data_1BIB # _model_server_result.job_id p5w9aWGvACaVdiCMloeMnw _model_server_result.datetime_utc '2024-11-05 04:59:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1BIB # _exptl.entry_id 1BIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BIB _cell.length_a 114.1 _cell.length_b 114.1 _cell.length_c 60 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 70 n n C11 O12 BTN sing 71 n n C11 C10 BTN sing 72 n n O12 HO2 BTN sing 73 n n C10 C9 BTN sing 74 n n C10 H101 BTN sing 75 n n C10 H102 BTN sing 76 n n C9 C8 BTN sing 77 n n C9 H91 BTN sing 78 n n C9 H92 BTN sing 79 n n C8 C7 BTN sing 80 n n C8 H81 BTN sing 81 n n C8 H82 BTN sing 82 n n C7 C2 BTN sing 83 n n C7 H71 BTN sing 84 n n C7 H72 BTN sing 85 n n C2 S1 BTN sing 86 n n C2 C4 BTN sing 87 n n C2 H2 BTN sing 88 n n S1 C6 BTN sing 89 n n C6 C5 BTN sing 90 n n C6 H61 BTN sing 91 n n C6 H62 BTN sing 92 n n C5 N1 BTN sing 93 n n C5 C4 BTN sing 94 n n C5 H5 BTN sing 95 n n N1 C3 BTN sing 96 n n N1 HN1 BTN sing 97 n n C3 O3 BTN doub 98 n n C3 N2 BTN sing 99 n n N2 C4 BTN sing 100 n n N2 HN2 BTN sing 101 n n C4 H4 BTN sing 102 n n # _atom_sites.entry_id 1BIB _atom_sites.fract_transf_matrix[1][1] 0.008764 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016667 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BTN A 1 500 500 BTN BTN . C 3 HOH A 1 326 326 HOH HOH . C 3 HOH A 2 328 328 HOH HOH . C 3 HOH A 3 332 332 HOH HOH . C 3 HOH A 4 333 333 HOH HOH . C 3 HOH A 5 335 335 HOH HOH . C 3 HOH A 6 339 339 HOH HOH . C 3 HOH A 7 340 340 HOH HOH . C 3 HOH A 8 341 341 HOH HOH . C 3 HOH A 9 345 345 HOH HOH . C 3 HOH A 10 349 349 HOH HOH . C 3 HOH A 11 350 350 HOH HOH . C 3 HOH A 12 352 352 HOH HOH . C 3 HOH A 13 354 354 HOH HOH . C 3 HOH A 14 355 355 HOH HOH . C 3 HOH A 15 356 356 HOH HOH . C 3 HOH A 16 360 360 HOH HOH . C 3 HOH A 17 361 361 HOH HOH . C 3 HOH A 18 364 364 HOH HOH . C 3 HOH A 19 367 367 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . B 2 82.219 112.484 74.455 1 79.9 ? C11 BTN 500 A 1 HETATM 2 O O11 BTN . . . B 2 82.617 111.318 74.867 1 83.99 ? O11 BTN 500 A 1 HETATM 3 O O12 BTN . . . B 2 82.472 112.825 73.38 1 84.18 ? O12 BTN 500 A 1 HETATM 4 C C10 BTN . . . B 2 81.137 113.279 75.147 1 67.82 ? C10 BTN 500 A 1 HETATM 5 C C9 BTN . . . B 2 81.02 112.965 76.264 1 51.85 ? C9 BTN 500 A 1 HETATM 6 C C8 BTN . . . B 2 82.522 113.385 76.881 1 39.59 ? C8 BTN 500 A 1 HETATM 7 C C7 BTN . . . B 2 82.923 112.231 77.835 1 32.7 ? C7 BTN 500 A 1 HETATM 8 C C2 BTN . . . B 2 84.009 112.788 78.879 1 32.34 ? C2 BTN 500 A 1 HETATM 9 S S1 BTN . . . B 2 85.626 112.431 78.307 1 30.72 ? S1 BTN 500 A 1 HETATM 10 C C6 BTN . . . B 2 86.342 112.831 79.994 1 29.8 ? C6 BTN 500 A 1 HETATM 11 C C5 BTN . . . B 2 85.292 112.297 81.02 1 33.6 ? C5 BTN 500 A 1 HETATM 12 N N1 BTN . . . B 2 85.737 110.985 81.402 1 38.28 ? N1 BTN 500 A 1 HETATM 13 C C3 BTN . . . B 2 84.83 110.017 80.996 1 33.3 ? C3 BTN 500 A 1 HETATM 14 O O3 BTN . . . B 2 84.937 108.843 81.405 1 25.28 ? O3 BTN 500 A 1 HETATM 15 N N2 BTN . . . B 2 83.932 110.621 80.188 1 35.44 ? N2 BTN 500 A 1 HETATM 16 C C4 BTN . . . B 2 83.979 111.974 80.214 1 34.8 ? C4 BTN 500 A 1 # _model_server_stats.io_time_ms 96 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #