data_1B48 # _model_server_result.job_id RQfMPiv0IbiIlIXcRwZlrQ _model_server_result.datetime_utc '2024-11-21 23:08:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b48 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":223}' # _entry.id 1B48 # _exptl.entry_id 1B48 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1B48 _cell.length_a 114.45 _cell.length_b 96.14 _cell.length_c 50.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B48 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 116 n n N1 HN11 GSH sing 117 n n N1 HN12 GSH sing 118 n n CA1 C1 GSH sing 119 n n CA1 CB1 GSH sing 120 n n CA1 HA1 GSH sing 121 n n C1 O11 GSH doub 122 n n C1 O12 GSH sing 123 n n O12 H12 GSH sing 124 n n CB1 CG1 GSH sing 125 n n CB1 HB12 GSH sing 126 n n CB1 HB13 GSH sing 127 n n CG1 CD1 GSH sing 128 n n CG1 HG12 GSH sing 129 n n CG1 HG13 GSH sing 130 n n CD1 OE1 GSH doub 131 n n CD1 N2 GSH sing 132 n n N2 CA2 GSH sing 133 n n N2 HN2 GSH sing 134 n n CA2 C2 GSH sing 135 n n CA2 CB2 GSH sing 136 n n CA2 HA2 GSH sing 137 n n C2 O2 GSH doub 138 n n C2 N3 GSH sing 139 n n CB2 SG2 GSH sing 140 n n CB2 HB22 GSH sing 141 n n CB2 HB23 GSH sing 142 n n SG2 HSG GSH sing 143 n n N3 CA3 GSH sing 144 n n N3 HN3 GSH sing 145 n n CA3 C3 GSH sing 146 n n CA3 HA31 GSH sing 147 n n CA3 HA32 GSH sing 148 n n C3 O31 GSH doub 149 n n C3 O32 GSH sing 150 n n O32 H32 GSH sing 151 n n # _atom_sites.entry_id 1B48 _atom_sites.fract_transf_matrix[1][1] 0.008737 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010401 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HAG A 1 223 223 HAG HAG . D 3 GSH B 1 223 223 GSH GTT . E 4 HOH A 1 301 301 HOH HOH . E 4 HOH A 2 302 302 HOH HOH . E 4 HOH A 3 303 303 HOH HOH . E 4 HOH A 4 304 304 HOH HOH . E 4 HOH A 5 305 305 HOH HOH . E 4 HOH A 6 315 315 HOH HOH . E 4 HOH A 7 318 318 HOH HOH . E 4 HOH A 8 323 323 HOH HOH . E 4 HOH A 9 324 324 HOH HOH . E 4 HOH A 10 326 326 HOH HOH . E 4 HOH A 11 328 328 HOH HOH . E 4 HOH A 12 329 329 HOH HOH . E 4 HOH A 13 330 330 HOH HOH . E 4 HOH A 14 332 332 HOH HOH . E 4 HOH A 15 335 335 HOH HOH . E 4 HOH A 16 336 336 HOH HOH . E 4 HOH A 17 338 338 HOH HOH . E 4 HOH A 18 339 339 HOH HOH . F 4 HOH B 1 306 306 HOH HOH . F 4 HOH B 2 307 307 HOH HOH . F 4 HOH B 3 308 308 HOH HOH . F 4 HOH B 4 309 309 HOH HOH . F 4 HOH B 5 310 310 HOH HOH . F 4 HOH B 6 311 311 HOH HOH . F 4 HOH B 7 312 312 HOH HOH . F 4 HOH B 8 313 313 HOH HOH . F 4 HOH B 9 314 314 HOH HOH . F 4 HOH B 10 316 316 HOH HOH . F 4 HOH B 11 317 317 HOH HOH . F 4 HOH B 12 319 319 HOH HOH . F 4 HOH B 13 320 320 HOH HOH . F 4 HOH B 14 321 321 HOH HOH . F 4 HOH B 15 322 322 HOH HOH . F 4 HOH B 16 325 325 HOH HOH . F 4 HOH B 17 327 327 HOH HOH . F 4 HOH B 18 331 331 HOH HOH . F 4 HOH B 19 333 333 HOH HOH . F 4 HOH B 20 334 334 HOH HOH . F 4 HOH B 21 337 337 HOH HOH . F 4 HOH B 22 340 340 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . D 3 39.807 30.13 23.436 1 39.74 ? N1 GSH 223 B 1 HETATM 2 C CA1 GSH . . . D 3 39.883 31.024 22.15 1 44.96 ? CA1 GSH 223 B 1 HETATM 3 C C1 GSH . . . D 3 40.485 30.246 21.028 1 46.89 ? C1 GSH 223 B 1 HETATM 4 O O11 GSH . . . D 3 40.884 30.635 19.863 1 41.56 ? O11 GSH 223 B 1 HETATM 5 O O12 GSH . . . D 3 40.701 28.885 21.149 1 50.67 ? O12 GSH 223 B 1 HETATM 6 C CB1 GSH . . . D 3 40.83 32.229 22.616 1 43.73 ? CB1 GSH 223 B 1 HETATM 7 C CG1 GSH . . . D 3 40.374 32.726 24.008 1 46.08 ? CG1 GSH 223 B 1 HETATM 8 C CD1 GSH . . . D 3 41.433 33.567 24.705 1 47.82 ? CD1 GSH 223 B 1 HETATM 9 O OE1 GSH . . . D 3 41.487 33.878 25.957 1 44.94 ? OE1 GSH 223 B 1 HETATM 10 N N2 GSH . . . D 3 42.44 34.023 23.868 1 50.87 ? N2 GSH 223 B 1 HETATM 11 C CA2 GSH . . . D 3 43.219 35.175 24.358 1 53.47 ? CA2 GSH 223 B 1 HETATM 12 C C2 GSH . . . D 3 43.102 36.268 23.245 1 56.01 ? C2 GSH 223 B 1 HETATM 13 O O2 GSH . . . D 3 43.246 35.775 22.129 1 47.16 ? O2 GSH 223 B 1 HETATM 14 C CB2 GSH . . . D 3 44.697 34.759 24.547 1 53.49 ? CB2 GSH 223 B 1 HETATM 15 S SG2 GSH . . . D 3 44.835 34.479 26.292 1 50.38 ? SG2 GSH 223 B 1 HETATM 16 N N3 GSH . . . D 3 42.864 37.468 23.738 1 62.8 ? N3 GSH 223 B 1 HETATM 17 C CA3 GSH . . . D 3 41.513 37.898 24.187 1 70.76 ? CA3 GSH 223 B 1 HETATM 18 C C3 GSH . . . D 3 41.018 39.026 23.287 1 74.99 ? C3 GSH 223 B 1 HETATM 19 O O31 GSH . . . D 3 40.674 38.779 22.065 1 74.35 ? O31 GSH 223 B 1 HETATM 20 O O32 GSH . . . D 3 40.984 40.254 23.867 1 75.46 ? O32 GSH 223 B 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #