data_1BIY # _model_server_result.job_id 0UkBVVEKQS0Sx8jBhW2UfQ _model_server_result.datetime_utc '2024-10-18 14:34:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1biy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":692}' # _entry.id 1BIY # _exptl.entry_id 1BIY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.009 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBONATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.88 _cell.angle_gamma 90 _cell.entry_id 1BIY _cell.length_a 56.797 _cell.length_b 101.436 _cell.length_c 76.275 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BIY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 19 A CYS 19 1_555 A SG CYS 36 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? disulf ? disulf3 A SG CYS 115 A CYS 115 1_555 A SG CYS 198 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 157 A CYS 157 1_555 A SG CYS 173 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 A SG CYS 160 A CYS 160 1_555 A SG CYS 183 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 A SG CYS 170 A CYS 170 1_555 A SG CYS 181 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 A SG CYS 231 A CYS 231 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf8 A SG CYS 348 A CYS 348 1_555 A SG CYS 380 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf9 A SG CYS 358 A CYS 358 1_555 A SG CYS 371 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf10 A SG CYS 405 A CYS 405 1_555 A SG CYS 684 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf11 A SG CYS 425 A CYS 425 1_555 A SG CYS 647 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf12 A SG CYS 457 A CYS 457 1_555 A SG CYS 532 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf13 A SG CYS 481 A CYS 481 1_555 A SG CYS 675 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf14 A SG CYS 491 A CYS 491 1_555 A SG CYS 505 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf15 A SG CYS 502 A CYS 502 1_555 A SG CYS 515 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf16 A SG CYS 573 A CYS 573 1_555 A SG CYS 587 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf17 A SG CYS 625 A CYS 625 1_555 A SG CYS 630 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A OD1 ASP 60 A ASP 60 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc2 A OH TYR 92 A TYR 92 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.703 ? metalc ? metalc3 A OH TYR 192 A TYR 192 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc4 A NE2 HIS 253 A HIS 253 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc5 A OD1 ASP 395 A ASP 395 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? metalc ? metalc6 A OH TYR 433 A TYR 433 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc7 A OH TYR 526 A TYR 526 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc8 A NE2 HIS 595 A HIS 595 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc9 B FE FE . A FE 690 1_555 D O1 CO3 . A CO3 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc10 B FE FE . A FE 690 1_555 D O2 CO3 . A CO3 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc11 C FE FE . A FE 691 1_555 E C CO3 . A CO3 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc12 C FE FE . A FE 691 1_555 E O1 CO3 . A CO3 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc13 C FE FE . A FE 691 1_555 E O2 CO3 . A CO3 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? # _chem_comp.formula 'C O3 -2' _chem_comp.formula_weight 60.009 _chem_comp.id CO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 CO3 doub 70 n n C O2 CO3 sing 71 n n C O3 CO3 sing 72 n n # _atom_sites.entry_id 1BIY _atom_sites.fract_transf_matrix[1][1] 0.017607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004678 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013565 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 690 690 FE FE . C 2 FE A 1 691 691 FE FE . D 3 CO3 A 1 692 692 CO3 CO3 . E 3 CO3 A 1 693 693 CO3 CO3 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CO3 . . . D 3 12.042 -9.935 37.755 1 39.05 ? C CO3 692 A 1 HETATM 2 O O1 CO3 . . . D 3 11.486 -8.717 37.934 1 39.05 ? O1 CO3 692 A 1 HETATM 3 O O2 CO3 . . . D 3 11.186 -10.989 37.903 1 39.05 ? O2 CO3 692 A 1 HETATM 4 O O3 CO3 . . . D 3 13.278 -10.246 38.271 1 39.05 ? O3 CO3 692 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #