data_1B5G
#
_model_server_result.job_id            C7gHFEbQTUY2OLJhtxkjgA 
_model_server_result.datetime_utc      '2024-12-27 01:15:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1b5g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":391}' 
#
_entry.id    1B5G 
#
_exptl.entry_id    1B5G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.9 
_cell.angle_gamma         90 
_cell.entry_id            1B5G 
_cell.length_a            70.84 
_cell.length_b            72.08 
_cell.length_c            73 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1B5G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? 
disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
covale ? covale1 C C GLU 10 I GLU 62 1_555 C N TYS 11 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale2 C C TYS 11 I TYS 63 1_555 C N LEU 12 I LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
metalc ? metalc1 B O LYS 174 H LYS 169 1_555 F NA NA . H NA 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc2 B O THR 177 H THR 172 1_555 F NA NA . H NA 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? 
metalc ? metalc3 B O PHE 215 H PHE 204 4_546 F NA NA . H NA 392 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc4 B O ARG 233 H ARG 221 1_555 E NA NA . H NA 391 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc5 B O LYS 236 H LYS 224 1_555 E NA NA . H NA 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc6 E NA NA . H NA 391 1_555 H O HOH . H HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? 
metalc ? metalc7 F NA NA . H NA 392 1_555 H O HOH . H HOH 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? 
metalc ? metalc8 F NA NA . H NA 392 1_555 H O HOH . H HOH 476 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1B5G 
_atom_sites.fract_transf_matrix[1][1]    0.014116 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002718 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013873 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01395 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 0ZE H 1 372 372 0ZE 0ZE . 
E 5 NA H 1 391 391 NA NA . 
F 5 NA H 1 392 392 NA NA . 
G 6 HOH L 1 420 420 HOH HOH . 
G 6 HOH L 2 437 437 HOH HOH . 
G 6 HOH L 3 445 445 HOH HOH . 
G 6 HOH L 4 456 456 HOH HOH . 
G 6 HOH L 5 467 467 HOH HOH . 
G 6 HOH L 6 469 469 HOH HOH . 
G 6 HOH L 7 480 480 HOH HOH . 
G 6 HOH L 8 482 482 HOH HOH . 
G 6 HOH L 9 486 486 HOH HOH . 
G 6 HOH L 10 503 503 HOH HOH . 
G 6 HOH L 11 515 515 HOH HOH . 
H 6 HOH H 1 401 401 HOH HOH . 
H 6 HOH H 2 402 402 HOH HOH . 
H 6 HOH H 3 403 403 HOH HOH . 
H 6 HOH H 4 404 404 HOH HOH . 
H 6 HOH H 5 405 405 HOH HOH . 
H 6 HOH H 6 406 406 HOH HOH . 
H 6 HOH H 7 407 407 HOH HOH . 
H 6 HOH H 8 408 408 HOH HOH . 
H 6 HOH H 9 409 409 HOH HOH . 
H 6 HOH H 10 410 410 HOH HOH . 
H 6 HOH H 11 411 411 HOH HOH . 
H 6 HOH H 12 412 412 HOH HOH . 
H 6 HOH H 13 413 413 HOH HOH . 
H 6 HOH H 14 414 414 HOH HOH . 
H 6 HOH H 15 415 415 HOH HOH . 
H 6 HOH H 16 416 416 HOH HOH . 
H 6 HOH H 17 417 417 HOH HOH . 
H 6 HOH H 18 418 418 HOH HOH . 
H 6 HOH H 19 419 419 HOH HOH . 
H 6 HOH H 20 421 421 HOH HOH . 
H 6 HOH H 21 422 422 HOH HOH . 
H 6 HOH H 22 423 423 HOH HOH . 
H 6 HOH H 23 425 425 HOH HOH . 
H 6 HOH H 24 427 427 HOH HOH . 
H 6 HOH H 25 428 428 HOH HOH . 
H 6 HOH H 26 429 429 HOH HOH . 
H 6 HOH H 27 431 431 HOH HOH . 
H 6 HOH H 28 432 432 HOH HOH . 
H 6 HOH H 29 433 433 HOH HOH . 
H 6 HOH H 30 434 434 HOH HOH . 
H 6 HOH H 31 435 435 HOH HOH . 
H 6 HOH H 32 436 436 HOH HOH . 
H 6 HOH H 33 438 438 HOH HOH . 
H 6 HOH H 34 439 439 HOH HOH . 
H 6 HOH H 35 440 440 HOH HOH . 
H 6 HOH H 36 441 441 HOH HOH . 
H 6 HOH H 37 442 442 HOH HOH . 
H 6 HOH H 38 443 443 HOH HOH . 
H 6 HOH H 39 444 444 HOH HOH . 
H 6 HOH H 40 447 447 HOH HOH . 
H 6 HOH H 41 449 449 HOH HOH . 
H 6 HOH H 42 450 450 HOH HOH . 
H 6 HOH H 43 451 451 HOH HOH . 
