data_1B74 # _model_server_result.job_id tTnP-jIzu_3gI9wRb_OUsQ _model_server_result.datetime_utc '2025-01-18 08:10:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":538}' # _entry.id 1B74 # _exptl.entry_id 1B74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 146.144 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-GLUTAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1B74 _cell.length_a 72.17 _cell.length_b 72.17 _cell.length_c 184.99 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 36.085 62.501053 30.831667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H10 N2 O3' _chem_comp.formula_weight 146.144 _chem_comp.id DGN _chem_comp.mon_nstd_flag . _chem_comp.name D-GLUTAMINE _chem_comp.type 'd-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA DGN sing 83 n n N H DGN sing 84 n n N H2 DGN sing 85 n n CA C DGN sing 86 n n CA CB DGN sing 87 n n CA HA DGN sing 88 n n C O DGN doub 89 n n C OXT DGN sing 90 n n OXT HXT DGN sing 91 n n CB CG DGN sing 92 n n CB HB2 DGN sing 93 n n CB HB3 DGN sing 94 n n CG CD DGN sing 95 n n CG HG2 DGN sing 96 n n CG HG3 DGN sing 97 n n CD OE1 DGN doub 98 n n CD NE2 DGN sing 99 n n NE2 HE21 DGN sing 100 n n NE2 HE22 DGN sing 101 n n # _atom_sites.entry_id 1B74 _atom_sites.fract_transf_matrix[1][1] 0.013856 _atom_sites.fract_transf_matrix[1][2] 0.008 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005406 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DGN A 1 538 538 DGN DGN . C 3 HOH A 1 539 1 HOH HOH . C 3 HOH A 2 540 2 HOH HOH . C 3 HOH A 3 541 3 HOH HOH . C 3 HOH A 4 542 4 HOH HOH . C 3 HOH A 5 543 5 HOH HOH . C 3 HOH A 6 544 6 HOH HOH . C 3 HOH A 7 545 7 HOH HOH . C 3 HOH A 8 546 8 HOH HOH . C 3 HOH A 9 547 9 HOH HOH . C 3 HOH A 10 548 10 HOH HOH . C 3 HOH A 11 549 11 HOH HOH . C 3 HOH A 12 550 12 HOH HOH . C 3 HOH A 13 551 13 HOH HOH . C 3 HOH A 14 552 14 HOH HOH . C 3 HOH A 15 553 15 HOH HOH . C 3 HOH A 16 554 16 HOH HOH . C 3 HOH A 17 555 17 HOH HOH . C 3 HOH A 18 556 18 HOH HOH . C 3 HOH A 19 557 19 HOH HOH . C 3 HOH A 20 558 20 HOH HOH . C 3 HOH A 21 559 21 HOH HOH . C 3 HOH A 22 560 22 HOH HOH . C 3 HOH A 23 561 23 HOH HOH . C 3 HOH A 24 562 24 HOH HOH . C 3 HOH A 25 563 25 HOH HOH . C 3 HOH A 26 564 26 HOH HOH . C 3 HOH A 27 565 27 HOH HOH . C 3 HOH A 28 566 28 HOH HOH . C 3 HOH A 29 567 29 HOH HOH . C 3 HOH A 30 568 30 HOH HOH . C 3 HOH A 31 569 31 HOH HOH . C 3 HOH A 32 570 32 HOH HOH . C 3 HOH A 33 571 33 HOH HOH . C 3 HOH A 34 572 34 HOH HOH . C 3 HOH A 35 573 35 HOH HOH . C 3 HOH A 36 574 36 HOH HOH . C 3 HOH A 37 575 37 HOH HOH . C 3 HOH A 38 576 38 HOH HOH . C 3 HOH A 39 577 39 HOH HOH . C 3 HOH A 40 578 40 HOH HOH . C 3 HOH A 41 579 41 HOH HOH . C 3 HOH A 42 580 42 HOH HOH . C 3 HOH A 43 581 43 HOH HOH . C 3 HOH A 44 582 44 HOH HOH . C 3 HOH A 45 583 46 HOH HOH . C 3 HOH A 46 584 47 HOH HOH . C 3 HOH A 47 585 48 HOH HOH . C 3 HOH A 48 586 49 HOH HOH . C 3 HOH A 49 587 50 HOH HOH . C 3 HOH A 50 588 51 HOH HOH . C 3 HOH A 51 589 52 HOH HOH . C 3 HOH A 52 590 53 HOH HOH . C 3 HOH A 53 591 54 HOH HOH . C 3 HOH A 54 592 55 HOH HOH . C 3 HOH A 55 593 56 HOH HOH . C 3 HOH A 56 594 57 HOH HOH . C 3 HOH A 57 595 58 HOH HOH . C 3 HOH A 58 596 59 HOH HOH . C 3 HOH A 59 597 60 HOH HOH . C 3 HOH A 60 598 61 HOH HOH . C 3 HOH A 61 599 62 HOH HOH . C 3 HOH A 62 600 64 HOH HOH . C 3 HOH A 63 601 65 HOH HOH . C 3 HOH A 64 602 66 HOH HOH . C 3 HOH A 65 603 67 HOH HOH . C 3 HOH A 66 604 68 HOH HOH . C 3 HOH A 67 605 69 HOH HOH . C 3 HOH A 68 606 70 HOH HOH . C 3 HOH A 69 607 71 HOH HOH . C 3 HOH A 70 608 72 HOH HOH . C 3 HOH A 71 609 73 HOH HOH . C 3 HOH A 72 610 74 HOH HOH . C 3 HOH A 73 611 75 HOH HOH . C 3 HOH A 74 612 76 HOH HOH . C 3 HOH A 75 613 77 HOH HOH . C 3 HOH A 76 614 78 HOH HOH . C 3 HOH A 77 615 79 HOH HOH . C 3 HOH A 78 616 80 HOH HOH . C 3 HOH A 79 617 81 HOH HOH . C 3 HOH A 80 618 82 HOH HOH . C 3 HOH A 81 619 83 HOH HOH . C 3 HOH A 82 620 84 HOH HOH . C 3 HOH A 83 621 85 HOH HOH . C 3 HOH A 84 622 86 HOH HOH . C 3 HOH A 85 623 87 HOH HOH . C 3 HOH A 86 624 88 HOH HOH . C 3 HOH A 87 625 89 HOH HOH . C 3 HOH A 88 626 90 HOH HOH . C 3 HOH A 89 627 91 HOH HOH . C 3 HOH A 90 628 92 HOH HOH . C 3 HOH A 91 629 93 HOH HOH . C 3 HOH A 92 630 94 HOH HOH . C 3 HOH A 93 631 95 HOH HOH . C 3 HOH A 94 632 96 HOH HOH . C 3 HOH A 95 633 97 HOH HOH . C 3 HOH A 96 634 98 HOH HOH . C 3 HOH A 97 635 99 HOH HOH . C 3 HOH A 98 636 100 HOH HOH . C 3 HOH A 99 637 101 HOH HOH . C 3 HOH A 100 638 102 HOH HOH . C 3 HOH A 101 639 103 HOH HOH . C 3 HOH A 102 640 105 HOH HOH . C 3 HOH A 103 641 106 HOH HOH . C 3 HOH A 104 642 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N DGN . . . B 2 22.834 33.48 29.804 1 42.68 ? N DGN 538 A 1 HETATM 2 C CA DGN . . . B 2 22.324 33.59 28.511 1 46.94 ? CA DGN 538 A 1 HETATM 3 C C DGN . . . B 2 21.84 32.263 28.066 1 44.88 ? C DGN 538 A 1 HETATM 4 O O DGN . . . B 2 21.313 32.123 26.945 1 42.85 ? O DGN 538 A 1 HETATM 5 O OXT DGN . . . B 2 21.973 31.279 28.81 1 54.61 ? OXT DGN 538 A 1 HETATM 6 C CB DGN . . . B 2 21.251 34.601 28.529 1 42.42 ? CB DGN 538 A 1 HETATM 7 C CG DGN . . . B 2 21.763 35.903 29.131 1 35.27 ? CG DGN 538 A 1 HETATM 8 C CD DGN . . . B 2 20.648 36.832 29.13 1 32.97 ? CD DGN 538 A 1 HETATM 9 O OE1 DGN . . . B 2 19.488 36.396 28.937 1 26.95 ? OE1 DGN 538 A 1 HETATM 10 N NE2 DGN . . . B 2 21.012 38.127 29.358 1 37.15 ? NE2 DGN 538 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 459 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 10 #