data_1B9V
#
_model_server_result.job_id            SNHWxCPw1uYo1GCWWBg6NA 
_model_server_result.datetime_utc      '2024-11-23 11:41:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1b9v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":500}' 
#
_entry.id    1B9V 
#
_exptl.entry_id    1B9V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1B9V 
_cell.length_a            124.702 
_cell.length_b            124.702 
_cell.length_c            71.573 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1B9V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        90 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 4 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 124.702 0 0 
3 'crystal symmetry operation' 3_545 -y+1/2,x-1/2,z 0 -1 0 1 0 0 0 0 1 62.351 -62.351 0 
4 'crystal symmetry operation' 4_555 y+1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 62.351 62.351 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 11 A CYS 87 1_555 A SG CYS 344 A CYS 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 46 A CYS 122 1_555 A SG CYS 51 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf3 A SG CYS 106 A CYS 182 1_555 A SG CYS 153 A CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 A SG CYS 155 A CYS 231 1_555 A SG CYS 160 A CYS 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 A SG CYS 201 A CYS 277 1_555 A SG CYS 215 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf6 A SG CYS 203 A CYS 279 1_555 A SG CYS 213 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf7 A SG CYS 242 A CYS 318 1_555 A SG CYS 261 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf8 A SG CYS 348 A CYS 424 1_555 A SG CYS 371 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 A OE1 GLU 92 A GLU 168 2_655 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc2 A OE2 GLU 92 A GLU 168 2_655 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? 
metalc ? metalc3 A O ASP 217 A ASP 293 1_555 C CA CA . A CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc4 A O THR 221 A THR 297 1_555 C CA CA . A CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc5 A OD2 ASP 248 A ASP 324 1_555 C CA CA . A CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc6 A O GLY 270 A GLY 346 1_555 C CA CA . A CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc7 C CA CA . A CA 500 1_555 F O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1B9V 
_atom_sites.fract_transf_matrix[1][1]    0.008019 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 467 467 NAG NAG . 
C 3 CA A 1 500 500 CA CA . 
D 3 CA A 1 501 501 CA CA . 
E 4 RA2 A 1 468 1 RA2 RAI . 
F 5 HOH A 1 502 502 HOH HOH . 
F 5 HOH A 2 588 588 HOH HOH . 
F 5 HOH A 3 593 593 HOH HOH . 
F 5 HOH A 4 594 594 HOH HOH . 
F 5 HOH A 5 595 595 HOH HOH . 
F 5 HOH A 6 601 601 HOH HOH . 
F 5 HOH A 7 602 602 HOH HOH . 
F 5 HOH A 8 603 603 HOH HOH . 
F 5 HOH A 9 604 604 HOH HOH . 
F 5 HOH A 10 605 605 HOH HOH . 
F 5 HOH A 11 609 609 HOH HOH . 
F 5 HOH A 12 610 610 HOH HOH . 
F 5 HOH A 13 611 611 HOH HOH . 
F 5 HOH A 14 613 613 HOH HOH . 
F 5 HOH A 15 618 618 HOH HOH . 
F 5 HOH A 16 620 620 HOH HOH . 
F 5 HOH A 17 621 621 HOH HOH . 
F 5 HOH A 18 622 622 HOH HOH . 
F 5 HOH A 19 623 623 HOH HOH . 
F 5 HOH A 20 629 629 HOH HOH . 
F 5 HOH A 21 637 637 HOH HOH . 
F 5 HOH A 22 638 638 HOH HOH . 
F 5 HOH A 23 640 640 HOH HOH . 
F 5 HOH A 24 641 641 HOH HOH . 
F 5 HOH A 25 642 642 HOH HOH . 
F 5 HOH A 26 643 643 HOH HOH . 
F 5 HOH A 27 646 646 HOH HOH . 
F 5 HOH A 28 649 649 HOH HOH . 
F 5 HOH A 29 650 650 HOH HOH . 
F 5 HOH A 30 652 652 HOH HOH . 
F 5 HOH A 31 667 667 HOH HOH . 
F 5 HOH A 32 668 668 HOH HOH . 
F 5 HOH A 33 673 673 HOH HOH . 
F 5 HOH A 34 682 682 HOH HOH . 
F 5 HOH A 35 684 684 HOH HOH . 
F 5 HOH A 36 694 694 HOH HOH . 
F 5 HOH A 37 697 697 HOH HOH . 
F 5 HOH A 38 700 700 HOH HOH . 
F 5 HOH A 39 706 706 HOH HOH . 
F 5 HOH A 40 707 707 HOH HOH . 
F 5 HOH A 41 709 709 HOH HOH . 
F 5 HOH A 42 711 711 HOH HOH . 
F 5 HOH A 43 713 713 HOH HOH . 
F 5 HOH A 44 715 715 HOH HOH . 
F 5 HOH A 45 716 716 HOH HOH . 
F 5 HOH A 46 723 723 HOH HOH . 
F 5 HOH A 47 726 726 HOH HOH . 
F 5 HOH A 48 727 727 HOH HOH . 
F 5 HOH A 49 729 729 HOH HOH . 
F 5 HOH A 50 730 730 HOH HOH . 
F 5 HOH A 51 735 735 HOH HOH . 
F 5 HOH A 52 736 736 HOH HOH . 
F 5 HOH A 53 737 737 HOH HOH . 
F 5 HOH A 54 741 741 HOH HOH . 
F 5 HOH A 55 742 742 HOH HOH . 
F 5 HOH A 56 755 755 HOH HOH . 
F 5 HOH A 57 756 756 HOH HOH . 
F 5 HOH A 58 758 758 HOH HOH . 
F 5 HOH A 59 766 766 HOH HOH . 
F 5 HOH A 60 767 767 HOH HOH . 
F 5 HOH A 61 770 770 HOH HOH . 
F 5 HOH A 62 774 774 HOH HOH . 
F 5 HOH A 63 779 779 HOH HOH . 
F 5 HOH A 64 781 781 HOH HOH . 
F 5 HOH A 65 793 793 HOH HOH . 
F 5 HOH A 66 798 798 HOH HOH . 
F 5 HOH A 67 800 800 HOH HOH . 
F 5 HOH A 68 816 816 HOH HOH . 
F 5 HOH A 69 817 817 HOH HOH . 
F 5 HOH A 70 825 825 HOH HOH . 
F 5 HOH A 71 828 828 HOH HOH . 
F 5 HOH A 72 830 830 HOH HOH . 
F 5 HOH A 73 850 850 HOH HOH . 
F 5 HOH A 74 852 852 HOH HOH . 
F 5 HOH A 75 854 854 HOH HOH . 
F 5 HOH A 76 855 855 HOH HOH . 
F 5 HOH A 77 865 865 HOH HOH . 
F 5 HOH A 78 866 866 HOH HOH . 
F 5 HOH A 79 867 867 HOH HOH . 
F 5 HOH A 80 884 884 HOH HOH . 
F 5 HOH A 81 887 887 HOH HOH . 
F 5 HOH A 82 891 891 HOH HOH . 
F 5 HOH A 83 903 903 HOH HOH . 
F 5 HOH A 84 905 905 HOH HOH . 
F 5 HOH A 85 910 910 HOH HOH . 
F 5 HOH A 86 914 914 HOH HOH . 
F 5 HOH A 87 917 917 HOH HOH . 
F 5 HOH A 88 930 930 HOH HOH . 
F 5 HOH A 89 931 931 HOH HOH . 
F 5 HOH A 90 934 934 HOH HOH . 
F 5 HOH A 91 938 938 HOH HOH . 
F 5 HOH A 92 943 943 HOH HOH . 
F 5 HOH A 93 956 956 HOH HOH . 
F 5 HOH A 94 957 957 HOH HOH . 
F 5 HOH A 95 961 961 HOH HOH . 
F 5 HOH A 96 963 963 HOH HOH . 
F 5 HOH A 97 966 966 HOH HOH . 
F 5 HOH A 98 967 967 HOH HOH . 
F 5 HOH A 99 968 968 HOH HOH . 
F 5 HOH A 100 969 969 HOH HOH . 
F 5 HOH A 101 970 970 HOH HOH . 
F 5 HOH A 102 971 971 HOH HOH . 
F 5 HOH A 103 972 972 HOH HOH . 
F 5 HOH A 104 973 973 HOH HOH . 
F 5 HOH A 105 974 974 HOH HOH . 
F 5 HOH A 106 975 975 HOH HOH . 
F 5 HOH A 107 976 976 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               25.561 
_atom_site.Cartn_y               -20.877 
_atom_site.Cartn_z               62.857 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        20.15 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           500 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#