data_1BK9 # _model_server_result.job_id MK-H1mtDZ_s6UZ5xj0ZkQA _model_server_result.datetime_utc '2024-11-25 10:02:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bk9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 1BK9 # _exptl.entry_id 1BK9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1BK9 _cell.length_a 82.82 _cell.length_b 82.82 _cell.length_c 32.8 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 116 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 124 A CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? covale ? covale1 A ND1 HIS 47 A HIS 48 1_555 C CH PBP . A PBP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? metalc ? metalc1 A O TYR 27 A TYR 28 1_555 B CA CA . A CA 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc2 A O GLY 29 A GLY 30 1_555 B CA CA . A CA 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc3 A O GLY 31 A GLY 32 1_555 B CA CA . A CA 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc4 A OD2 ASP 48 A ASP 49 1_555 B CA CA . A CA 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc5 A OD1 ASP 48 A ASP 49 1_555 B CA CA . A CA 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.053 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BK9 _atom_sites.fract_transf_matrix[1][1] 0.012074 _atom_sites.fract_transf_matrix[1][2] 0.006971 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030488 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 200 200 CA CA . C 3 PBP A 1 400 400 PBP PBP . D 4 BU1 A 1 601 601 BU1 BU1 . E 5 HOH A 1 201 201 HOH HOH . E 5 HOH A 2 202 202 HOH HOH . E 5 HOH A 3 203 203 HOH HOH . E 5 HOH A 4 204 204 HOH HOH . E 5 HOH A 5 205 205 HOH HOH . E 5 HOH A 6 206 206 HOH HOH . E 5 HOH A 7 207 207 HOH HOH . E 5 HOH A 8 208 208 HOH HOH . E 5 HOH A 9 209 209 HOH HOH . E 5 HOH A 10 210 210 HOH HOH . E 5 HOH A 11 213 213 HOH HOH . E 5 HOH A 12 219 219 HOH HOH . E 5 HOH A 13 220 220 HOH HOH . E 5 HOH A 14 221 221 HOH HOH . E 5 HOH A 15 222 222 HOH HOH . E 5 HOH A 16 223 223 HOH HOH . E 5 HOH A 17 224 224 HOH HOH . E 5 HOH A 18 225 225 HOH HOH . E 5 HOH A 19 226 226 HOH HOH . E 5 HOH A 20 227 227 HOH HOH . E 5 HOH A 21 228 228 HOH HOH . E 5 HOH A 22 230 230 HOH HOH . E 5 HOH A 23 234 234 HOH HOH . E 5 HOH A 24 236 236 HOH HOH . E 5 HOH A 25 239 239 HOH HOH . E 5 HOH A 26 242 242 HOH HOH . E 5 HOH A 27 243 243 HOH HOH . E 5 HOH A 28 245 245 HOH HOH . E 5 HOH A 29 247 247 HOH HOH . E 5 HOH A 30 248 248 HOH HOH . E 5 HOH A 31 252 252 HOH HOH . E 5 HOH A 32 253 253 HOH HOH . E 5 HOH A 33 255 255 HOH HOH . E 5 HOH A 34 258 258 HOH HOH . E 5 HOH A 35 259 259 HOH HOH . E 5 HOH A 36 262 262 HOH HOH . E 5 HOH A 37 263 263 HOH HOH . E 5 HOH A 38 264 264 HOH HOH . E 5 HOH A 39 268 268 HOH HOH . E 5 HOH A 40 269 269 HOH HOH . E 5 HOH A 41 270 270 HOH HOH . E 5 HOH A 42 274 274 HOH HOH . E 5 HOH A 43 278 278 HOH HOH . E 5 HOH A 44 280 280 HOH HOH . E 5 HOH A 45 281 281 HOH HOH . E 5 HOH A 46 282 282 HOH HOH . E 5 HOH A 47 283 283 HOH HOH . E 5 HOH A 48 284 284 HOH HOH . E 5 HOH A 49 286 286 HOH HOH . E 5 HOH A 50 292 292 HOH HOH . E 5 HOH A 51 293 293 HOH HOH . E 5 HOH A 52 294 294 HOH HOH . E 5 HOH A 53 295 295 HOH HOH . E 5 HOH A 54 298 298 HOH HOH . E 5 HOH A 55 301 301 HOH HOH . E 5 HOH A 56 305 305 HOH HOH . E 5 HOH A 57 316 316 HOH HOH . E 5 HOH A 58 318 318 HOH HOH . E 5 HOH A 59 323 323 HOH HOH . E 5 HOH A 60 332 332 HOH HOH . E 5 HOH A 61 340 340 HOH HOH . E 5 HOH A 62 341 341 HOH HOH . E 5 HOH A 63 342 342 HOH HOH . E 5 HOH A 64 344 344 HOH HOH . E 5 HOH A 65 345 345 HOH HOH . E 5 HOH A 66 346 346 HOH HOH . E 5 HOH A 67 347 347 HOH HOH . E 5 HOH A 68 348 348 HOH HOH . E 5 HOH A 69 349 349 HOH HOH . E 5 HOH A 70 350 350 HOH HOH . E 5 HOH A 71 351 351 HOH HOH . E 5 HOH A 72 353 353 HOH HOH . E 5 HOH A 73 354 354 HOH HOH . E 5 HOH A 74 355 355 HOH HOH . E 5 HOH A 75 358 358 HOH HOH . E 5 HOH A 76 359 359 HOH HOH . E 5 HOH A 77 360 360 HOH HOH . E 5 HOH A 78 361 361 HOH HOH . E 5 HOH A 79 362 362 HOH HOH . E 5 HOH A 80 363 363 HOH HOH . E 5 HOH A 81 364 364 HOH HOH . E 5 HOH A 82 366 366 HOH HOH . E 5 HOH A 83 367 367 HOH HOH . E 5 HOH A 84 368 368 HOH HOH . E 5 HOH A 85 369 369 HOH HOH . E 5 HOH A 86 370 370 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.266 _atom_site.Cartn_y 59.497 _atom_site.Cartn_z -3.552 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 200 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #