data_1B7R # _model_server_result.job_id SBV2iIxk_qlZsTTbOwnJpw _model_server_result.datetime_utc '2025-02-16 15:39:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1b7r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 1B7R # _exptl.entry_id 1B7R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1B7R _cell.length_a 56.58 _cell.length_b 61.01 _cell.length_c 33.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 116 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 65 A CYS 65 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 77 A CYS 77 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A O SER 61 A SER 61 1_554 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc2 A O CYS 65 A CYS 65 1_554 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc3 A O VAL 74 A VAL 74 1_554 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc4 C O HOH . A HOH 141 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc5 C O HOH . A HOH 160 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1B7R _atom_sites.fract_transf_matrix[1][1] 0.017674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016391 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 601 601 NA NA . C 3 HOH A 1 131 131 HOH HOH . C 3 HOH A 2 132 132 HOH HOH . C 3 HOH A 3 133 133 HOH HOH . C 3 HOH A 4 134 134 HOH HOH . C 3 HOH A 5 135 135 HOH HOH . C 3 HOH A 6 136 136 HOH HOH . C 3 HOH A 7 137 137 HOH HOH . C 3 HOH A 8 138 138 HOH HOH . C 3 HOH A 9 139 139 HOH HOH . C 3 HOH A 10 140 140 HOH HOH . C 3 HOH A 11 141 141 HOH HOH . C 3 HOH A 12 142 142 HOH HOH . C 3 HOH A 13 143 143 HOH HOH . C 3 HOH A 14 144 144 HOH HOH . C 3 HOH A 15 145 145 HOH HOH . C 3 HOH A 16 146 146 HOH HOH . C 3 HOH A 17 147 147 HOH HOH . C 3 HOH A 18 148 148 HOH HOH . C 3 HOH A 19 149 149 HOH HOH . C 3 HOH A 20 150 150 HOH HOH . C 3 HOH A 21 151 151 HOH HOH . C 3 HOH A 22 152 152 HOH HOH . C 3 HOH A 23 153 153 HOH HOH . C 3 HOH A 24 154 154 HOH HOH . C 3 HOH A 25 155 155 HOH HOH . C 3 HOH A 26 156 156 HOH HOH . C 3 HOH A 27 157 157 HOH HOH . C 3 HOH A 28 158 158 HOH HOH . C 3 HOH A 29 159 159 HOH HOH . C 3 HOH A 30 160 160 HOH HOH . C 3 HOH A 31 161 161 HOH HOH . C 3 HOH A 32 162 162 HOH HOH . C 3 HOH A 33 163 163 HOH HOH . C 3 HOH A 34 164 164 HOH HOH . C 3 HOH A 35 165 165 HOH HOH . C 3 HOH A 36 166 166 HOH HOH . C 3 HOH A 37 167 167 HOH HOH . C 3 HOH A 38 168 168 HOH HOH . C 3 HOH A 39 170 170 HOH HOH . C 3 HOH A 40 171 171 HOH HOH . C 3 HOH A 41 172 172 HOH HOH . C 3 HOH A 42 173 173 HOH HOH . C 3 HOH A 43 174 174 HOH HOH . C 3 HOH A 44 175 175 HOH HOH . C 3 HOH A 45 176 176 HOH HOH . C 3 HOH A 46 177 177 HOH HOH . C 3 HOH A 47 178 178 HOH HOH . C 3 HOH A 48 179 179 HOH HOH . C 3 HOH A 49 180 180 HOH HOH . C 3 HOH A 50 181 181 HOH HOH . C 3 HOH A 51 182 182 HOH HOH . C 3 HOH A 52 183 183 HOH HOH . C 3 HOH A 53 184 184 HOH HOH . C 3 HOH A 54 185 185 HOH HOH . C 3 HOH A 55 186 186 HOH HOH . C 3 HOH A 56 187 187 HOH HOH . C 3 HOH A 57 188 188 HOH HOH . C 3 HOH A 58 189 189 HOH HOH . C 3 HOH A 59 190 190 HOH HOH . C 3 HOH A 60 192 192 HOH HOH . C 3 HOH A 61 193 193 HOH HOH . C 3 HOH A 62 194 194 HOH HOH . C 3 HOH A 63 195 195 HOH HOH . C 3 HOH A 64 196 196 HOH HOH . C 3 HOH A 65 197 197 HOH HOH . C 3 HOH A 66 198 198 HOH HOH . C 3 HOH A 67 199 199 HOH HOH . C 3 HOH A 68 200 200 HOH HOH . C 3 HOH A 69 202 202 HOH HOH . C 3 HOH A 70 203 203 HOH HOH . C 3 HOH A 71 204 204 HOH HOH . C 3 HOH A 72 205 205 HOH HOH . C 3 HOH A 73 206 206 HOH HOH . C 3 HOH A 74 207 207 HOH HOH . C 3 HOH A 75 208 208 HOH HOH . C 3 HOH A 76 209 209 HOH HOH . C 3 HOH A 77 210 210 HOH HOH . C 3 HOH A 78 211 211 HOH HOH . C 3 HOH A 79 212 212 HOH HOH . C 3 HOH A 80 213 213 HOH HOH . C 3 HOH A 81 214 214 HOH HOH . C 3 HOH A 82 215 215 HOH HOH . C 3 HOH A 83 216 216 HOH HOH . C 3 HOH A 84 217 217 HOH HOH . C 3 HOH A 85 218 218 HOH HOH . C 3 HOH A 86 219 219 HOH HOH . C 3 HOH A 87 220 220 HOH HOH . C 3 HOH A 88 221 221 HOH HOH . C 3 HOH A 89 223 223 HOH HOH . C 3 HOH A 90 224 224 HOH HOH . C 3 HOH A 91 225 225 HOH HOH . C 3 HOH A 92 226 226 HOH HOH . C 3 HOH A 93 227 227 HOH HOH . C 3 HOH A 94 228 228 HOH HOH . C 3 HOH A 95 230 230 HOH HOH . C 3 HOH A 96 231 231 HOH HOH . C 3 HOH A 97 234 234 HOH HOH . C 3 HOH A 98 235 235 HOH HOH . C 3 HOH A 99 237 237 HOH HOH . C 3 HOH A 100 238 238 HOH HOH . C 3 HOH A 101 239 239 HOH HOH . C 3 HOH A 102 240 240 HOH HOH . C 3 HOH A 103 241 241 HOH HOH . C 3 HOH A 104 242 242 HOH HOH . C 3 HOH A 105 243 243 HOH HOH . C 3 HOH A 106 245 245 HOH HOH . C 3 HOH A 107 246 246 HOH HOH . C 3 HOH A 108 247 247 HOH HOH . C 3 HOH A 109 249 249 HOH HOH . C 3 HOH A 110 250 250 HOH HOH . C 3 HOH A 111 252 252 HOH HOH . C 3 HOH A 112 253 253 HOH HOH . C 3 HOH A 113 254 254 HOH HOH . C 3 HOH A 114 255 255 HOH HOH . C 3 HOH A 115 256 256 HOH HOH . C 3 HOH A 116 257 257 HOH HOH . C 3 HOH A 117 258 258 HOH HOH . C 3 HOH A 118 259 259 HOH HOH . C 3 HOH A 119 260 260 HOH HOH . C 3 HOH A 120 261 261 HOH HOH . C 3 HOH A 121 262 262 HOH HOH . C 3 HOH A 122 263 263 HOH HOH . C 3 HOH A 123 264 264 HOH HOH . C 3 HOH A 124 265 265 HOH HOH . C 3 HOH A 125 266 266 HOH HOH . C 3 HOH A 126 267 267 HOH HOH . C 3 HOH A 127 268 268 HOH HOH . C 3 HOH A 128 269 269 HOH HOH . C 3 HOH A 129 270 270 HOH HOH . C 3 HOH A 130 271 271 HOH HOH . C 3 HOH A 131 272 272 HOH HOH . C 3 HOH A 132 273 273 HOH HOH . C 3 HOH A 133 274 274 HOH HOH . C 3 HOH A 134 275 275 HOH HOH . C 3 HOH A 135 276 276 HOH HOH . C 3 HOH A 136 277 277 HOH HOH . C 3 HOH A 137 278 278 HOH HOH . C 3 HOH A 138 280 280 HOH HOH . C 3 HOH A 139 281 281 HOH HOH . C 3 HOH A 140 282 282 HOH HOH . C 3 HOH A 141 284 284 HOH HOH . C 3 HOH A 142 285 285 HOH HOH . C 3 HOH A 143 286 286 HOH HOH . C 3 HOH A 144 287 287 HOH HOH . C 3 HOH A 145 289 289 HOH HOH . C 3 HOH A 146 290 290 HOH HOH . C 3 HOH A 147 291 291 HOH HOH . C 3 HOH A 148 292 292 HOH HOH . C 3 HOH A 149 293 293 HOH HOH . C 3 HOH A 150 294 294 HOH HOH . C 3 HOH A 151 296 296 HOH HOH . C 3 HOH A 152 298 298 HOH HOH . C 3 HOH A 153 299 299 HOH HOH . C 3 HOH A 154 300 300 HOH HOH . C 3 HOH A 155 301 301 HOH HOH . C 3 HOH A 156 302 302 HOH HOH . C 3 HOH A 157 303 303 HOH HOH . C 3 HOH A 158 305 305 HOH HOH . C 3 HOH A 159 306 306 HOH HOH . C 3 HOH A 160 308 308 HOH HOH . C 3 HOH A 161 309 309 HOH HOH . C 3 HOH A 162 311 311 HOH HOH . C 3 HOH A 163 314 314 HOH HOH . C 3 HOH A 164 315 315 HOH HOH . C 3 HOH A 165 317 317 HOH HOH . C 3 HOH A 166 318 318 HOH HOH . C 3 HOH A 167 320 320 HOH HOH . C 3 HOH A 168 321 321 HOH HOH . C 3 HOH A 169 322 322 HOH HOH . C 3 HOH A 170 323 323 HOH HOH . C 3 HOH A 171 324 324 HOH HOH . C 3 HOH A 172 325 325 HOH HOH . C 3 HOH A 173 326 326 HOH HOH . C 3 HOH A 174 327 327 HOH HOH . C 3 HOH A 175 328 328 HOH HOH . C 3 HOH A 176 329 329 HOH HOH . C 3 HOH A 177 330 330 HOH HOH . C 3 HOH A 178 332 332 HOH HOH . C 3 HOH A 179 333 333 HOH HOH . C 3 HOH A 180 334 334 HOH HOH . C 3 HOH A 181 336 336 HOH HOH . C 3 HOH A 182 338 338 HOH HOH . C 3 HOH A 183 341 341 HOH HOH . C 3 HOH A 184 343 343 HOH HOH . C 3 HOH A 185 344 344 HOH HOH . C 3 HOH A 186 346 346 HOH HOH . C 3 HOH A 187 347 347 HOH HOH . C 3 HOH A 188 353 353 HOH HOH . C 3 HOH A 189 354 354 HOH HOH . C 3 HOH A 190 355 355 HOH HOH . C 3 HOH A 191 356 356 HOH HOH . C 3 HOH A 192 357 357 HOH HOH . C 3 HOH A 193 358 358 HOH HOH . C 3 HOH A 194 359 359 HOH HOH . C 3 HOH A 195 360 360 HOH HOH . C 3 HOH A 196 366 366 HOH HOH . C 3 HOH A 197 371 371 HOH HOH . C 3 HOH A 198 372 372 HOH HOH . C 3 HOH A 199 373 373 HOH HOH . C 3 HOH A 200 375 375 HOH HOH . C 3 HOH A 201 378 378 HOH HOH . C 3 HOH A 202 380 380 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.968 _atom_site.Cartn_y 7.492 _atom_site.Cartn_z 7.19 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 1036 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #