data_1BIX # _model_server_result.job_id 2pyEvkgynA376IxytJ6PKQ _model_server_result.datetime_utc '2024-11-22 15:47:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bix # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 1BIX # _exptl.entry_id 1BIX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PLATINUM (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.45 _cell.angle_gamma 90 _cell.entry_id 1BIX _cell.length_a 87.26 _cell.length_b 44.701 _cell.length_c 78.778 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BIX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 15 A GLU 46 3_545 D SM SM . A SM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 A OE2 GLU 15 A GLU 46 3_545 D SM SM . A SM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? metalc ? metalc3 A OD1 ASP 39 A ASP 70 1_555 C SM SM . A SM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc4 A OE2 GLU 65 A GLU 96 1_555 C SM SM . A SM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc5 A OE1 GLU 65 A GLU 96 1_555 C SM SM . A SM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc6 A OE2 GLU 95 A GLU 126 1_565 E SM SM . A SM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc7 A OD1 ASP 117 A ASP 148 1_555 D SM SM . A SM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc8 A OE2 GLU 119 A GLU 150 1_555 D SM SM . A SM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc9 A OE1 GLU 119 A GLU 150 1_555 D SM SM . A SM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc10 A OE2 GLU 185 A GLU 216 1_555 B SM SM . A SM 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc11 A OE1 GLU 185 A GLU 216 1_555 B SM SM . A SM 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc12 A OE1 GLU 186 A GLU 217 1_555 B SM SM . A SM 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc13 A OE2 GLU 186 A GLU 217 1_555 B SM SM . A SM 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc14 A OE1 GLU 211 A GLU 242 2_656 B SM SM . A SM 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc15 A OE1 GLN 214 A GLN 245 2_656 B SM SM . A SM 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc16 A SD MET 240 A MET 271 1_555 F PT PT . A PT 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc17 A NZ LYS 245 A LYS 276 1_555 F PT PT . A PT 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc18 A O LEU 287 A LEU 318 1_555 E SM SM . A SM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc19 A OXT LEU 287 A LEU 318 1_555 E SM SM . A SM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc20 B SM SM . A SM 400 1_555 G O HOH . A HOH 566 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc21 C SM SM . A SM 401 1_555 G O HOH . A HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? # _chem_comp.formula 'Pt 2' _chem_comp.formula_weight 195.078 _chem_comp.id PT _chem_comp.mon_nstd_flag . _chem_comp.name 'PLATINUM (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BIX _atom_sites.fract_transf_matrix[1][1] 0.01146 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002741 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022371 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013052 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SM A 1 400 400 SM SM . C 2 SM A 1 401 401 SM SM . D 2 SM A 1 402 402 SM SM . E 2 SM A 1 403 403 SM SM . F 3 PT A 1 404 404 PT PT . G 4 HOH A 1 500 500 HOH HOH . G 4 HOH A 2 501 501 HOH HOH . G 4 HOH A 3 502 502 HOH HOH . G 4 HOH A 4 503 503 HOH HOH . G 4 HOH A 5 504 504 HOH HOH . G 4 HOH A 6 505 505 HOH HOH . G 4 HOH A 7 506 506 HOH HOH . G 4 HOH A 8 507 507 HOH HOH . G 4 HOH A 9 508 508 HOH HOH . G 4 HOH A 10 509 509 HOH HOH . G 4 HOH A 11 510 510 HOH HOH . G 4 HOH A 12 511 511 HOH HOH . G 4 HOH A 13 512 512 HOH HOH . G 4 HOH A 14 513 513 HOH HOH . G 4 HOH A 15 514 514 HOH HOH . G 4 HOH A 16 515 515 HOH HOH . G 4 HOH A 17 516 516 HOH HOH . G 4 HOH A 18 517 517 HOH HOH . G 4 HOH A 19 518 518 HOH HOH . G 4 HOH A 20 519 519 HOH HOH . G 4 HOH A 21 520 520 HOH HOH . G 4 HOH A 22 521 521 HOH HOH . G 4 HOH A 23 522 522 HOH HOH . G 4 HOH A 24 523 523 HOH HOH . G 4 HOH A 25 524 524 HOH HOH . G 4 HOH A 26 525 525 HOH HOH . G 4 HOH A 27 526 526 HOH HOH . G 4 HOH A 28 527 527 HOH HOH . G 4 HOH A 29 528 528 HOH HOH . G 4 HOH A 30 529 529 HOH HOH . G 4 HOH A 31 530 530 HOH HOH . G 4 HOH A 32 531 531 HOH HOH . G 4 HOH A 33 532 532 HOH HOH . G 4 HOH A 34 533 533 HOH HOH . G 4 HOH A 35 534 534 HOH HOH . G 4 HOH A 36 535 535 HOH HOH . G 4 HOH A 37 536 536 HOH HOH . G 4 HOH A 38 537 537 HOH HOH . G 4 HOH A 39 538 538 HOH HOH . G 4 HOH A 40 539 539 HOH HOH . G 4 HOH A 41 540 540 HOH HOH . G 4 HOH A 42 541 541 HOH HOH . G 4 HOH A 43 542 542 HOH HOH . G 4 HOH A 44 543 543 HOH HOH . G 4 HOH A 45 544 544 HOH HOH . G 4 HOH A 46 545 545 HOH HOH . G 4 HOH A 47 546 546 HOH HOH . G 4 HOH A 48 547 547 HOH HOH . G 4 HOH A 49 548 548 HOH HOH . G 4 HOH A 50 549 549 HOH HOH . G 4 HOH A 51 550 550 HOH HOH . G 4 HOH A 52 551 551 HOH HOH . G 4 HOH A 53 552 552 HOH HOH . G 4 HOH A 54 553 553 HOH HOH . G 4 HOH A 55 554 554 HOH HOH . G 4 HOH A 56 555 555 HOH HOH . G 4 HOH A 57 556 556 HOH HOH . G 4 HOH A 58 557 557 HOH HOH . G 4 HOH A 59 558 558 HOH HOH . G 4 HOH A 60 559 559 HOH HOH . G 4 HOH A 61 560 560 HOH HOH . G 4 HOH A 62 561 561 HOH HOH . G 4 HOH A 63 562 562 HOH HOH . G 4 HOH A 64 563 563 HOH HOH . G 4 HOH A 65 564 564 HOH HOH . G 4 HOH A 66 565 565 HOH HOH . G 4 HOH A 67 566 566 HOH HOH . G 4 HOH A 68 567 567 HOH HOH . G 4 HOH A 69 568 568 HOH HOH . G 4 HOH A 70 569 569 HOH HOH . G 4 HOH A 71 570 570 HOH HOH . G 4 HOH A 72 571 571 HOH HOH . G 4 HOH A 73 572 572 HOH HOH . G 4 HOH A 74 573 573 HOH HOH . G 4 HOH A 75 574 574 HOH HOH . G 4 HOH A 76 575 575 HOH HOH . G 4 HOH A 77 576 576 HOH HOH . G 4 HOH A 78 577 577 HOH HOH . G 4 HOH A 79 578 578 HOH HOH . G 4 HOH A 80 579 579 HOH HOH . G 4 HOH A 81 580 580 HOH HOH . G 4 HOH A 82 581 581 HOH HOH . G 4 HOH A 83 582 582 HOH HOH . G 4 HOH A 84 583 583 HOH HOH . G 4 HOH A 85 584 584 HOH HOH . G 4 HOH A 86 585 585 HOH HOH . G 4 HOH A 87 586 586 HOH HOH . G 4 HOH A 88 587 587 HOH HOH . G 4 HOH A 89 588 588 HOH HOH . G 4 HOH A 90 589 589 HOH HOH . G 4 HOH A 91 590 590 HOH HOH . G 4 HOH A 92 591 591 HOH HOH . G 4 HOH A 93 592 592 HOH HOH . G 4 HOH A 94 593 593 HOH HOH . G 4 HOH A 95 594 594 HOH HOH . G 4 HOH A 96 595 595 HOH HOH . G 4 HOH A 97 596 596 HOH HOH . G 4 HOH A 98 597 597 HOH HOH . G 4 HOH A 99 598 598 HOH HOH . G 4 HOH A 100 599 599 HOH HOH . G 4 HOH A 101 600 600 HOH HOH . G 4 HOH A 102 601 601 HOH HOH . G 4 HOH A 103 602 602 HOH HOH . G 4 HOH A 104 603 603 HOH HOH . G 4 HOH A 105 604 604 HOH HOH . G 4 HOH A 106 605 605 HOH HOH . G 4 HOH A 107 606 606 HOH HOH . G 4 HOH A 108 607 607 HOH HOH . G 4 HOH A 109 609 609 HOH HOH . G 4 HOH A 110 610 610 HOH HOH . G 4 HOH A 111 613 613 HOH HOH . G 4 HOH A 112 614 614 HOH HOH . G 4 HOH A 113 615 615 HOH HOH . G 4 HOH A 114 616 616 HOH HOH . G 4 HOH A 115 617 617 HOH HOH . G 4 HOH A 116 618 618 HOH HOH . G 4 HOH A 117 619 619 HOH HOH . G 4 HOH A 118 620 620 HOH HOH . G 4 HOH A 119 621 621 HOH HOH . G 4 HOH A 120 622 622 HOH HOH . G 4 HOH A 121 623 623 HOH HOH . G 4 HOH A 122 625 625 HOH HOH . G 4 HOH A 123 626 626 HOH HOH . G 4 HOH A 124 627 627 HOH HOH . G 4 HOH A 125 628 628 HOH HOH . G 4 HOH A 126 629 629 HOH HOH . G 4 HOH A 127 630 630 HOH HOH . G 4 HOH A 128 631 631 HOH HOH . G 4 HOH A 129 632 632 HOH HOH . G 4 HOH A 130 633 633 HOH HOH . G 4 HOH A 131 634 634 HOH HOH . G 4 HOH A 132 635 635 HOH HOH . G 4 HOH A 133 636 636 HOH HOH . G 4 HOH A 134 637 637 HOH HOH . G 4 HOH A 135 638 638 HOH HOH . G 4 HOH A 136 639 639 HOH HOH . G 4 HOH A 137 640 640 HOH HOH . G 4 HOH A 138 641 641 HOH HOH . G 4 HOH A 139 643 643 HOH HOH . G 4 HOH A 140 644 644 HOH HOH . G 4 HOH A 141 645 645 HOH HOH . G 4 HOH A 142 646 646 HOH HOH . G 4 HOH A 143 647 647 HOH HOH . G 4 HOH A 144 648 648 HOH HOH . G 4 HOH A 145 649 649 HOH HOH . G 4 HOH A 146 650 650 HOH HOH . G 4 HOH A 147 651 651 HOH HOH . G 4 HOH A 148 652 652 HOH HOH . G 4 HOH A 149 653 653 HOH HOH . G 4 HOH A 150 654 654 HOH HOH . G 4 HOH A 151 655 655 HOH HOH . G 4 HOH A 152 656 656 HOH HOH . G 4 HOH A 153 657 657 HOH HOH . G 4 HOH A 154 658 658 HOH HOH . G 4 HOH A 155 660 660 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PT _atom_site.label_atom_id PT _atom_site.label_comp_id PT _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 10.874 _atom_site.Cartn_y -10.598 _atom_site.Cartn_z 26.519 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 65.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PT _atom_site.auth_comp_id PT _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #