data_1B7E # _model_server_result.job_id BVxE3acHzS_Y1ajK1pA3fA _model_server_result.datetime_utc '2024-11-21 23:19:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":480}' # _entry.id 1B7E # _exptl.entry_id 1B7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 463.799 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2,2':6',2''-TERPYRIDINE PLATINUM(II) Chloride" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1B7E _cell.length_a 181.8 _cell.length_b 71.9 _cell.length_c 41.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B7E _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 181.8 71.9 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 347 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 402 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id PT1 _struct_conn.ptnr2_label_comp_id TPT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id TPT _struct_conn.ptnr2_auth_seq_id 480 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.504 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H11 Cl N3 Pt 1' _chem_comp.formula_weight 463.799 _chem_comp.id TPT _chem_comp.mon_nstd_flag . _chem_comp.name "2,2':6',2''-TERPYRIDINE PLATINUM(II) Chloride" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PT1 N1 TPT sing 306 n n PT1 N2 TPT sing 307 n n PT1 N3 TPT sing 308 n n N1 C1 TPT sing 309 n y N1 C5 TPT doub 310 n y N2 C6 TPT doub 311 n y N2 C10 TPT sing 312 n y N3 C11 TPT sing 313 n y N3 C15 TPT doub 314 n y C1 C2 TPT doub 315 n y C1 H1 TPT sing 316 n n C2 C3 TPT sing 317 n y C2 H2 TPT sing 318 n n C3 C4 TPT doub 319 n y C3 H3 TPT sing 320 n n C4 C5 TPT sing 321 n y C4 H4 TPT sing 322 n n C5 C6 TPT sing 323 n n C6 C7 TPT sing 324 n y C7 C8 TPT doub 325 n y C7 H7 TPT sing 326 n n C8 C9 TPT sing 327 n y C8 H8 TPT sing 328 n n C9 C10 TPT doub 329 n y C9 H9 TPT sing 330 n n C10 C11 TPT sing 331 n n C11 C12 TPT doub 332 n y C12 C13 TPT sing 333 n y C12 H12 TPT sing 334 n n C13 C14 TPT doub 335 n y C13 H13 TPT sing 336 n n C14 C15 TPT sing 337 n y C14 H14 TPT sing 338 n n C15 H15 TPT sing 339 n n PT1 CL1 TPT sing 340 n n # _atom_sites.entry_id 1B7E _atom_sites.fract_transf_matrix[1][1] 0.0055 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024213 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TPT A 1 480 480 TPT TPT . C 2 TPT A 1 481 481 TPT TPT . D 3 HOH A 1 501 501 HOH HOH . D 3 HOH A 2 502 502 HOH HOH . D 3 HOH A 3 503 503 HOH HOH . D 3 HOH A 4 504 504 HOH HOH . D 3 HOH A 5 505 505 HOH HOH . D 3 HOH A 6 506 506 HOH HOH . D 3 HOH A 7 507 507 HOH HOH . D 3 HOH A 8 508 508 HOH HOH . D 3 HOH A 9 509 509 HOH HOH . D 3 HOH A 10 510 510 HOH HOH . D 3 HOH A 11 511 511 HOH HOH . D 3 HOH A 12 512 512 HOH HOH . D 3 HOH A 13 513 513 HOH HOH . D 3 HOH A 14 514 514 HOH HOH . D 3 HOH A 15 515 515 HOH HOH . D 3 HOH A 16 516 516 HOH HOH . D 3 HOH A 17 517 517 HOH HOH . D 3 HOH A 18 518 518 HOH HOH . D 3 HOH A 19 519 519 HOH HOH . D 3 HOH A 20 520 520 HOH HOH . D 3 HOH A 21 521 521 HOH HOH . D 3 HOH A 22 522 522 HOH HOH . D 3 HOH A 23 523 523 HOH HOH . D 3 HOH A 24 524 524 HOH HOH . D 3 HOH A 25 525 525 HOH HOH . D 3 HOH A 26 526 526 HOH HOH . D 3 HOH A 27 527 527 HOH HOH . D 3 HOH A 28 528 528 HOH HOH . D 3 HOH A 29 529 529 HOH HOH . D 3 HOH A 30 530 530 HOH HOH . D 3 HOH A 31 531 531 HOH HOH . D 3 HOH A 32 532 532 HOH HOH . D 3 HOH A 33 533 533 HOH HOH . D 3 HOH A 34 534 534 HOH HOH . D 3 HOH A 35 535 535 HOH HOH . D 3 HOH A 36 536 536 HOH HOH . D 3 HOH A 37 537 537 HOH HOH . D 3 HOH A 38 538 538 HOH HOH . D 3 HOH A 39 539 539 HOH HOH . D 3 HOH A 40 540 540 HOH HOH . D 3 HOH A 41 541 541 HOH HOH . D 3 HOH A 42 542 542 HOH HOH . D 3 HOH A 43 543 543 HOH HOH . D 3 HOH A 44 544 544 HOH HOH . D 3 HOH A 45 545 545 HOH HOH . D 3 HOH A 46 546 546 HOH HOH . D 3 HOH A 47 547 547 HOH HOH . D 3 HOH A 48 548 548 HOH HOH . D 3 HOH A 49 549 549 HOH HOH . D 3 HOH A 50 550 550 HOH HOH . D 3 HOH A 51 551 551 HOH HOH . D 3 HOH A 52 552 552 HOH HOH . D 3 HOH A 53 553 553 HOH HOH . D 3 HOH A 54 554 554 HOH HOH . D 3 HOH A 55 555 555 HOH HOH . D 3 HOH A 56 556 556 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 PT PT1 TPT . . . B 2 77.954 43.783 27.19 0.9 63.06 ? PT1 TPT 480 A 1 HETATM 2 N N1 TPT . . . B 2 78.596 45.649 26.606 0.9 13.24 ? N1 TPT 480 A 1 HETATM 3 N N2 TPT . . . B 2 78.869 44.331 29.089 0.9 27.53 ? N2 TPT 480 A 1 HETATM 4 N N3 TPT . . . B 2 77.426 42.244 28.444 0.9 21.02 ? N3 TPT 480 A 1 HETATM 5 C C1 TPT . . . B 2 78.516 46.105 25.353 0.9 24.43 ? C1 TPT 480 A 1 HETATM 6 C C2 TPT . . . B 2 79.155 47.284 25.061 0.9 89.68 ? C2 TPT 480 A 1 HETATM 7 C C3 TPT . . . B 2 79.93 47.925 26.024 0.9 94.93 ? C3 TPT 480 A 1 HETATM 8 C C4 TPT . . . B 2 80.086 47.379 27.281 0.9 100 ? C4 TPT 480 A 1 HETATM 9 C C5 TPT . . . B 2 79.435 46.213 27.578 0.9 7.99 ? C5 TPT 480 A 1 HETATM 10 C C6 TPT . . . B 2 79.564 45.502 28.929 0.9 29.55 ? C6 TPT 480 A 1 HETATM 11 C C7 TPT . . . B 2 80.274 45.923 30.032 0.9 100 ? C7 TPT 480 A 1 HETATM 12 C C8 TPT . . . B 2 80.25 45.167 31.21 0.9 100 ? C8 TPT 480 A 1 HETATM 13 C C9 TPT . . . B 2 79.554 43.959 31.301 0.9 45.52 ? C9 TPT 480 A 1 HETATM 14 C C10 TPT . . . B 2 78.824 43.518 30.221 0.9 45.38 ? C10 TPT 480 A 1 HETATM 15 C C11 TPT . . . B 2 77.914 42.468 29.673 0.9 50.45 ? C11 TPT 480 A 1 HETATM 16 C C12 TPT . . . B 2 77.607 41.469 30.55 0.9 16.84 ? C12 TPT 480 A 1 HETATM 17 C C13 TPT . . . B 2 76.825 40.413 30.196 0.9 19.26 ? C13 TPT 480 A 1 HETATM 18 C C14 TPT . . . B 2 76.289 40.309 28.936 0.9 100 ? C14 TPT 480 A 1 HETATM 19 C C15 TPT . . . B 2 76.635 41.239 28.023 0.9 40.27 ? C15 TPT 480 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 19 #