data_1BIR # _model_server_result.job_id lvxGzxw04uy668NOH13dwg _model_server_result.datetime_utc '2024-10-24 04:30:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":900}' # _entry.id 1BIR # _exptl.entry_id 1BIR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.26 _cell.angle_gamma 90 _cell.entry_id 1BIR _cell.length_a 49.2 _cell.length_b 48.19 _cell.length_c 40.16 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 10 A CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 A SG CYS 6 A CYS 6 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf3 B SG CYS 2 B CYS 2 1_555 B SG CYS 10 B CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf4 B SG CYS 6 B CYS 6 1_555 B SG CYS 103 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc1 A OD2 ASP 15 A ASP 15 1_555 C CA CA . A CA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc2 A OD1 ASP 15 A ASP 15 1_555 C CA CA . A CA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc3 G O HOH . A HOH 508 1_555 C CA CA . A CA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc4 G O HOH . A HOH 524 1_555 C CA CA . A CA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc5 G O HOH . A HOH 566 1_656 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc6 G O HOH . A HOH 619 1_656 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc7 G O HOH . A HOH 628 1_555 C CA CA . A CA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc8 G O HOH . A HOH 647 1_555 C CA CA . A CA 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc9 C CA CA . A CA 900 1_555 H O HOH . B HOH 559 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc10 B OD2 ASP 15 B ASP 15 1_555 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc11 B OD1 ASP 15 B ASP 15 1_555 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc12 H O HOH . B HOH 610 1_555 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc13 H O HOH . B HOH 617 1_555 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc14 H O HOH . B HOH 636 1_555 E CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BIR _atom_sites.fract_transf_matrix[1][1] 0.020325 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000092 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020751 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024901 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 900 900 CA CA . D 3 2GP A 1 106 106 2GP 2GP . E 2 CA B 1 901 901 CA CA . F 3 2GP B 1 107 107 2GP 2GP . G 4 HOH A 1 501 501 HOH HOH . G 4 HOH A 2 502 502 HOH HOH . G 4 HOH A 3 504 504 HOH HOH . G 4 HOH A 4 505 505 HOH HOH . G 4 HOH A 5 508 508 HOH HOH . G 4 HOH A 6 512 512 HOH HOH . G 4 HOH A 7 517 517 HOH HOH . G 4 HOH A 8 522 522 HOH HOH . G 4 HOH A 9 523 523 HOH HOH . G 4 HOH A 10 524 524 HOH HOH . G 4 HOH A 11 525 525 HOH HOH . G 4 HOH A 12 526 526 HOH HOH . G 4 HOH A 13 527 527 HOH HOH . G 4 HOH A 14 528 528 HOH HOH . G 4 HOH A 15 532 532 HOH HOH . G 4 HOH A 16 535 535 HOH HOH . G 4 HOH A 17 536 536 HOH HOH . G 4 HOH A 18 538 538 HOH HOH . G 4 HOH A 19 540 540 HOH HOH . G 4 HOH A 20 541 541 HOH HOH . G 4 HOH A 21 542 542 HOH HOH . G 4 HOH A 22 549 549 HOH HOH . G 4 HOH A 23 551 551 HOH HOH . G 4 HOH A 24 555 555 HOH HOH . G 4 HOH A 25 556 556 HOH HOH . G 4 HOH A 26 558 558 HOH HOH . G 4 HOH A 27 563 563 HOH HOH . G 4 HOH A 28 564 564 HOH HOH . G 4 HOH A 29 565 565 HOH HOH . G 4 HOH A 30 566 566 HOH HOH . G 4 HOH A 31 569 569 HOH HOH . G 4 HOH A 32 573 573 HOH HOH . G 4 HOH A 33 575 575 HOH HOH . G 4 HOH A 34 579 579 HOH HOH . G 4 HOH A 35 580 580 HOH HOH . G 4 HOH A 36 584 584 HOH HOH . G 4 HOH A 37 585 585 HOH HOH . G 4 HOH A 38 589 589 HOH HOH . G 4 HOH A 39 591 591 HOH HOH . G 4 HOH A 40 594 594 HOH HOH . G 4 HOH A 41 596 596 HOH HOH . G 4 HOH A 42 598 598 HOH HOH . G 4 HOH A 43 599 599 HOH HOH . G 4 HOH A 44 607 607 HOH HOH . G 4 HOH A 45 611 611 HOH HOH . G 4 HOH A 46 619 619 HOH HOH . G 4 HOH A 47 621 621 HOH HOH . G 4 HOH A 48 622 622 HOH HOH . G 4 HOH A 49 623 623 HOH HOH . G 4 HOH A 50 625 625 HOH HOH . G 4 HOH A 51 628 628 HOH HOH . G 4 HOH A 52 630 630 HOH HOH . G 4 HOH A 53 633 633 HOH HOH . G 4 HOH A 54 637 637 HOH HOH . G 4 HOH A 55 643 643 HOH HOH . G 4 HOH A 56 647 647 HOH HOH . G 4 HOH A 57 649 649 HOH HOH . G 4 HOH A 58 651 651 HOH HOH . G 4 HOH A 59 659 659 HOH HOH . H 4 HOH B 1 503 503 HOH HOH . H 4 HOH B 2 506 506 HOH HOH . H 4 HOH B 3 507 507 HOH HOH . H 4 HOH B 4 509 509 HOH HOH . H 4 HOH B 5 510 510 HOH HOH . H 4 HOH B 6 511 511 HOH HOH . H 4 HOH B 7 513 513 HOH HOH . H 4 HOH B 8 514 514 HOH HOH . H 4 HOH B 9 515 515 HOH HOH . H 4 HOH B 10 516 516 HOH HOH . H 4 HOH B 11 518 518 HOH HOH . H 4 HOH B 12 519 519 HOH HOH . H 4 HOH B 13 520 520 HOH HOH . H 4 HOH B 14 521 521 HOH HOH . H 4 HOH B 15 529 529 HOH HOH . H 4 HOH B 16 530 530 HOH HOH . H 4 HOH B 17 531 531 HOH HOH . H 4 HOH B 18 533 533 HOH HOH . H 4 HOH B 19 534 534 HOH HOH . H 4 HOH B 20 537 537 HOH HOH . H 4 HOH B 21 539 539 HOH HOH . H 4 HOH B 22 543 543 HOH HOH . H 4 HOH B 23 544 544 HOH HOH . H 4 HOH B 24 545 545 HOH HOH . H 4 HOH B 25 546 546 HOH HOH . H 4 HOH B 26 547 547 HOH HOH . H 4 HOH B 27 548 548 HOH HOH . H 4 HOH B 28 550 550 HOH HOH . H 4 HOH B 29 552 552 HOH HOH . H 4 HOH B 30 553 553 HOH HOH . H 4 HOH B 31 554 554 HOH HOH . H 4 HOH B 32 557 557 HOH HOH . H 4 HOH B 33 559 559 HOH HOH . H 4 HOH B 34 560 560 HOH HOH . H 4 HOH B 35 561 561 HOH HOH . H 4 HOH B 36 562 562 HOH HOH . H 4 HOH B 37 567 567 HOH HOH . H 4 HOH B 38 568 568 HOH HOH . H 4 HOH B 39 570 570 HOH HOH . H 4 HOH B 40 571 571 HOH HOH . H 4 HOH B 41 572 572 HOH HOH . H 4 HOH B 42 574 574 HOH HOH . H 4 HOH B 43 576 576 HOH HOH . H 4 HOH B 44 577 577 HOH HOH . H 4 HOH B 45 578 578 HOH HOH . H 4 HOH B 46 581 581 HOH HOH . H 4 HOH B 47 582 582 HOH HOH . H 4 HOH B 48 583 583 HOH HOH . H 4 HOH B 49 586 586 HOH HOH . H 4 HOH B 50 587 587 HOH HOH . H 4 HOH B 51 588 588 HOH HOH . H 4 HOH B 52 590 590 HOH HOH . H 4 HOH B 53 592 592 HOH HOH . H 4 HOH B 54 593 593 HOH HOH . H 4 HOH B 55 595 595 HOH HOH . H 4 HOH B 56 597 597 HOH HOH . H 4 HOH B 57 600 600 HOH HOH . H 4 HOH B 58 601 601 HOH HOH . H 4 HOH B 59 602 602 HOH HOH . H 4 HOH B 60 603 603 HOH HOH . H 4 HOH B 61 604 604 HOH HOH . H 4 HOH B 62 605 605 HOH HOH . H 4 HOH B 63 606 606 HOH HOH . H 4 HOH B 64 608 608 HOH HOH . H 4 HOH B 65 609 609 HOH HOH . H 4 HOH B 66 610 610 HOH HOH . H 4 HOH B 67 612 612 HOH HOH . H 4 HOH B 68 613 613 HOH HOH . H 4 HOH B 69 614 614 HOH HOH . H 4 HOH B 70 615 615 HOH HOH . H 4 HOH B 71 616 616 HOH HOH . H 4 HOH B 72 617 617 HOH HOH . H 4 HOH B 73 618 618 HOH HOH . H 4 HOH B 74 620 620 HOH HOH . H 4 HOH B 75 624 624 HOH HOH . H 4 HOH B 76 636 636 HOH HOH . H 4 HOH B 77 639 639 HOH HOH . H 4 HOH B 78 640 640 HOH HOH . H 4 HOH B 79 656 656 HOH HOH . H 4 HOH B 80 660 660 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -12.249 _atom_site.Cartn_y -3.898 _atom_site.Cartn_z 17.039 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 900 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #