data_1B70 # _model_server_result.job_id EpXb9I7TmLLkxe4ZLESTTQ _model_server_result.datetime_utc '2024-11-20 08:25:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b70 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":351}' # _entry.id 1B70 # _exptl.entry_id 1B70 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1B70 _cell.length_a 174 _cell.length_b 174 _cell.length_c 140.4 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B70 _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 262 A GLU 262 1_555 C MG MG . A MG 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.136 ? metalc ? metalc2 A OE2 GLU 262 A GLU 262 1_555 C MG MG . A MG 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc3 C MG MG . A MG 351 1_555 B OD2 ASP 452 B ASP 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc4 C MG MG . A MG 351 1_555 B OE2 GLU 461 B GLU 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc5 C MG MG . A MG 351 1_555 B OE2 GLU 462 B GLU 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.01 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1B70 _atom_sites.fract_transf_matrix[1][1] 0.005747 _atom_sites.fract_transf_matrix[1][2] 0.003318 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007122 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 351 1 MG MG . D 4 PHE A 1 352 1 PHE PHE . E 5 HOH A 1 353 2 HOH HOH . E 5 HOH A 2 354 11 HOH HOH . E 5 HOH A 3 355 12 HOH HOH . E 5 HOH A 4 356 15 HOH HOH . E 5 HOH A 5 357 16 HOH HOH . E 5 HOH A 6 358 20 HOH HOH . E 5 HOH A 7 359 25 HOH HOH . E 5 HOH A 8 360 28 HOH HOH . E 5 HOH A 9 361 32 HOH HOH . E 5 HOH A 10 362 42 HOH HOH . E 5 HOH A 11 363 48 HOH HOH . E 5 HOH A 12 364 56 HOH HOH . E 5 HOH A 13 365 69 HOH HOH . E 5 HOH A 14 366 82 HOH HOH . E 5 HOH A 15 367 86 HOH HOH . E 5 HOH A 16 368 91 HOH HOH . E 5 HOH A 17 369 93 HOH HOH . E 5 HOH A 18 370 99 HOH HOH . E 5 HOH A 19 371 102 HOH HOH . E 5 HOH A 20 372 107 HOH HOH . E 5 HOH A 21 373 109 HOH HOH . E 5 HOH A 22 374 115 HOH HOH . E 5 HOH A 23 375 121 HOH HOH . E 5 HOH A 24 376 124 HOH HOH . E 5 HOH A 25 377 125 HOH HOH . E 5 HOH A 26 378 127 HOH HOH . E 5 HOH A 27 379 128 HOH HOH . E 5 HOH A 28 380 134 HOH HOH . F 5 HOH B 1 786 1 HOH HOH . F 5 HOH B 2 787 3 HOH HOH . F 5 HOH B 3 788 4 HOH HOH . F 5 HOH B 4 789 5 HOH HOH . F 5 HOH B 5 790 6 HOH HOH . F 5 HOH B 6 791 7 HOH HOH . F 5 HOH B 7 792 8 HOH HOH . F 5 HOH B 8 793 9 HOH HOH . F 5 HOH B 9 794 10 HOH HOH . F 5 HOH B 10 795 13 HOH HOH . F 5 HOH B 11 796 14 HOH HOH . F 5 HOH B 12 797 17 HOH HOH . F 5 HOH B 13 798 18 HOH HOH . F 5 HOH B 14 799 19 HOH HOH . F 5 HOH B 15 800 21 HOH HOH . F 5 HOH B 16 801 22 HOH HOH . F 5 HOH B 17 802 23 HOH HOH . F 5 HOH B 18 803 24 HOH HOH . F 5 HOH B 19 804 26 HOH HOH . F 5 HOH B 20 805 27 HOH HOH . F 5 HOH B 21 806 29 HOH HOH . F 5 HOH B 22 807 30 HOH HOH . F 5 HOH B 23 808 31 HOH HOH . F 5 HOH B 24 809 33 HOH HOH . F 5 HOH B 25 810 34 HOH HOH . F 5 HOH B 26 811 35 HOH HOH . F 5 HOH B 27 812 36 HOH HOH . F 5 HOH B 28 813 37 HOH HOH . F 5 HOH B 29 814 38 HOH HOH . F 5 HOH B 30 815 39 HOH HOH . F 5 HOH B 31 816 40 HOH HOH . F 5 HOH B 32 817 41 HOH HOH . F 5 HOH B 33 818 43 HOH HOH . F 5 HOH B 34 819 44 HOH HOH . F 5 HOH B 35 820 45 HOH HOH . F 5 HOH B 36 821 46 HOH HOH . F 5 HOH B 37 822 47 HOH HOH . F 5 HOH B 38 823 49 HOH HOH . F 5 HOH B 39 824 50 HOH HOH . F 5 HOH B 40 825 51 HOH HOH . F 5 HOH B 41 826 52 HOH HOH . F 5 HOH B 42 827 53 HOH HOH . F 5 HOH B 43 828 54 HOH HOH . F 5 HOH B 44 829 55 HOH HOH . F 5 HOH B 45 830 57 HOH HOH . F 5 HOH B 46 831 58 HOH HOH . F 5 HOH B 47 832 59 HOH HOH . F 5 HOH B 48 833 60 HOH HOH . F 5 HOH B 49 834 61 HOH HOH . F 5 HOH B 50 835 62 HOH HOH . F 5 HOH B 51 836 63 HOH HOH . F 5 HOH B 52 837 64 HOH HOH . F 5 HOH B 53 838 65 HOH HOH . F 5 HOH B 54 839 66 HOH HOH . F 5 HOH B 55 840 67 HOH HOH . F 5 HOH B 56 841 68 HOH HOH . F 5 HOH B 57 842 70 HOH HOH . F 5 HOH B 58 843 71 HOH HOH . F 5 HOH B 59 844 72 HOH HOH . F 5 HOH B 60 845 73 HOH HOH . F 5 HOH B 61 846 74 HOH HOH . F 5 HOH B 62 847 75 HOH HOH . F 5 HOH B 63 848 76 HOH HOH . F 5 HOH B 64 849 77 HOH HOH . F 5 HOH B 65 850 78 HOH HOH . F 5 HOH B 66 851 79 HOH HOH . F 5 HOH B 67 852 80 HOH HOH . F 5 HOH B 68 853 81 HOH HOH . F 5 HOH B 69 854 83 HOH HOH . F 5 HOH B 70 855 84 HOH HOH . F 5 HOH B 71 856 85 HOH HOH . F 5 HOH B 72 857 87 HOH HOH . F 5 HOH B 73 858 88 HOH HOH . F 5 HOH B 74 859 89 HOH HOH . F 5 HOH B 75 860 90 HOH HOH . F 5 HOH B 76 861 92 HOH HOH . F 5 HOH B 77 862 94 HOH HOH . F 5 HOH B 78 863 95 HOH HOH . F 5 HOH B 79 864 96 HOH HOH . F 5 HOH B 80 865 97 HOH HOH . F 5 HOH B 81 866 98 HOH HOH . F 5 HOH B 82 867 100 HOH HOH . F 5 HOH B 83 868 101 HOH HOH . F 5 HOH B 84 869 103 HOH HOH . F 5 HOH B 85 870 104 HOH HOH . F 5 HOH B 86 871 105 HOH HOH . F 5 HOH B 87 872 106 HOH HOH . F 5 HOH B 88 873 108 HOH HOH . F 5 HOH B 89 874 110 HOH HOH . F 5 HOH B 90 875 111 HOH HOH . F 5 HOH B 91 876 112 HOH HOH . F 5 HOH B 92 877 113 HOH HOH . F 5 HOH B 93 878 114 HOH HOH . F 5 HOH B 94 879 116 HOH HOH . F 5 HOH B 95 880 117 HOH HOH . F 5 HOH B 96 881 118 HOH HOH . F 5 HOH B 97 882 119 HOH HOH . F 5 HOH B 98 883 120 HOH HOH . F 5 HOH B 99 884 123 HOH HOH . F 5 HOH B 100 885 126 HOH HOH . F 5 HOH B 101 886 129 HOH HOH . F 5 HOH B 102 887 130 HOH HOH . F 5 HOH B 103 888 131 HOH HOH . F 5 HOH B 104 889 132 HOH HOH . F 5 HOH B 105 890 133 HOH HOH . F 5 HOH B 106 891 135 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.449 _atom_site.Cartn_y 79.82 _atom_site.Cartn_z 21.69 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 351 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #