data_1B66 # _model_server_result.job_id k6P2iPdRPbAD9S5QGUzkfA _model_server_result.datetime_utc '2024-11-27 04:41:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b66 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":402}' # _entry.id 1B66 # _exptl.entry_id 1B66 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1B66 _cell.length_a 120.27 _cell.length_b 120.27 _cell.length_c 61.25 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B66 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS hexameric 6 author_and_software_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 PISA trimeric 3 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1,2,3 B,E,F,H 1 4,5,6 A,C,D,G 2 1,2,3 B,E,F,H 3 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 120.27 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 60.135 104.156875 0 4 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 0 0 -61.25 5 'crystal symmetry operation' 2_654 -y+1,x-y,z-1 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 120.27 0 -61.25 6 'crystal symmetry operation' 3_664 -x+y+1,-x+1,z-1 -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 60.135 104.156875 -61.25 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 19 A HIS 23 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc2 A NE2 HIS 44 A HIS 48 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc3 A NE2 HIS 46 A HIS 50 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc4 C ZN ZN . A ZN 401 1_555 D O9 BIO . A BIO 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc5 C ZN ZN . A ZN 401 1_555 D O10 BIO . A BIO 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc6 B NE2 HIS 19 B HIS 23 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc7 B NE2 HIS 44 B HIS 48 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc8 B NE2 HIS 46 B HIS 50 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1B66 _atom_sites.fract_transf_matrix[1][1] 0.008315 _atom_sites.fract_transf_matrix[1][2] 0.0048 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 401 ZN ZN . D 3 BIO A 1 700 700 BIO BIO . E 2 ZN B 1 402 402 ZN ZN . F 3 BIO B 1 701 701 BIO BIO . G 4 HOH A 1 701 15 HOH HOH . G 4 HOH A 2 702 32 HOH HOH . G 4 HOH A 3 703 33 HOH HOH . G 4 HOH A 4 704 37 HOH HOH . G 4 HOH A 5 705 42 HOH HOH . G 4 HOH A 6 706 45 HOH HOH . G 4 HOH A 7 707 58 HOH HOH . G 4 HOH A 8 708 72 HOH HOH . G 4 HOH A 9 709 73 HOH HOH . G 4 HOH A 10 710 82 HOH HOH . G 4 HOH A 11 711 83 HOH HOH . G 4 HOH A 12 712 84 HOH HOH . G 4 HOH A 13 713 85 HOH HOH . G 4 HOH A 14 714 87 HOH HOH . G 4 HOH A 15 715 95 HOH HOH . G 4 HOH A 16 716 98 HOH HOH . G 4 HOH A 17 717 3 HOH HOH . G 4 HOH A 18 718 4 HOH HOH . G 4 HOH A 19 719 7 HOH HOH . G 4 HOH A 20 720 8 HOH HOH . G 4 HOH A 21 721 11 HOH HOH . G 4 HOH A 22 722 12 HOH HOH . G 4 HOH A 23 723 13 HOH HOH . G 4 HOH A 24 724 16 HOH HOH . G 4 HOH A 25 725 19 HOH HOH . G 4 HOH A 26 726 20 HOH HOH . G 4 HOH A 27 727 24 HOH HOH . G 4 HOH A 28 728 27 HOH HOH . G 4 HOH A 29 729 33 HOH HOH . G 4 HOH A 30 730 34 HOH HOH . G 4 HOH A 31 731 37 HOH HOH . G 4 HOH A 32 732 38 HOH HOH . G 4 HOH A 33 733 40 HOH HOH . G 4 HOH A 34 734 44 HOH HOH . G 4 HOH A 35 735 45 HOH HOH . G 4 HOH A 36 736 48 HOH HOH . G 4 HOH A 37 737 49 HOH HOH . G 4 HOH A 38 738 53 HOH HOH . G 4 HOH A 39 739 54 HOH HOH . G 4 HOH A 40 740 56 HOH HOH . G 4 HOH A 41 741 59 HOH HOH . G 4 HOH A 42 742 60 HOH HOH . G 4 HOH A 43 743 62 HOH HOH . G 4 HOH A 44 744 63 HOH HOH . G 4 HOH A 45 745 64 HOH HOH . G 4 HOH A 46 746 66 HOH HOH . G 4 HOH A 47 747 69 HOH HOH . G 4 HOH A 48 748 73 HOH HOH . G 4 HOH A 49 749 74 HOH HOH . G 4 HOH A 50 750 75 HOH HOH . G 4 HOH A 51 751 77 HOH HOH . G 4 HOH A 52 752 79 HOH HOH . G 4 HOH A 53 753 82 HOH HOH . G 4 HOH A 54 754 83 HOH HOH . G 4 HOH A 55 755 84 HOH HOH . G 4 HOH A 56 756 86 HOH HOH . G 4 HOH A 57 757 87 HOH HOH . G 4 HOH A 58 758 93 HOH HOH . G 4 HOH A 59 759 94 HOH HOH . G 4 HOH A 60 760 96 HOH HOH . G 4 HOH A 61 761 98 HOH HOH . G 4 HOH A 62 762 99 HOH HOH . G 4 HOH A 63 763 101 HOH HOH . G 4 HOH A 64 764 102 HOH HOH . G 4 HOH A 65 765 105 HOH HOH . G 4 HOH A 66 766 106 HOH HOH . G 4 HOH A 67 767 107 HOH HOH . G 4 HOH A 68 768 108 HOH HOH . G 4 HOH A 69 769 110 HOH HOH . G 4 HOH A 70 770 112 HOH HOH . G 4 HOH A 71 771 117 HOH HOH . G 4 HOH A 72 772 118 HOH HOH . G 4 HOH A 73 773 124 HOH HOH . G 4 HOH A 74 774 125 HOH HOH . G 4 HOH A 75 775 126 HOH HOH . G 4 HOH A 76 776 128 HOH HOH . G 4 HOH A 77 777 129 HOH HOH . G 4 HOH A 78 778 131 HOH HOH . G 4 HOH A 79 779 134 HOH HOH . G 4 HOH A 80 780 135 HOH HOH . G 4 HOH A 81 781 138 HOH HOH . G 4 HOH A 82 782 144 HOH HOH . G 4 HOH A 83 783 145 HOH HOH . G 4 HOH A 84 784 150 HOH HOH . G 4 HOH A 85 785 153 HOH HOH . G 4 HOH A 86 786 161 HOH HOH . G 4 HOH A 87 787 164 HOH HOH . G 4 HOH A 88 788 165 HOH HOH . G 4 HOH A 89 789 172 HOH HOH . G 4 HOH A 90 790 175 HOH HOH . G 4 HOH A 91 791 176 HOH HOH . G 4 HOH A 92 792 178 HOH HOH . G 4 HOH A 93 793 184 HOH HOH . G 4 HOH A 94 794 185 HOH HOH . G 4 HOH A 95 795 186 HOH HOH . G 4 HOH A 96 796 191 HOH HOH . G 4 HOH A 97 797 192 HOH HOH . G 4 HOH A 98 798 194 HOH HOH . G 4 HOH A 99 799 196 HOH HOH . G 4 HOH A 100 800 204 HOH HOH . G 4 HOH A 101 801 205 HOH HOH . G 4 HOH A 102 802 206 HOH HOH . G 4 HOH A 103 803 212 HOH HOH . G 4 HOH A 104 804 213 HOH HOH . G 4 HOH A 105 805 214 HOH HOH . G 4 HOH A 106 806 215 HOH HOH . G 4 HOH A 107 807 217 HOH HOH . G 4 HOH A 108 808 224 HOH HOH . G 4 HOH A 109 809 228 HOH HOH . G 4 HOH A 110 810 233 HOH HOH . G 4 HOH A 111 811 236 HOH HOH . G 4 HOH A 112 812 239 HOH HOH . G 4 HOH A 113 813 240 HOH HOH . G 4 HOH A 114 814 249 HOH HOH . G 4 HOH A 115 815 258 HOH HOH . G 4 HOH A 116 816 269 HOH HOH . G 4 HOH A 117 817 271 HOH HOH . G 4 HOH A 118 818 278 HOH HOH . G 4 HOH A 119 819 281 HOH HOH . G 4 HOH A 120 820 292 HOH HOH . G 4 HOH A 121 821 295 HOH HOH . G 4 HOH A 122 822 304 HOH HOH . G 4 HOH A 123 823 306 HOH HOH . G 4 HOH A 124 824 311 HOH HOH . G 4 HOH A 125 825 312 HOH HOH . G 4 HOH A 126 826 314 HOH HOH . G 4 HOH A 127 827 325 HOH HOH . G 4 HOH A 128 828 327 HOH HOH . G 4 HOH A 129 829 329 HOH HOH . G 4 HOH A 130 830 337 HOH HOH . G 4 HOH A 131 831 357 HOH HOH . G 4 HOH A 132 832 359 HOH HOH . G 4 HOH A 133 833 360 HOH HOH . G 4 HOH A 134 834 371 HOH HOH . H 4 HOH B 1 702 18 HOH HOH . H 4 HOH B 2 703 22 HOH HOH . H 4 HOH B 3 704 23 HOH HOH . H 4 HOH B 4 705 25 HOH HOH . H 4 HOH B 5 706 30 HOH HOH . H 4 HOH B 6 707 31 HOH HOH . H 4 HOH B 7 708 36 HOH HOH . H 4 HOH B 8 709 39 HOH HOH . H 4 HOH B 9 710 40 HOH HOH . H 4 HOH B 10 711 43 HOH HOH . H 4 HOH B 11 712 44 HOH HOH . H 4 HOH B 12 713 49 HOH HOH . H 4 HOH B 13 714 51 HOH HOH . H 4 HOH B 14 715 53 HOH HOH . H 4 HOH B 15 716 54 HOH HOH . H 4 HOH B 16 717 55 HOH HOH . H 4 HOH B 17 718 57 HOH HOH . H 4 HOH B 18 719 59 HOH HOH . H 4 HOH B 19 720 62 HOH HOH . H 4 HOH B 20 721 64 HOH HOH . H 4 HOH B 21 722 71 HOH HOH . H 4 HOH B 22 723 74 HOH HOH . H 4 HOH B 23 724 75 HOH HOH . H 4 HOH B 24 725 77 HOH HOH . H 4 HOH B 25 726 79 HOH HOH . H 4 HOH B 26 727 86 HOH HOH . H 4 HOH B 27 728 91 HOH HOH . H 4 HOH B 28 729 92 HOH HOH . H 4 HOH B 29 730 97 HOH HOH . H 4 HOH B 30 731 99 HOH HOH . H 4 HOH B 31 732 100 HOH HOH . H 4 HOH B 32 733 1 HOH HOH . H 4 HOH B 33 734 2 HOH HOH . H 4 HOH B 34 735 5 HOH HOH . H 4 HOH B 35 736 9 HOH HOH . H 4 HOH B 36 737 10 HOH HOH . H 4 HOH B 37 738 14 HOH HOH . H 4 HOH B 38 739 15 HOH HOH . H 4 HOH B 39 740 17 HOH HOH . H 4 HOH B 40 741 18 HOH HOH . H 4 HOH B 41 742 21 HOH HOH . H 4 HOH B 42 743 23 HOH HOH . H 4 HOH B 43 744 26 HOH HOH . H 4 HOH B 44 745 28 HOH HOH . H 4 HOH B 45 746 29 HOH HOH . H 4 HOH B 46 747 31 HOH HOH . H 4 HOH B 47 748 32 HOH HOH . H 4 HOH B 48 749 35 HOH HOH . H 4 HOH B 49 750 36 HOH HOH . H 4 HOH B 50 751 39 HOH HOH . H 4 HOH B 51 752 43 HOH HOH . H 4 HOH B 52 753 47 HOH HOH . H 4 HOH B 53 754 50 HOH HOH . H 4 HOH B 54 755 52 HOH HOH . H 4 HOH B 55 756 58 HOH HOH . H 4 HOH B 56 757 65 HOH HOH . H 4 HOH B 57 758 67 HOH HOH . H 4 HOH B 58 759 68 HOH HOH . H 4 HOH B 59 760 70 HOH HOH . H 4 HOH B 60 761 72 HOH HOH . H 4 HOH B 61 762 76 HOH HOH . H 4 HOH B 62 763 78 HOH HOH . H 4 HOH B 63 764 85 HOH HOH . H 4 HOH B 64 765 88 HOH HOH . H 4 HOH B 65 766 89 HOH HOH . H 4 HOH B 66 767 90 HOH HOH . H 4 HOH B 67 768 92 HOH HOH . H 4 HOH B 68 769 95 HOH HOH . H 4 HOH B 69 770 97 HOH HOH . H 4 HOH B 70 771 104 HOH HOH . H 4 HOH B 71 772 113 HOH HOH . H 4 HOH B 72 773 114 HOH HOH . H 4 HOH B 73 774 115 HOH HOH . H 4 HOH B 74 775 116 HOH HOH . H 4 HOH B 75 776 120 HOH HOH . H 4 HOH B 76 777 122 HOH HOH . H 4 HOH B 77 778 123 HOH HOH . H 4 HOH B 78 779 127 HOH HOH . H 4 HOH B 79 780 130 HOH HOH . H 4 HOH B 80 781 132 HOH HOH . H 4 HOH B 81 782 136 HOH HOH . H 4 HOH B 82 783 139 HOH HOH . H 4 HOH B 83 784 143 HOH HOH . H 4 HOH B 84 785 146 HOH HOH . H 4 HOH B 85 786 157 HOH HOH . H 4 HOH B 86 787 158 HOH HOH . H 4 HOH B 87 788 162 HOH HOH . H 4 HOH B 88 789 168 HOH HOH . H 4 HOH B 89 790 170 HOH HOH . H 4 HOH B 90 791 177 HOH HOH . H 4 HOH B 91 792 180 HOH HOH . H 4 HOH B 92 793 187 HOH HOH . H 4 HOH B 93 794 188 HOH HOH . H 4 HOH B 94 795 197 HOH HOH . H 4 HOH B 95 796 198 HOH HOH . H 4 HOH B 96 797 200 HOH HOH . H 4 HOH B 97 798 201 HOH HOH . H 4 HOH B 98 799 203 HOH HOH . H 4 HOH B 99 800 208 HOH HOH . H 4 HOH B 100 801 209 HOH HOH . H 4 HOH B 101 802 211 HOH HOH . H 4 HOH B 102 803 221 HOH HOH . H 4 HOH B 103 804 225 HOH HOH . H 4 HOH B 104 805 230 HOH HOH . H 4 HOH B 105 806 235 HOH HOH . H 4 HOH B 106 807 242 HOH HOH . H 4 HOH B 107 808 245 HOH HOH . H 4 HOH B 108 809 248 HOH HOH . H 4 HOH B 109 810 255 HOH HOH . H 4 HOH B 110 811 259 HOH HOH . H 4 HOH B 111 812 264 HOH HOH . H 4 HOH B 112 813 265 HOH HOH . H 4 HOH B 113 814 275 HOH HOH . H 4 HOH B 114 815 282 HOH HOH . H 4 HOH B 115 816 283 HOH HOH . H 4 HOH B 116 817 293 HOH HOH . H 4 HOH B 117 818 294 HOH HOH . H 4 HOH B 118 819 313 HOH HOH . H 4 HOH B 119 820 317 HOH HOH . H 4 HOH B 120 821 319 HOH HOH . H 4 HOH B 121 822 326 HOH HOH . H 4 HOH B 122 823 331 HOH HOH . H 4 HOH B 123 824 335 HOH HOH . H 4 HOH B 124 825 365 HOH HOH . H 4 HOH B 125 826 375 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 73.51 _atom_site.Cartn_y 19.161 _atom_site.Cartn_z 53.881 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #