data_1B59
#
_model_server_result.job_id            UOyWk6oRs2yKMoLJcglbgQ 
_model_server_result.datetime_utc      '2024-11-05 14:35:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1b59 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":481}' 
#
_entry.id    1B59 
#
_exptl.entry_id    1B59 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.933 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COBALT (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1B59 
_cell.length_a            89.723 
_cell.length_b            99.108 
_cell.length_c            101.292 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1B59 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 120 A CYS 228 1_555 A SG CYS 340 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
covale ? covale1 A NE2 HIS 123 A HIS 231 1_555 D C11 OVA . A OVA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? 
metalc ? metalc1 A OD1 ASP 143 A ASP 251 1_555 C CO CO . A CO 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc2 A OD2 ASP 143 A ASP 251 1_555 C CO CO . A CO 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc3 A OD2 ASP 154 A ASP 262 1_555 B CO CO . A CO 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? 
metalc ? metalc4 A OD1 ASP 154 A ASP 262 1_555 C CO CO . A CO 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.741 ? 
metalc ? metalc5 A OD2 ASP 154 A ASP 262 1_555 C CO CO . A CO 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? 
metalc ? metalc6 A NE2 HIS 223 A HIS 331 1_555 B CO CO . A CO 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc7 A OE2 GLU 256 A GLU 364 1_555 B CO CO . A CO 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc8 A OE2 GLU 351 A GLU 459 1_555 B CO CO . A CO 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc9 A OE1 GLU 351 A GLU 459 1_555 C CO CO . A CO 482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc10 B CO CO . A CO 481 1_555 E O HOH . A HOH 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc11 C CO CO . A CO 482 1_555 E O HOH . A HOH 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
#
_chem_comp.formula           'Co 2' 
_chem_comp.formula_weight    58.933 
_chem_comp.id                CO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COBALT (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1B59 
_atom_sites.fract_transf_matrix[1][1]    0.011145 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01009 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009872 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CO A 1 481 481 CO CO . 
C 2 CO A 1 482 482 CO CO . 
D 3 OVA A 1 480 480 OVA OVA . 
E 4 HOH A 1 483 1 HOH HOH . 
E 4 HOH A 2 484 2 HOH HOH . 
E 4 HOH A 3 485 3 HOH HOH . 
E 4 HOH A 4 486 4 HOH HOH . 
E 4 HOH A 5 487 5 HOH HOH . 
E 4 HOH A 6 488 6 HOH HOH . 
E 4 HOH A 7 489 7 HOH HOH . 
E 4 HOH A 8 490 8 HOH HOH . 
E 4 HOH A 9 491 9 HOH HOH . 
E 4 HOH A 10 492 10 HOH HOH . 
E 4 HOH A 11 493 11 HOH HOH . 
E 4 HOH A 12 494 12 HOH HOH . 
E 4 HOH A 13 495 13 HOH HOH . 
E 4 HOH A 14 496 14 HOH HOH . 
E 4 HOH A 15 497 15 HOH HOH . 
E 4 HOH A 16 498 16 HOH HOH . 
E 4 HOH A 17 499 17 HOH HOH . 
E 4 HOH A 18 500 18 HOH HOH . 
E 4 HOH A 19 501 19 HOH HOH . 
E 4 HOH A 20 502 20 HOH HOH . 
E 4 HOH A 21 503 21 HOH HOH . 
E 4 HOH A 22 504 22 HOH HOH . 
E 4 HOH A 23 505 23 HOH HOH . 
E 4 HOH A 24 506 24 HOH HOH . 
E 4 HOH A 25 507 25 HOH HOH . 
E 4 HOH A 26 508 26 HOH HOH . 
E 4 HOH A 27 509 27 HOH HOH . 
E 4 HOH A 28 510 28 HOH HOH . 
E 4 HOH A 29 511 29 HOH HOH . 
E 4 HOH A 30 512 30 HOH HOH . 
E 4 HOH A 31 513 32 HOH HOH . 
E 4 HOH A 32 514 33 HOH HOH . 
E 4 HOH A 33 515 34 HOH HOH . 
E 4 HOH A 34 516 35 HOH HOH . 
E 4 HOH A 35 517 37 HOH HOH . 
E 4 HOH A 36 518 38 HOH HOH . 
E 4 HOH A 37 519 39 HOH HOH . 
E 4 HOH A 38 520 40 HOH HOH . 
E 4 HOH A 39 521 41 HOH HOH . 
E 4 HOH A 40 522 42 HOH HOH . 
E 4 HOH A 41 523 43 HOH HOH . 
E 4 HOH A 42 524 44 HOH HOH . 
E 4 HOH A 43 525 45 HOH HOH . 
E 4 HOH A 44 526 46 HOH HOH . 
E 4 HOH A 45 527 47 HOH HOH . 
E 4 HOH A 46 528 48 HOH HOH . 
E 4 HOH A 47 529 49 HOH HOH . 
E 4 HOH A 48 530 50 HOH HOH . 
E 4 HOH A 49 531 51 HOH HOH . 
E 4 HOH A 50 532 52 HOH HOH . 
E 4 HOH A 51 533 53 HOH HOH . 
E 4 HOH A 52 534 54 HOH HOH . 
E 4 HOH A 53 535 56 HOH HOH . 
E 4 HOH A 54 536 57 HOH HOH . 
E 4 HOH A 55 537 58 HOH HOH . 
E 4 HOH A 56 538 59 HOH HOH . 
E 4 HOH A 57 539 60 HOH HOH . 
E 4 HOH A 58 540 61 HOH HOH . 
E 4 HOH A 59 541 62 HOH HOH . 
E 4 HOH A 60 542 63 HOH HOH . 
E 4 HOH A 61 543 64 HOH HOH . 
E 4 HOH A 62 544 65 HOH HOH . 
E 4 HOH A 63 545 66 HOH HOH . 
E 4 HOH A 64 546 67 HOH HOH . 
E 4 HOH A 65 547 68 HOH HOH . 
E 4 HOH A 66 548 69 HOH HOH . 
E 4 HOH A 67 549 70 HOH HOH . 
E 4 HOH A 68 550 71 HOH HOH . 
E 4 HOH A 69 551 72 HOH HOH . 
E 4 HOH A 70 552 73 HOH HOH . 
E 4 HOH A 71 553 74 HOH HOH . 
E 4 HOH A 72 554 75 HOH HOH . 
E 4 HOH A 73 555 76 HOH HOH . 
E 4 HOH A 74 556 77 HOH HOH . 
E 4 HOH A 75 557 78 HOH HOH . 
E 4 HOH A 76 558 79 HOH HOH . 
E 4 HOH A 77 559 80 HOH HOH . 
E 4 HOH A 78 560 81 HOH HOH . 
E 4 HOH A 79 561 82 HOH HOH . 
E 4 HOH A 80 562 83 HOH HOH . 
E 4 HOH A 81 563 84 HOH HOH . 
E 4 HOH A 82 564 85 HOH HOH . 
E 4 HOH A 83 565 86 HOH HOH . 
E 4 HOH A 84 566 87 HOH HOH . 
E 4 HOH A 85 567 90 HOH HOH . 
E 4 HOH A 86 568 91 HOH HOH . 
E 4 HOH A 87 569 92 HOH HOH . 
E 4 HOH A 88 570 93 HOH HOH . 
E 4 HOH A 89 571 94 HOH HOH . 
E 4 HOH A 90 572 95 HOH HOH . 
E 4 HOH A 91 573 96 HOH HOH . 
E 4 HOH A 92 574 97 HOH HOH . 
E 4 HOH A 93 575 98 HOH HOH . 
E 4 HOH A 94 576 99 HOH HOH . 
E 4 HOH A 95 577 100 HOH HOH . 
E 4 HOH A 96 578 101 HOH HOH . 
E 4 HOH A 97 579 102 HOH HOH . 
E 4 HOH A 98 580 103 HOH HOH . 
E 4 HOH A 99 581 104 HOH HOH . 
E 4 HOH A 100 582 105 HOH HOH . 
E 4 HOH A 101 583 106 HOH HOH . 
E 4 HOH A 102 584 107 HOH HOH . 
E 4 HOH A 103 585 108 HOH HOH . 
E 4 HOH A 104 586 109 HOH HOH . 
E 4 HOH A 105 587 110 HOH HOH . 
E 4 HOH A 106 588 111 HOH HOH . 
E 4 HOH A 107 589 112 HOH HOH . 
E 4 HOH A 108 590 113 HOH HOH . 
E 4 HOH A 109 591 114 HOH HOH . 
E 4 HOH A 110 592 116 HOH HOH . 
E 4 HOH A 111 593 118 HOH HOH . 
E 4 HOH A 112 594 119 HOH HOH . 
E 4 HOH A 113 595 120 HOH HOH . 
E 4 HOH A 114 596 121 HOH HOH . 
E 4 HOH A 115 597 122 HOH HOH . 
E 4 HOH A 116 598 123 HOH HOH . 
E 4 HOH A 117 599 124 HOH HOH . 
E 4 HOH A 118 600 125 HOH HOH . 
E 4 HOH A 119 601 126 HOH HOH . 
E 4 HOH A 120 602 127 HOH HOH . 
E 4 HOH A 121 603 128 HOH HOH . 
E 4 HOH A 122 604 129 HOH HOH . 
E 4 HOH A 123 605 130 HOH HOH . 
E 4 HOH A 124 606 131 HOH HOH . 
E 4 HOH A 125 607 132 HOH HOH . 
E 4 HOH A 126 608 133 HOH HOH . 
E 4 HOH A 127 609 134 HOH HOH . 
E 4 HOH A 128 610 135 HOH HOH . 
E 4 HOH A 129 611 136 HOH HOH . 
E 4 HOH A 130 612 137 HOH HOH . 
E 4 HOH A 131 613 138 HOH HOH . 
E 4 HOH A 132 614 139 HOH HOH . 
E 4 HOH A 133 615 140 HOH HOH . 
E 4 HOH A 134 616 141 HOH HOH . 
E 4 HOH A 135 617 142 HOH HOH . 
E 4 HOH A 136 618 143 HOH HOH . 
E 4 HOH A 137 619 144 HOH HOH . 
E 4 HOH A 138 620 145 HOH HOH . 
E 4 HOH A 139 621 146 HOH HOH . 
E 4 HOH A 140 622 147 HOH HOH . 
E 4 HOH A 141 623 148 HOH HOH . 
E 4 HOH A 142 624 149 HOH HOH . 
E 4 HOH A 143 625 150 HOH HOH . 
E 4 HOH A 144 626 151 HOH HOH . 
E 4 HOH A 145 627 152 HOH HOH . 
E 4 HOH A 146 628 153 HOH HOH . 
E 4 HOH A 147 629 154 HOH HOH . 
E 4 HOH A 148 630 155 HOH HOH . 
E 4 HOH A 149 631 156 HOH HOH . 
E 4 HOH A 150 632 157 HOH HOH . 
E 4 HOH A 151 633 158 HOH HOH . 
E 4 HOH A 152 634 159 HOH HOH . 
E 4 HOH A 153 635 160 HOH HOH . 
E 4 HOH A 154 636 161 HOH HOH . 
E 4 HOH A 155 637 162 HOH HOH . 
E 4 HOH A 156 638 163 HOH HOH . 
E 4 HOH A 157 639 164 HOH HOH . 
E 4 HOH A 158 640 165 HOH HOH . 
E 4 HOH A 159 641 166 HOH HOH . 
E 4 HOH A 160 642 167 HOH HOH . 
E 4 HOH A 161 643 168 HOH HOH . 
E 4 HOH A 162 644 169 HOH HOH . 
E 4 HOH A 163 645 170 HOH HOH . 
E 4 HOH A 164 646 171 HOH HOH . 
E 4 HOH A 165 647 172 HOH HOH . 
E 4 HOH A 166 648 173 HOH HOH . 
E 4 HOH A 167 649 174 HOH HOH . 
E 4 HOH A 168 650 175 HOH HOH . 
E 4 HOH A 169 651 176 HOH HOH . 
E 4 HOH A 170 652 177 HOH HOH . 
E 4 HOH A 171 653 178 HOH HOH . 
E 4 HOH A 172 654 179 HOH HOH . 
E 4 HOH A 173 655 180 HOH HOH . 
E 4 HOH A 174 656 181 HOH HOH . 
E 4 HOH A 175 657 182 HOH HOH . 
E 4 HOH A 176 658 183 HOH HOH . 
E 4 HOH A 177 659 184 HOH HOH . 
E 4 HOH A 178 660 185 HOH HOH . 
E 4 HOH A 179 661 186 HOH HOH . 
E 4 HOH A 180 662 187 HOH HOH . 
E 4 HOH A 181 663 188 HOH HOH . 
E 4 HOH A 182 664 189 HOH HOH . 
E 4 HOH A 183 665 190 HOH HOH . 
E 4 HOH A 184 666 191 HOH HOH . 
E 4 HOH A 185 667 192 HOH HOH . 
E 4 HOH A 186 668 194 HOH HOH . 
E 4 HOH A 187 669 195 HOH HOH . 
E 4 HOH A 188 670 197 HOH HOH . 
E 4 HOH A 189 671 198 HOH HOH . 
E 4 HOH A 190 672 199 HOH HOH . 
E 4 HOH A 191 673 200 HOH HOH . 
E 4 HOH A 192 674 201 HOH HOH . 
E 4 HOH A 193 675 202 HOH HOH . 
E 4 HOH A 194 676 203 HOH HOH . 
E 4 HOH A 195 677 204 HOH HOH . 
E 4 HOH A 196 678 206 HOH HOH . 
E 4 HOH A 197 679 207 HOH HOH . 
E 4 HOH A 198 680 208 HOH HOH . 
E 4 HOH A 199 681 209 HOH HOH . 
E 4 HOH A 200 682 210 HOH HOH . 
E 4 HOH A 201 683 211 HOH HOH . 
E 4 HOH A 202 684 212 HOH HOH . 
E 4 HOH A 203 685 213 HOH HOH . 
E 4 HOH A 204 686 215 HOH HOH . 
E 4 HOH A 205 687 216 HOH HOH . 
E 4 HOH A 206 688 217 HOH HOH . 
E 4 HOH A 207 689 218 HOH HOH . 
E 4 HOH A 208 690 219 HOH HOH . 
E 4 HOH A 209 691 220 HOH HOH . 
E 4 HOH A 210 692 221 HOH HOH . 
E 4 HOH A 211 693 222 HOH HOH . 
E 4 HOH A 212 694 223 HOH HOH . 
E 4 HOH A 213 695 193 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CO 
_atom_site.label_atom_id         CO 
_atom_site.label_comp_id         CO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               18.405 
_atom_site.Cartn_y               25.303 
_atom_site.Cartn_z               16.494 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        48.98 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CO 
_atom_site.auth_comp_id          CO 
_atom_site.auth_seq_id           481 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              84 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#