data_1BKF # _model_server_result.job_id CYYTNLY-vS1_iaBzj25E4w _model_server_result.datetime_utc '2024-11-14 20:42:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bkf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":108}' # _entry.id 1BKF # _exptl.entry_id 1BKF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 804.018 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BKF _cell.length_a 58.36 _cell.length_b 58.36 _cell.length_c 56.04 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BKF _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 56.04 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C44 H69 N O12' _chem_comp.formula_weight 804.018 _chem_comp.id FK5 _chem_comp.mon_nstd_flag . _chem_comp.name 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms K506 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FK5 sing 83 n n C1 O1 FK5 sing 84 n n C1 O2 FK5 doub 85 n n C2 C3 FK5 sing 86 n n C2 N7 FK5 sing 87 n n C2 H2 FK5 sing 88 n n C3 C4 FK5 sing 89 n n C3 H31A FK5 sing 90 n n C3 H32A FK5 sing 91 n n C4 C5 FK5 sing 92 n n C4 H41 FK5 sing 93 n n C4 H42 FK5 sing 94 n n C5 C6 FK5 sing 95 n n C5 H51 FK5 sing 96 n n C5 H52 FK5 sing 97 n n C6 N7 FK5 sing 98 n n C6 H61 FK5 sing 99 n n C6 H62 FK5 sing 100 n n C8 C9 FK5 sing 101 n n C8 N7 FK5 sing 102 n n C8 O3 FK5 doub 103 n n C9 C10 FK5 sing 104 n n C9 O4 FK5 doub 105 n n C10 C11 FK5 sing 106 n n C10 O5 FK5 sing 107 n n C10 O6 FK5 sing 108 n n C11 C12 FK5 sing 109 n n C11 C35 FK5 sing 110 n n C11 H11 FK5 sing 111 n n C12 C13 FK5 sing 112 n n C12 H121 FK5 sing 113 n n C12 H122 FK5 sing 114 n n C13 C14 FK5 sing 115 n n C13 O7 FK5 sing 116 n n C13 H13 FK5 sing 117 n n C14 C15 FK5 sing 118 n n C14 O5 FK5 sing 119 n n C14 H14 FK5 sing 120 n n C15 C16 FK5 sing 121 n n C15 O8 FK5 sing 122 n n C15 H15 FK5 sing 123 n n C16 C17 FK5 sing 124 n n C16 H161 FK5 sing 125 n n C16 H162 FK5 sing 126 n n C17 C18 FK5 sing 127 n n C17 C36 FK5 sing 128 n n C17 H17 FK5 sing 129 n n C18 C19 FK5 sing 130 n n C18 H181 FK5 sing 131 n n C18 H182 FK5 sing 132 n n C19 C20 FK5 doub 133 e n C19 C37 FK5 sing 134 n n C20 C21 FK5 sing 135 n n C20 H20 FK5 sing 136 n n C21 C22 FK5 sing 137 n n C21 C38 FK5 sing 138 n n C21 H21 FK5 sing 139 n n C22 C23 FK5 sing 140 n n C22 O9 FK5 doub 141 n n C23 C24 FK5 sing 142 n n C23 H231 FK5 sing 143 n n C23 H232 FK5 sing 144 n n C24 C25 FK5 sing 145 n n C24 O10 FK5 sing 146 n n C24 H24 FK5 sing 147 n n C25 C26 FK5 sing 148 n n C25 C41 FK5 sing 149 n n C25 H25 FK5 sing 150 n n C26 C27 FK5 sing 151 n n C26 O1 FK5 sing 152 n n C26 H26 FK5 sing 153 n n C27 C28 FK5 doub 154 e n C27 C42 FK5 sing 155 n n C28 C29 FK5 sing 156 n n C28 H28 FK5 sing 157 n n C29 C30 FK5 sing 158 n n C29 C34 FK5 sing 159 n n C29 H29 FK5 sing 160 n n C30 C31 FK5 sing 161 n n C30 H301 FK5 sing 162 n n C30 H302 FK5 sing 163 n n C31 C32 FK5 sing 164 n n C31 O11 FK5 sing 165 n n C31 H31 FK5 sing 166 n n C32 C33 FK5 sing 167 n n C32 O12 FK5 sing 168 n n C32 H32 FK5 sing 169 n n C33 C34 FK5 sing 170 n n C33 H331 FK5 sing 171 n n C33 H332 FK5 sing 172 n n C34 H341 FK5 sing 173 n n C34 H342 FK5 sing 174 n n C35 H351 FK5 sing 175 n n C35 H352 FK5 sing 176 n n C35 H353 FK5 sing 177 n n C36 H361 FK5 sing 178 n n C36 H362 FK5 sing 179 n n C36 H363 FK5 sing 180 n n C37 H371 FK5 sing 181 n n C37 H372 FK5 sing 182 n n C37 H373 FK5 sing 183 n n C38 C39 FK5 sing 184 n n C38 H381 FK5 sing 185 n n C38 H382 FK5 sing 186 n n C39 C40 FK5 doub 187 n n C39 H39 FK5 sing 188 n n C40 H401 FK5 sing 189 n n C40 H402 FK5 sing 190 n n C41 H411 FK5 sing 191 n n C41 H412 FK5 sing 192 n n C41 H413 FK5 sing 193 n n C42 H421 FK5 sing 194 n n C42 H422 FK5 sing 195 n n C42 H423 FK5 sing 196 n n C43 O7 FK5 sing 197 n n C43 H431 FK5 sing 198 n n C43 H432 FK5 sing 199 n n C43 H433 FK5 sing 200 n n C44 O8 FK5 sing 201 n n C44 H441 FK5 sing 202 n n C44 H442 FK5 sing 203 n n C44 H443 FK5 sing 204 n n C45 O11 FK5 sing 205 n n C45 H451 FK5 sing 206 n n C45 H452 FK5 sing 207 n n C45 H453 FK5 sing 208 n n O6 HO6 FK5 sing 209 n n O10 HO10 FK5 sing 210 n n O12 HO12 FK5 sing 211 n n # _atom_sites.entry_id 1BKF _atom_sites.fract_transf_matrix[1][1] 0.017135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017135 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017844 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FK5 A 1 108 108 FK5 FK5 . C 3 HOH A 1 109 109 HOH HOH . C 3 HOH A 2 110 110 HOH HOH . C 3 HOH A 3 111 111 HOH HOH . C 3 HOH A 4 112 112 HOH HOH . C 3 HOH A 5 113 113 HOH HOH . C 3 HOH A 6 114 114 HOH HOH . C 3 HOH A 7 115 115 HOH HOH . C 3 HOH A 8 116 116 HOH HOH . C 3 HOH A 9 117 117 HOH HOH . C 3 HOH A 10 118 118 HOH HOH . C 3 HOH A 11 119 119 HOH HOH . C 3 HOH A 12 120 120 HOH HOH . C 3 HOH A 13 121 121 HOH HOH . C 3 HOH A 14 122 122 HOH HOH . C 3 HOH A 15 123 123 HOH HOH . C 3 HOH A 16 124 124 HOH HOH . C 3 HOH A 17 125 125 HOH HOH . C 3 HOH A 18 126 126 HOH HOH . C 3 HOH A 19 127 127 HOH HOH . C 3 HOH A 20 128 128 HOH HOH . C 3 HOH A 21 129 129 HOH HOH . C 3 HOH A 22 130 130 HOH HOH . C 3 HOH A 23 131 131 HOH HOH . C 3 HOH A 24 132 132 HOH HOH . C 3 HOH A 25 133 133 HOH HOH . C 3 HOH A 26 134 134 HOH HOH . C 3 HOH A 27 135 135 HOH HOH . C 3 HOH A 28 136 136 HOH HOH . C 3 HOH A 29 137 137 HOH HOH . C 3 HOH A 30 138 138 HOH HOH . C 3 HOH A 31 139 139 HOH HOH . C 3 HOH A 32 140 140 HOH HOH . C 3 HOH A 33 141 141 HOH HOH . C 3 HOH A 34 142 142 HOH HOH . C 3 HOH A 35 143 143 HOH HOH . C 3 HOH A 36 144 144 HOH HOH . C 3 HOH A 37 145 145 HOH HOH . C 3 HOH A 38 146 146 HOH HOH . C 3 HOH A 39 147 147 HOH HOH . C 3 HOH A 40 148 148 HOH HOH . C 3 HOH A 41 149 149 HOH HOH . C 3 HOH A 42 150 150 HOH HOH . C 3 HOH A 43 151 151 HOH HOH . C 3 HOH A 44 152 152 HOH HOH . C 3 HOH A 45 153 153 HOH HOH . C 3 HOH A 46 154 154 HOH HOH . C 3 HOH A 47 155 155 HOH HOH . C 3 HOH A 48 156 156 HOH HOH . C 3 HOH A 49 157 157 HOH HOH . C 3 HOH A 50 158 158 HOH HOH . C 3 HOH A 51 160 160 HOH HOH . C 3 HOH A 52 161 161 HOH HOH . C 3 HOH A 53 162 162 HOH HOH . C 3 HOH A 54 163 163 HOH HOH . C 3 HOH A 55 164 164 HOH HOH . C 3 HOH A 56 165 165 HOH HOH . C 3 HOH A 57 166 166 HOH HOH . C 3 HOH A 58 167 167 HOH HOH . C 3 HOH A 59 168 168 HOH HOH . C 3 HOH A 60 169 169 HOH HOH . C 3 HOH A 61 170 170 HOH HOH . C 3 HOH A 62 171 171 HOH HOH . C 3 HOH A 63 172 172 HOH HOH . C 3 HOH A 64 173 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FK5 . . . B 2 20.129 28.996 22.05 1 12.74 ? C1 FK5 108 A 1 HETATM 2 C C2 FK5 . . . B 2 18.679 29.468 22.442 1 9.78 ? C2 FK5 108 A 1 HETATM 3 C C3 FK5 . . . B 2 17.917 29.449 21.091 1 9.52 ? C3 FK5 108 A 1 HETATM 4 C C4 FK5 . . . B 2 18.38 30.641 20.268 1 10.1 ? C4 FK5 108 A 1 HETATM 5 C C5 FK5 . . . B 2 18.306 32.067 20.894 1 11.73 ? C5 FK5 108 A 1 HETATM 6 C C6 FK5 . . . B 2 19.076 31.952 22.182 1 11.51 ? C6 FK5 108 A 1 HETATM 7 C C8 FK5 . . . B 2 18.271 30.875 24.316 1 11.99 ? C8 FK5 108 A 1 HETATM 8 C C9 FK5 . . . B 2 17.791 32.15 24.988 1 12.62 ? C9 FK5 108 A 1 HETATM 9 C C10 FK5 . . . B 2 18.868 32.677 25.976 1 13.08 ? C10 FK5 108 A 1 HETATM 10 C C11 FK5 . . . B 2 19.318 31.559 26.896 1 14.75 ? C11 FK5 108 A 1 HETATM 11 C C12 FK5 . . . B 2 20.56 32.043 27.659 1 18.73 ? C12 FK5 108 A 1 HETATM 12 C C13 FK5 . . . B 2 21.603 32.419 26.653 1 18.48 ? C13 FK5 108 A 1 HETATM 13 C C14 FK5 . . . B 2 21.074 33.591 25.819 1 20.29 ? C14 FK5 108 A 1 HETATM 14 C C15 FK5 . . . B 2 22.111 34.147 24.863 1 27.03 ? C15 FK5 108 A 1 HETATM 15 C C16 FK5 . . . B 2 22.31 35.615 25.197 1 31.7 ? C16 FK5 108 A 1 HETATM 16 C C17 FK5 . . . B 2 23.747 35.99 25.525 1 34.42 ? C17 FK5 108 A 1 HETATM 17 C C18 FK5 . . . B 2 24.954 35.03 25.353 1 33.74 ? C18 FK5 108 A 1 HETATM 18 C C19 FK5 . . . B 2 25.709 34.527 24.094 1 33.83 ? C19 FK5 108 A 1 HETATM 19 C C20 FK5 . . . B 2 26.376 33.458 24.368 1 32.16 ? C20 FK5 108 A 1 HETATM 20 C C21 FK5 . . . B 2 27.279 32.566 23.588 1 32.51 ? C21 FK5 108 A 1 HETATM 21 C C22 FK5 . . . B 2 26.577 31.204 23.493 1 30.55 ? C22 FK5 108 A 1 HETATM 22 C C23 FK5 . . . B 2 25.69 31.165 22.255 1 24.55 ? C23 FK5 108 A 1 HETATM 23 C C24 FK5 . . . B 2 24.75 29.927 22.188 1 19.48 ? C24 FK5 108 A 1 HETATM 24 C C25 FK5 . . . B 2 23.327 30.319 22.369 1 15.15 ? C25 FK5 108 A 1 HETATM 25 C C26 FK5 . . . B 2 22.44 29.148 22.59 1 14.29 ? C26 FK5 108 A 1 HETATM 26 C C27 FK5 . . . B 2 22.931 28.254 23.649 1 15.49 ? C27 FK5 108 A 1 HETATM 27 C C28 FK5 . . . B 2 23.154 26.985 23.257 1 14.12 ? C28 FK5 108 A 1 HETATM 28 C C29 FK5 . . . B 2 23.692 25.889 24.048 1 15.89 ? C29 FK5 108 A 1 HETATM 29 C C30 FK5 . . . B 2 22.724 24.708 24.156 1 15.13 ? C30 FK5 108 A 1 HETATM 30 C C31 FK5 . . . B 2 23.467 23.511 24.843 1 19.82 ? C31 FK5 108 A 1 HETATM 31 C C32 FK5 . . . B 2 24.75 23.147 24.151 1 19.49 ? C32 FK5 108 A 1 HETATM 32 C C33 FK5 . . . B 2 25.683 24.282 24.023 1 20.03 ? C33 FK5 108 A 1 HETATM 33 C C34 FK5 . . . B 2 25.043 25.561 23.426 1 17.24 ? C34 FK5 108 A 1 HETATM 34 C C35 FK5 . . . B 2 18.219 31.071 27.853 1 16.18 ? C35 FK5 108 A 1 HETATM 35 C C36 FK5 . . . B 2 23.608 36.29 26.997 1 37.64 ? C36 FK5 108 A 1 HETATM 36 C C37 FK5 . . . B 2 25.741 35.127 22.724 1 30.83 ? C37 FK5 108 A 1 HETATM 37 C C38 FK5 . . . B 2 28.653 32.491 24.431 1 37.86 ? C38 FK5 108 A 1 HETATM 38 C C39 FK5 . . . B 2 28.79 32.982 25.762 1 41.04 ? C39 FK5 108 A 1 HETATM 39 C C40 FK5 . . . B 2 29.355 33.81 26.237 1 41.82 ? C40 FK5 108 A 1 HETATM 40 C C41 FK5 . . . B 2 22.907 31.246 21.17 1 14.43 ? C41 FK5 108 A 1 HETATM 41 C C42 FK5 . . . B 2 22.717 28.773 25.09 1 12.24 ? C42 FK5 108 A 1 HETATM 42 C C43 FK5 . . . B 2 23.769 31.74 27.275 1 22.82 ? C43 FK5 108 A 1 HETATM 43 C C44 FK5 . . . B 2 21.782 35.094 22.413 1 25.6 ? C44 FK5 108 A 1 HETATM 44 C C45 FK5 . . . B 2 21.982 22.18 26.071 1 18.87 ? C45 FK5 108 A 1 HETATM 45 N N7 FK5 . . . B 2 18.8 30.801 23.12 1 12.11 ? N7 FK5 108 A 1 HETATM 46 O O1 FK5 . . . B 2 21.042 29.716 22.602 1 13 ? O1 FK5 108 A 1 HETATM 47 O O2 FK5 . . . B 2 20.322 28 21.519 1 12.85 ? O2 FK5 108 A 1 HETATM 48 O O3 FK5 . . . B 2 17.855 29.812 24.904 1 12.68 ? O3 FK5 108 A 1 HETATM 49 O O4 FK5 . . . B 2 16.844 32.886 24.764 1 13.35 ? O4 FK5 108 A 1 HETATM 50 O O5 FK5 . . . B 2 19.883 33.15 25.084 1 14.42 ? O5 FK5 108 A 1 HETATM 51 O O6 FK5 . . . B 2 18.321 33.828 26.547 1 13.21 ? O6 FK5 108 A 1 HETATM 52 O O7 FK5 . . . B 2 22.848 32.836 27.263 1 20.67 ? O7 FK5 108 A 1 HETATM 53 O O8 FK5 . . . B 2 21.824 34.055 23.408 1 29.57 ? O8 FK5 108 A 1 HETATM 54 O O9 FK5 . . . B 2 26.358 30.409 24.389 1 30.85 ? O9 FK5 108 A 1 HETATM 55 O O10 FK5 . . . B 2 25.115 29.299 20.902 1 19.35 ? O10 FK5 108 A 1 HETATM 56 O O11 FK5 . . . B 2 22.53 22.458 24.898 1 21.39 ? O11 FK5 108 A 1 HETATM 57 O O12 FK5 . . . B 2 25.413 22.071 24.95 1 21.93 ? O12 FK5 108 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 57 #