data_1B5V
#
_model_server_result.job_id            aqPv9DWAzuYEwzoIMyb2PA 
_model_server_result.datetime_utc      '2024-11-29 17:22:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1b5v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":132}' 
#
_entry.id    1B5V 
#
_exptl.entry_id    1B5V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1B5V 
_cell.length_a            56.69 
_cell.length_b            60.79 
_cell.length_c            33.68 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1B5V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 116 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf3 A SG CYS 65 A CYS 65 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 A SG CYS 77 A CYS 77 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc1 A O CYS 65 A CYS 65 1_554 B NA NA . A NA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc2 A O VAL 74 A VAL 74 1_554 B NA NA . A NA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1B5V 
_atom_sites.fract_transf_matrix[1][1]    0.01764 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01645 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029691 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 132 132 NA NA . 
C 3 CL A 1 133 133 CL CL . 
D 3 CL A 1 246 246 CL CL . 
E 4 HOH A 1 134 134 HOH HOH . 
E 4 HOH A 2 135 135 HOH HOH . 
E 4 HOH A 3 136 136 HOH HOH . 
E 4 HOH A 4 137 137 HOH HOH . 
E 4 HOH A 5 138 138 HOH HOH . 
E 4 HOH A 6 139 139 HOH HOH . 
E 4 HOH A 7 140 140 HOH HOH . 
E 4 HOH A 8 141 141 HOH HOH . 
E 4 HOH A 9 142 142 HOH HOH . 
E 4 HOH A 10 143 143 HOH HOH . 
E 4 HOH A 11 144 144 HOH HOH . 
E 4 HOH A 12 145 145 HOH HOH . 
E 4 HOH A 13 146 146 HOH HOH . 
E 4 HOH A 14 147 147 HOH HOH . 
E 4 HOH A 15 148 148 HOH HOH . 
E 4 HOH A 16 149 149 HOH HOH . 
E 4 HOH A 17 150 150 HOH HOH . 
E 4 HOH A 18 151 151 HOH HOH . 
E 4 HOH A 19 152 152 HOH HOH . 
E 4 HOH A 20 153 153 HOH HOH . 
E 4 HOH A 21 154 154 HOH HOH . 
E 4 HOH A 22 155 155 HOH HOH . 
E 4 HOH A 23 156 156 HOH HOH . 
E 4 HOH A 24 157 157 HOH HOH . 
E 4 HOH A 25 158 158 HOH HOH . 
E 4 HOH A 26 159 159 HOH HOH . 
E 4 HOH A 27 160 160 HOH HOH . 
E 4 HOH A 28 161 161 HOH HOH . 
E 4 HOH A 29 162 162 HOH HOH . 
E 4 HOH A 30 163 163 HOH HOH . 
E 4 HOH A 31 164 164 HOH HOH . 
E 4 HOH A 32 165 165 HOH HOH . 
E 4 HOH A 33 166 166 HOH HOH . 
E 4 HOH A 34 167 167 HOH HOH . 
E 4 HOH A 35 168 168 HOH HOH . 
E 4 HOH A 36 169 169 HOH HOH . 
E 4 HOH A 37 170 170 HOH HOH . 
E 4 HOH A 38 171 171 HOH HOH . 
E 4 HOH A 39 172 172 HOH HOH . 
E 4 HOH A 40 173 173 HOH HOH . 
E 4 HOH A 41 174 174 HOH HOH . 
E 4 HOH A 42 175 175 HOH HOH . 
E 4 HOH A 43 176 176 HOH HOH . 
E 4 HOH A 44 177 177 HOH HOH . 
E 4 HOH A 45 178 178 HOH HOH . 
E 4 HOH A 46 179 179 HOH HOH . 
E 4 HOH A 47 180 180 HOH HOH . 
E 4 HOH A 48 181 181 HOH HOH . 
E 4 HOH A 49 182 182 HOH HOH . 
E 4 HOH A 50 183 183 HOH HOH . 
E 4 HOH A 51 184 184 HOH HOH . 
E 4 HOH A 52 185 185 HOH HOH . 
E 4 HOH A 53 186 186 HOH HOH . 
E 4 HOH A 54 187 187 HOH HOH . 
E 4 HOH A 55 188 188 HOH HOH . 
E 4 HOH A 56 189 189 HOH HOH . 
E 4 HOH A 57 190 190 HOH HOH . 
E 4 HOH A 58 191 191 HOH HOH . 
E 4 HOH A 59 192 192 HOH HOH . 
E 4 HOH A 60 193 193 HOH HOH . 
E 4 HOH A 61 194 194 HOH HOH . 
E 4 HOH A 62 195 195 HOH HOH . 
E 4 HOH A 63 196 196 HOH HOH . 
E 4 HOH A 64 198 198 HOH HOH . 
E 4 HOH A 65 202 202 HOH HOH . 
E 4 HOH A 66 203 203 HOH HOH . 
E 4 HOH A 67 204 204 HOH HOH . 
E 4 HOH A 68 205 205 HOH HOH . 
E 4 HOH A 69 206 206 HOH HOH . 
E 4 HOH A 70 207 207 HOH HOH . 
E 4 HOH A 71 208 208 HOH HOH . 
E 4 HOH A 72 209 209 HOH HOH . 
E 4 HOH A 73 210 210 HOH HOH . 
E 4 HOH A 74 211 211 HOH HOH . 
E 4 HOH A 75 212 212 HOH HOH . 
E 4 HOH A 76 213 213 HOH HOH . 
E 4 HOH A 77 214 214 HOH HOH . 
E 4 HOH A 78 215 215 HOH HOH . 
E 4 HOH A 79 216 216 HOH HOH . 
E 4 HOH A 80 217 217 HOH HOH . 
E 4 HOH A 81 219 219 HOH HOH . 
E 4 HOH A 82 220 220 HOH HOH . 
E 4 HOH A 83 221 221 HOH HOH . 
E 4 HOH A 84 222 222 HOH HOH . 
E 4 HOH A 85 223 223 HOH HOH . 
E 4 HOH A 86 224 224 HOH HOH . 
E 4 HOH A 87 225 225 HOH HOH . 
E 4 HOH A 88 226 226 HOH HOH . 
E 4 HOH A 89 227 227 HOH HOH . 
E 4 HOH A 90 229 229 HOH HOH . 
E 4 HOH A 91 230 230 HOH HOH . 
E 4 HOH A 92 231 231 HOH HOH . 
E 4 HOH A 93 232 232 HOH HOH . 
E 4 HOH A 94 233 233 HOH HOH . 
E 4 HOH A 95 234 234 HOH HOH . 
E 4 HOH A 96 235 235 HOH HOH . 
E 4 HOH A 97 237 237 HOH HOH . 
E 4 HOH A 98 238 238 HOH HOH . 
E 4 HOH A 99 239 239 HOH HOH . 
E 4 HOH A 100 241 241 HOH HOH . 
E 4 HOH A 101 242 242 HOH HOH . 
E 4 HOH A 102 244 244 HOH HOH . 
E 4 HOH A 103 245 245 HOH HOH . 
E 4 HOH A 104 247 247 HOH HOH . 
E 4 HOH A 105 248 248 HOH HOH . 
E 4 HOH A 106 249 249 HOH HOH . 
E 4 HOH A 107 250 250 HOH HOH . 
E 4 HOH A 108 251 251 HOH HOH . 
E 4 HOH A 109 252 252 HOH HOH . 
E 4 HOH A 110 253 253 HOH HOH . 
E 4 HOH A 111 254 254 HOH HOH . 
E 4 HOH A 112 256 256 HOH HOH . 
E 4 HOH A 113 257 257 HOH HOH . 
E 4 HOH A 114 258 258 HOH HOH . 
E 4 HOH A 115 259 259 HOH HOH . 
E 4 HOH A 116 260 260 HOH HOH . 
E 4 HOH A 117 261 261 HOH HOH . 
E 4 HOH A 118 262 262 HOH HOH . 
E 4 HOH A 119 263 263 HOH HOH . 
E 4 HOH A 120 264 264 HOH HOH . 
E 4 HOH A 121 265 265 HOH HOH . 
E 4 HOH A 122 266 266 HOH HOH . 
E 4 HOH A 123 268 268 HOH HOH . 
E 4 HOH A 124 270 270 HOH HOH . 
E 4 HOH A 125 271 271 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               7.028 
_atom_site.Cartn_y               7.591 
_atom_site.Cartn_z               7.176 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.67 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           132 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#