H 6 HOH H 44 452 452 HOH HOH . 
H 6 HOH H 45 453 453 HOH HOH . 
H 6 HOH H 46 454 454 HOH HOH . 
H 6 HOH H 47 455 455 HOH HOH . 
H 6 HOH H 48 457 457 HOH HOH . 
H 6 HOH H 49 458 458 HOH HOH . 
H 6 HOH H 50 459 459 HOH HOH . 
H 6 HOH H 51 460 460 HOH HOH . 
H 6 HOH H 52 461 461 HOH HOH . 
H 6 HOH H 53 463 463 HOH HOH . 
H 6 HOH H 54 465 465 HOH HOH . 
H 6 HOH H 55 466 466 HOH HOH . 
H 6 HOH H 56 468 468 HOH HOH . 
H 6 HOH H 57 470 470 HOH HOH . 
H 6 HOH H 58 471 471 HOH HOH . 
H 6 HOH H 59 472 472 HOH HOH . 
H 6 HOH H 60 473 473 HOH HOH . 
H 6 HOH H 61 474 474 HOH HOH . 
H 6 HOH H 62 475 475 HOH HOH . 
H 6 HOH H 63 476 476 HOH HOH . 
H 6 HOH H 64 477 477 HOH HOH . 
H 6 HOH H 65 478 478 HOH HOH . 
H 6 HOH H 66 479 479 HOH HOH . 
H 6 HOH H 67 481 481 HOH HOH . 
H 6 HOH H 68 484 484 HOH HOH . 
H 6 HOH H 69 485 485 HOH HOH . 
H 6 HOH H 70 488 488 HOH HOH . 
H 6 HOH H 71 489 489 HOH HOH . 
H 6 HOH H 72 490 490 HOH HOH . 
H 6 HOH H 73 491 491 HOH HOH . 
H 6 HOH H 74 492 492 HOH HOH . 
H 6 HOH H 75 493 493 HOH HOH . 
H 6 HOH H 76 494 494 HOH HOH . 
H 6 HOH H 77 495 495 HOH HOH . 
H 6 HOH H 78 497 497 HOH HOH . 
H 6 HOH H 79 498 498 HOH HOH . 
H 6 HOH H 80 499 499 HOH HOH . 
H 6 HOH H 81 500 500 HOH HOH . 
H 6 HOH H 82 501 501 HOH HOH . 
H 6 HOH H 83 502 502 HOH HOH . 
H 6 HOH H 84 504 504 HOH HOH . 
H 6 HOH H 85 505 505 HOH HOH . 
H 6 HOH H 86 506 506 HOH HOH . 
H 6 HOH H 87 507 507 HOH HOH . 
H 6 HOH H 88 508 508 HOH HOH . 
H 6 HOH H 89 509 509 HOH HOH . 
H 6 HOH H 90 510 510 HOH HOH . 
H 6 HOH H 91 511 511 HOH HOH . 
H 6 HOH H 92 512 512 HOH HOH . 
H 6 HOH H 93 513 513 HOH HOH . 
H 6 HOH H 94 514 514 HOH HOH . 
H 6 HOH H 95 516 516 HOH HOH . 
H 6 HOH H 96 517 517 HOH HOH . 
H 6 HOH H 97 518 518 HOH HOH . 
H 6 HOH H 98 519 519 HOH HOH . 
H 6 HOH H 99 520 520 HOH HOH . 
H 6 HOH H 100 521 521 HOH HOH . 
H 6 HOH H 101 522 522 HOH HOH . 
H 6 HOH H 102 524 524 HOH HOH . 
H 6 HOH H 103 525 525 HOH HOH . 
H 6 HOH H 104 526 526 HOH HOH . 
H 6 HOH H 105 527 527 HOH HOH . 
H 6 HOH H 106 528 528 HOH HOH . 
H 6 HOH H 107 529 529 HOH HOH . 
H 6 HOH H 108 530 530 HOH HOH . 
H 6 HOH H 109 531 531 HOH HOH . 
H 6 HOH H 110 532 532 HOH HOH . 
H 6 HOH H 111 533 533 HOH HOH . 
H 6 HOH H 112 534 534 HOH HOH . 
H 6 HOH H 113 535 535 HOH HOH . 
H 6 HOH H 114 537 537 HOH HOH . 
H 6 HOH H 115 538 538 HOH HOH . 
H 6 HOH H 116 539 539 HOH HOH . 
H 6 HOH H 117 540 540 HOH HOH . 
I 6 HOH I 1 446 446 HOH HOH . 
I 6 HOH I 2 462 462 HOH HOH . 
I 6 HOH I 3 496 496 HOH HOH . 
I 6 HOH I 4 523 523 HOH HOH . 
I 6 HOH I 5 536 536 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               5.595 
_atom_site.Cartn_y               -13.985 
_atom_site.Cartn_z               30.729 
_atom_site.occupancy             0.75 
_atom_site.B_iso_or_equiv        17.67 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           391 
_atom_site.auth_asym_id          H 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           554 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#