HOH . E 3 HOH A 83 1228 1228 HOH HOH . E 3 HOH A 84 1230 1230 HOH HOH . E 3 HOH A 85 1231 1231 HOH HOH . E 3 HOH A 86 1232 1232 HOH HOH . E 3 HOH A 87 1233 1233 HOH HOH . E 3 HOH A 88 1234 1234 HOH HOH . E 3 HOH A 89 1235 1235 HOH HOH . E 3 HOH A 90 1236 1236 HOH HOH . E 3 HOH A 91 1237 1237 HOH HOH . E 3 HOH A 92 1238 1238 HOH HOH . E 3 HOH A 93 1239 1239 HOH HOH . E 3 HOH A 94 1241 1241 HOH HOH . F 3 HOH B 1 1012 1012 HOH HOH . F 3 HOH B 2 1014 1014 HOH HOH . F 3 HOH B 3 1015 1015 HOH HOH . F 3 HOH B 4 1016 1016 HOH HOH . F 3 HOH B 5 1017 1017 HOH HOH . F 3 HOH B 6 1018 1018 HOH HOH . F 3 HOH B 7 1019 1019 HOH HOH . F 3 HOH B 8 1022 1022 HOH HOH . F 3 HOH B 9 1023 1023 HOH HOH . F 3 HOH B 10 1029 1029 HOH HOH . F 3 HOH B 11 1038 1038 HOH HOH . F 3 HOH B 12 1050 1050 HOH HOH . F 3 HOH B 13 1051 1051 HOH HOH . F 3 HOH B 14 1052 1052 HOH HOH . F 3 HOH B 15 1053 1053 HOH HOH . F 3 HOH B 16 1054 1054 HOH HOH . F 3 HOH B 17 1055 1055 HOH HOH . F 3 HOH B 18 1056 1056 HOH HOH . F 3 HOH B 19 1057 1057 HOH HOH . F 3 HOH B 20 1058 1058 HOH HOH . F 3 HOH B 21 1059 1059 HOH HOH . F 3 HOH B 22 1061 1061 HOH HOH . F 3 HOH B 23 1062 1062 HOH HOH . F 3 HOH B 24 1063 1063 HOH HOH . F 3 HOH B 25 1064 1064 HOH HOH . F 3 HOH B 26 1065 1065 HOH HOH . F 3 HOH B 27 1066 1066 HOH HOH . F 3 HOH B 28 1067 1067 HOH HOH . F 3 HOH B 29 1068 1068 HOH HOH . F 3 HOH B 30 1069 1069 HOH HOH . F 3 HOH B 31 1070 1070 HOH HOH . F 3 HOH B 32 1071 1071 HOH HOH . F 3 HOH B 33 1073 1073 HOH HOH . F 3 HOH B 34 1074 1074 HOH HOH . F 3 HOH B 35 1075 1075 HOH HOH . F 3 HOH B 36 1076 1076 HOH HOH . F 3 HOH B 37 1078 1078 HOH HOH . F 3 HOH B 38 1079 1079 HOH HOH . F 3 HOH B 39 1080 1080 HOH HOH . F 3 HOH B 40 1081 1081 HOH HOH . F 3 HOH B 41 1082 1082 HOH HOH . F 3 HOH B 42 1084 1084 HOH HOH . F 3 HOH B 43 1086 1086 HOH HOH . F 3 HOH B 44 1087 1087 HOH HOH . F 3 HOH B 45 1101 1101 HOH HOH . F 3 HOH B 46 1103 1103 HOH HOH . F 3 HOH B 47 1104 1104 HOH HOH . F 3 HOH B 48 1105 1105 HOH HOH . F 3 HOH B 49 1106 1106 HOH HOH . F 3 HOH B 50 1107 1107 HOH HOH . F 3 HOH B 51 1108 1108 HOH HOH . F 3 HOH B 52 1109 1109 HOH HOH . F 3 HOH B 53 1112 1112 HOH HOH . F 3 HOH B 54 1113 1113 HOH HOH . F 3 HOH B 55 1168 1168 HOH HOH . F 3 HOH B 56 1169 1169 HOH HOH . F 3 HOH B 57 1170 1170 HOH HOH . F 3 HOH B 58 1171 1171 HOH HOH . F 3 HOH B 59 1173 1173 HOH HOH . F 3 HOH B 60 1175 1175 HOH HOH . F 3 HOH B 61 1176 1176 HOH HOH . F 3 HOH B 62 1177 1177 HOH HOH . F 3 HOH B 63 1178 1178 HOH HOH . F 3 HOH B 64 1179 1179 HOH HOH . F 3 HOH B 65 1181 1181 HOH HOH . F 3 HOH B 66 1183 1183 HOH HOH . F 3 HOH B 67 1187 1187 HOH HOH . F 3 HOH B 68 1190 1190 HOH HOH . F 3 HOH B 69 1191 1191 HOH HOH . F 3 HOH B 70 1193 1193 HOH HOH . F 3 HOH B 71 1194 1194 HOH HOH . F 3 HOH B 72 1195 1195 HOH HOH . F 3 HOH B 73 1196 1196 HOH HOH . F 3 HOH B 74 1198 1198 HOH HOH . F 3 HOH B 75 1199 1199 HOH HOH . F 3 HOH B 76 1200 1200 HOH HOH . F 3 HOH B 77 1201 1201 HOH HOH . F 3 HOH B 78 1202 1202 HOH HOH . F 3 HOH B 79 1204 1204 HOH HOH . F 3 HOH B 80 1207 1207 HOH HOH . F 3 HOH B 81 1208 1208 HOH HOH . F 3 HOH B 82 1209 1209 HOH HOH . F 3 HOH B 83 1211 1211 HOH HOH . F 3 HOH B 84 1215 1215 HOH HOH . F 3 HOH B 85 1216 1216 HOH HOH . F 3 HOH B 86 1217 1217 HOH HOH . F 3 HOH B 87 1218 1218 HOH HOH . F 3 HOH B 88 1219 1219 HOH HOH . F 3 HOH B 89 1220 1220 HOH HOH . F 3 HOH B 90 1229 1229 HOH HOH . F 3 HOH B 91 1242 1242 HOH HOH . F 3 HOH B 92 1243 1243 HOH HOH . F 3 HOH B 93 1244 1244 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 28.38 _atom_site.Cartn_y 0.019 _atom_site.Cartn_z 12.099 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 998 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #