data_1BDG # _model_server_result.job_id JZKbnxXKFDsvEVd9PC-oUA _model_server_result.datetime_utc '2024-10-24 04:27:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bdg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 1BDG # _exptl.entry_id 1BDG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1BDG _cell.length_a 114.3 _cell.length_b 114.3 _cell.length_c 155.2 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BDG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 205 A CYS 217 1_555 A SG CYS 212 A CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 261 A CYS 272 1_555 A SG CYS 261 A CYS 272 12_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 314 n n S O2 SO4 doub 315 n n S O3 SO4 sing 316 n n S O4 SO4 sing 317 n n # _atom_sites.entry_id 1BDG _atom_sites.fract_transf_matrix[1][1] 0.008749 _atom_sites.fract_transf_matrix[1][2] 0.005051 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010102 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLC A 1 501 501 GLC GLC . C 3 SO4 A 1 502 502 SO4 SO4 . D 3 SO4 A 1 503 503 SO4 SO4 . E 3 SO4 A 1 504 504 SO4 SO4 . F 4 HOH A 1 603 603 HOH HOH . F 4 HOH A 2 604 604 HOH HOH . F 4 HOH A 3 605 605 HOH HOH . F 4 HOH A 4 606 606 HOH HOH . F 4 HOH A 5 608 608 HOH HOH . F 4 HOH A 6 609 609 HOH HOH . F 4 HOH A 7 611 611 HOH HOH . F 4 HOH A 8 612 612 HOH HOH . F 4 HOH A 9 613 613 HOH HOH . F 4 HOH A 10 614 614 HOH HOH . F 4 HOH A 11 615 615 HOH HOH . F 4 HOH A 12 616 616 HOH HOH . F 4 HOH A 13 617 617 HOH HOH . F 4 HOH A 14 618 618 HOH HOH . F 4 HOH A 15 619 619 HOH HOH . F 4 HOH A 16 620 620 HOH HOH . F 4 HOH A 17 621 621 HOH HOH . F 4 HOH A 18 624 624 HOH HOH . F 4 HOH A 19 626 626 HOH HOH . F 4 HOH A 20 627 627 HOH HOH . F 4 HOH A 21 628 628 HOH HOH . F 4 HOH A 22 629 629 HOH HOH . F 4 HOH A 23 630 630 HOH HOH . F 4 HOH A 24 631 631 HOH HOH . F 4 HOH A 25 632 632 HOH HOH . F 4 HOH A 26 633 633 HOH HOH . F 4 HOH A 27 634 634 HOH HOH . F 4 HOH A 28 636 636 HOH HOH . F 4 HOH A 29 637 637 HOH HOH . F 4 HOH A 30 638 638 HOH HOH . F 4 HOH A 31 639 639 HOH HOH . F 4 HOH A 32 640 640 HOH HOH . F 4 HOH A 33 642 642 HOH HOH . F 4 HOH A 34 643 643 HOH HOH . F 4 HOH A 35 644 644 HOH HOH . F 4 HOH A 36 645 645 HOH HOH . F 4 HOH A 37 646 646 HOH HOH . F 4 HOH A 38 648 648 HOH HOH . F 4 HOH A 39 649 649 HOH HOH . F 4 HOH A 40 650 650 HOH HOH . F 4 HOH A 41 651 651 HOH HOH . F 4 HOH A 42 652 652 HOH HOH . F 4 HOH A 43 653 653 HOH HOH . F 4 HOH A 44 654 654 HOH HOH . F 4 HOH A 45 655 655 HOH HOH . F 4 HOH A 46 656 656 HOH HOH . F 4 HOH A 47 658 658 HOH HOH . F 4 HOH A 48 659 659 HOH HOH . F 4 HOH A 49 660 660 HOH HOH . F 4 HOH A 50 662 662 HOH HOH . F 4 HOH A 51 664 664 HOH HOH . F 4 HOH A 52 665 665 HOH HOH . F 4 HOH A 53 666 666 HOH HOH . F 4 HOH A 54 667 667 HOH HOH . F 4 HOH A 55 669 669 HOH HOH . F 4 HOH A 56 771 771 HOH HOH . F 4 HOH A 57 772 772 HOH HOH . F 4 HOH A 58 774 774 HOH HOH . F 4 HOH A 59 775 775 HOH HOH . F 4 HOH A 60 777 777 HOH HOH . F 4 HOH A 61 779 779 HOH HOH . F 4 HOH A 62 783 783 HOH HOH . F 4 HOH A 63 788 788 HOH HOH . F 4 HOH A 64 789 789 HOH HOH . F 4 HOH A 65 790 790 HOH HOH . F 4 HOH A 66 793 793 HOH HOH . F 4 HOH A 67 795 795 HOH HOH . F 4 HOH A 68 796 796 HOH HOH . F 4 HOH A 69 799 799 HOH HOH . F 4 HOH A 70 800 800 HOH HOH . F 4 HOH A 71 801 801 HOH HOH . F 4 HOH A 72 802 802 HOH HOH . F 4 HOH A 73 807 807 HOH HOH . F 4 HOH A 74 808 808 HOH HOH . F 4 HOH A 75 809 809 HOH HOH . F 4 HOH A 76 812 812 HOH HOH . F 4 HOH A 77 813 813 HOH HOH . F 4 HOH A 78 901 901 HOH HOH . F 4 HOH A 79 902 902 HOH HOH . F 4 HOH A 80 903 903 HOH HOH . F 4 HOH A 81 905 905 HOH HOH . F 4 HOH A 82 906 906 HOH HOH . F 4 HOH A 83 909 909 HOH HOH . F 4 HOH A 84 913 913 HOH HOH . F 4 HOH A 85 914 914 HOH HOH . F 4 HOH A 86 915 915 HOH HOH . F 4 HOH A 87 916 916 HOH HOH . F 4 HOH A 88 918 918 HOH HOH . F 4 HOH A 89 920 920 HOH HOH . F 4 HOH A 90 921 921 HOH HOH . F 4 HOH A 91 922 922 HOH HOH . F 4 HOH A 92 923 923 HOH HOH . F 4 HOH A 93 924 924 HOH HOH . F 4 HOH A 94 925 925 HOH HOH . F 4 HOH A 95 929 929 HOH HOH . F 4 HOH A 96 931 931 HOH HOH . F 4 HOH A 97 933 933 HOH HOH . F 4 HOH A 98 934 934 HOH HOH . F 4 HOH A 99 935 935 HOH HOH . F 4 HOH A 100 937 937 HOH HOH . F 4 HOH A 101 938 938 HOH HOH . F 4 HOH A 102 939 939 HOH HOH . F 4 HOH A 103 940 940 HOH HOH . F 4 HOH A 104 941 941 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 50.257 28.873 77.046 1 41.78 ? S SO4 503 A 1 HETATM 2 O O1 SO4 . . . D 3 51.698 28.742 77.027 1 40.64 ? O1 SO4 503 A 1 HETATM 3 O O2 SO4 . . . D 3 49.883 30.134 76.443 1 41.2 ? O2 SO4 503 A 1 HETATM 4 O O3 SO4 . . . D 3 49.667 27.786 76.307 1 41.72 ? O3 SO4 503 A 1 HETATM 5 O O4 SO4 . . . D 3 49.787 28.829 78.412 1 42.1 ? O4 SO4 503 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #