data_1B4S # _model_server_result.job_id PKlpPyn7UdTar7AL1MRXQA _model_server_result.datetime_utc '2024-10-19 01:34:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":162}' # _entry.id 1B4S # _exptl.entry_id 1B4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1B4S _cell.length_a 70 _cell.length_b 70 _cell.length_c 151.77 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 105 60.621778 50.59 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O1B ADP . A ADP 160 1_555 E MG MG . A MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc2 F O1A ADP . A ADP 160 1_555 E MG MG . A MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc3 D O1 PO4 . A PO4 161 1_555 E MG MG . A MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc4 I O1B ADP . B ADP 160 1_555 H MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc5 I O1A ADP . B ADP 160 1_555 H MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc6 G O2 PO4 . B PO4 161 1_555 H MG MG . B MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc7 H MG MG . B MG 162 1_555 N O HOH . B HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc8 H MG MG . B MG 162 1_555 N O HOH . B HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc9 H MG MG . B MG 162 1_555 N O HOH . B HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? metalc ? metalc10 L O1A ADP . C ADP 160 1_555 K MG MG . C MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc11 L O1B ADP . C ADP 160 1_555 K MG MG . C MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc12 J O1 PO4 . C PO4 161 1_555 K MG MG . C MG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1B4S _atom_sites.fract_transf_matrix[1][1] 0.014286 _atom_sites.fract_transf_matrix[1][2] 0.008248 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016496 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PO4 A 1 161 161 PO4 PO4 . E 3 MG A 1 162 162 MG MG . F 4 ADP A 1 160 160 ADP ADP . G 2 PO4 B 1 161 161 PO4 PO4 . H 3 MG B 1 162 162 MG MG . I 4 ADP B 1 160 160 ADP ADP . J 2 PO4 C 1 161 161 PO4 PO4 . K 3 MG C 1 162 162 MG MG . L 4 ADP C 1 160 160 ADP ADP . M 5 HOH A 1 163 1 HOH HOH . M 5 HOH A 2 164 5 HOH HOH . M 5 HOH A 3 165 6 HOH HOH . M 5 HOH A 4 166 7 HOH HOH . M 5 HOH A 5 167 10 HOH HOH . M 5 HOH A 6 168 12 HOH HOH . M 5 HOH A 7 169 19 HOH HOH . M 5 HOH A 8 170 23 HOH HOH . M 5 HOH A 9 171 24 HOH HOH . M 5 HOH A 10 172 29 HOH HOH . M 5 HOH A 11 173 31 HOH HOH . M 5 HOH A 12 174 33 HOH HOH . M 5 HOH A 13 175 37 HOH HOH . M 5 HOH A 14 176 39 HOH HOH . M 5 HOH A 15 177 45 HOH HOH . M 5 HOH A 16 178 48 HOH HOH . M 5 HOH A 17 179 49 HOH HOH . M 5 HOH A 18 180 50 HOH HOH . M 5 HOH A 19 181 51 HOH HOH . M 5 HOH A 20 182 66 HOH HOH . M 5 HOH A 21 183 67 HOH HOH . M 5 HOH A 22 184 68 HOH HOH . M 5 HOH A 23 185 70 HOH HOH . M 5 HOH A 24 186 71 HOH HOH . M 5 HOH A 25 187 75 HOH HOH . M 5 HOH A 26 188 78 HOH HOH . M 5 HOH A 27 189 81 HOH HOH . M 5 HOH A 28 190 86 HOH HOH . M 5 HOH A 29 191 87 HOH HOH . M 5 HOH A 30 192 90 HOH HOH . M 5 HOH A 31 193 94 HOH HOH . M 5 HOH A 32 194 96 HOH HOH . M 5 HOH A 33 195 100 HOH HOH . M 5 HOH A 34 196 101 HOH HOH . M 5 HOH A 35 197 105 HOH HOH . N 5 HOH B 1 163 3 HOH HOH . N 5 HOH B 2 164 4 HOH HOH . N 5 HOH B 3 165 8 HOH HOH . N 5 HOH B 4 166 13 HOH HOH . N 5 HOH B 5 167 16 HOH HOH . N 5 HOH B 6 168 17 HOH HOH . N 5 HOH B 7 169 18 HOH HOH . N 5 HOH B 8 170 21 HOH HOH . N 5 HOH B 9 171 25 HOH HOH . N 5 HOH B 10 172 30 HOH HOH . N 5 HOH B 11 173 34 HOH HOH . N 5 HOH B 12 174 35 HOH HOH . N 5 HOH B 13 175 40 HOH HOH . N 5 HOH B 14 176 41 HOH HOH . N 5 HOH B 15 177 43 HOH HOH . N 5 HOH B 16 178 44 HOH HOH . N 5 HOH B 17 179 46 HOH HOH . N 5 HOH B 18 180 47 HOH HOH . N 5 HOH B 19 181 52 HOH HOH . N 5 HOH B 20 182 62 HOH HOH . N 5 HOH B 21 183 63 HOH HOH . N 5 HOH B 22 184 65 HOH HOH . N 5 HOH B 23 185 69 HOH HOH . N 5 HOH B 24 186 73 HOH HOH . N 5 HOH B 25 187 77 HOH HOH . N 5 HOH B 26 188 80 HOH HOH . N 5 HOH B 27 189 84 HOH HOH . N 5 HOH B 28 190 85 HOH HOH . N 5 HOH B 29 191 88 HOH HOH . N 5 HOH B 30 192 89 HOH HOH . N 5 HOH B 31 193 91 HOH HOH . N 5 HOH B 32 194 97 HOH HOH . N 5 HOH B 33 195 99 HOH HOH . N 5 HOH B 34 196 103 HOH HOH . N 5 HOH B 35 197 104 HOH HOH . N 5 HOH B 36 198 107 HOH HOH . N 5 HOH B 37 199 110 HOH HOH . N 5 HOH B 38 200 114 HOH HOH . N 5 HOH B 39 201 116 HOH HOH . N 5 HOH B 40 202 119 HOH HOH . N 5 HOH B 41 203 102 HOH HOH . N 5 HOH B 42 204 108 HOH HOH . N 5 HOH B 43 205 111 HOH HOH . O 5 HOH C 1 163 2 HOH HOH . O 5 HOH C 2 164 9 HOH HOH . O 5 HOH C 3 165 11 HOH HOH . O 5 HOH C 4 166 20 HOH HOH . O 5 HOH C 5 167 22 HOH HOH . O 5 HOH C 6 168 27 HOH HOH . O 5 HOH C 7 169 28 HOH HOH . O 5 HOH C 8 170 32 HOH HOH . O 5 HOH C 9 171 36 HOH HOH . O 5 HOH C 10 172 38 HOH HOH . O 5 HOH C 11 173 53 HOH HOH . O 5 HOH C 12 174 60 HOH HOH . O 5 HOH C 13 175 61 HOH HOH . O 5 HOH C 14 176 64 HOH HOH . O 5 HOH C 15 177 72 HOH HOH . O 5 HOH C 16 178 74 HOH HOH . O 5 HOH C 17 179 76 HOH HOH . O 5 HOH C 18 180 79 HOH HOH . O 5 HOH C 19 181 82 HOH HOH . O 5 HOH C 20 182 83 HOH HOH . O 5 HOH C 21 183 92 HOH HOH . O 5 HOH C 22 184 93 HOH HOH . O 5 HOH C 23 185 95 HOH HOH . O 5 HOH C 24 186 98 HOH HOH . O 5 HOH C 25 187 106 HOH HOH . O 5 HOH C 26 188 109 HOH HOH . O 5 HOH C 27 189 113 HOH HOH . O 5 HOH C 28 190 115 HOH HOH . O 5 HOH C 29 191 117 HOH HOH . O 5 HOH C 30 192 121 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 44.513 _atom_site.Cartn_y 2.2 _atom_site.Cartn_z 10.831 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 162 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #