data_1BL3 # _model_server_result.job_id 57SQViw0n0Deicfaou1quQ _model_server_result.datetime_utc '2024-11-23 11:43:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bl3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 1BL3 # _exptl.entry_id 1BL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108 _cell.angle_gamma 90 _cell.entry_id 1BL3 _cell.length_a 99.1 _cell.length_b 72.5 _cell.length_c 79.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 -x+1/2,y+1/2,-z -1 0 0 0 1 0 0 0 -1 49.55 36.25 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 15 A ASP 64 1_555 D MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 A OD2 ASP 67 A ASP 116 1_555 D MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 D MG MG . A MG 501 1_555 G O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc4 D MG MG . A MG 501 1_555 G O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc5 D MG MG . A MG 501 1_555 G O HOH . A HOH 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc6 D MG MG . A MG 501 1_555 G O HOH . A HOH 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc7 B OD1 ASP 15 B ASP 64 1_555 E MG MG . B MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc8 B OD2 ASP 67 B ASP 116 1_555 E MG MG . B MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.905 ? metalc ? metalc9 E MG MG . B MG 503 1_555 H O HOH . B HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? metalc ? metalc10 E MG MG . B MG 503 1_555 H O HOH . B HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc11 C OD1 ASP 15 C ASP 64 1_555 F MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc12 C OD2 ASP 67 C ASP 116 1_555 F MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc13 F MG MG . C MG 502 1_555 I O HOH . C HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc14 F MG MG . C MG 502 1_555 I O HOH . C HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc15 F MG MG . C MG 502 1_555 I O HOH . C HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc16 F MG MG . C MG 502 1_555 I O HOH . C HOH 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BL3 _atom_sites.fract_transf_matrix[1][1] 0.010091 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003279 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MG A 1 501 501 MG MG . E 2 MG B 1 503 503 MG MG . F 2 MG C 1 502 502 MG MG . G 3 HOH A 1 502 4 HOH HOH . G 3 HOH A 2 503 5 HOH HOH . G 3 HOH A 3 504 6 HOH HOH . G 3 HOH A 4 505 8 HOH HOH . G 3 HOH A 5 506 13 HOH HOH . G 3 HOH A 6 507 18 HOH HOH . G 3 HOH A 7 508 19 HOH HOH . G 3 HOH A 8 509 21 HOH HOH . G 3 HOH A 9 510 23 HOH HOH . G 3 HOH A 10 511 24 HOH HOH . G 3 HOH A 11 512 25 HOH HOH . G 3 HOH A 12 513 26 HOH HOH . G 3 HOH A 13 514 28 HOH HOH . G 3 HOH A 14 515 29 HOH HOH . G 3 HOH A 15 516 31 HOH HOH . G 3 HOH A 16 517 32 HOH HOH . G 3 HOH A 17 518 39 HOH HOH . G 3 HOH A 18 519 40 HOH HOH . G 3 HOH A 19 520 41 HOH HOH . G 3 HOH A 20 521 43 HOH HOH . G 3 HOH A 21 522 44 HOH HOH . G 3 HOH A 22 523 48 HOH HOH . G 3 HOH A 23 524 49 HOH HOH . G 3 HOH A 24 525 57 HOH HOH . G 3 HOH A 25 526 58 HOH HOH . G 3 HOH A 26 527 59 HOH HOH . G 3 HOH A 27 528 60 HOH HOH . G 3 HOH A 28 529 66 HOH HOH . G 3 HOH A 29 530 68 HOH HOH . G 3 HOH A 30 531 69 HOH HOH . G 3 HOH A 31 532 70 HOH HOH . G 3 HOH A 32 533 71 HOH HOH . G 3 HOH A 33 534 74 HOH HOH . G 3 HOH A 34 535 75 HOH HOH . G 3 HOH A 35 536 79 HOH HOH . G 3 HOH A 36 537 80 HOH HOH . G 3 HOH A 37 538 85 HOH HOH . G 3 HOH A 38 539 89 HOH HOH . G 3 HOH A 39 540 91 HOH HOH . G 3 HOH A 40 541 101 HOH HOH . G 3 HOH A 41 542 104 HOH HOH . G 3 HOH A 42 543 111 HOH HOH . G 3 HOH A 43 544 112 HOH HOH . G 3 HOH A 44 545 116 HOH HOH . G 3 HOH A 45 546 123 HOH HOH . G 3 HOH A 46 547 124 HOH HOH . G 3 HOH A 47 548 130 HOH HOH . G 3 HOH A 48 549 133 HOH HOH . G 3 HOH A 49 550 138 HOH HOH . G 3 HOH A 50 551 140 HOH HOH . G 3 HOH A 51 552 141 HOH HOH . G 3 HOH A 52 553 144 HOH HOH . G 3 HOH A 53 554 146 HOH HOH . G 3 HOH A 54 555 151 HOH HOH . G 3 HOH A 55 556 159 HOH HOH . G 3 HOH A 56 557 160 HOH HOH . G 3 HOH A 57 558 163 HOH HOH . G 3 HOH A 58 559 164 HOH HOH . H 3 HOH B 1 504 7 HOH HOH . H 3 HOH B 2 505 15 HOH HOH . H 3 HOH B 3 506 17 HOH HOH . H 3 HOH B 4 507 20 HOH HOH . H 3 HOH B 5 508 36 HOH HOH . H 3 HOH B 6 509 42 HOH HOH . H 3 HOH B 7 510 46 HOH HOH . H 3 HOH B 8 511 51 HOH HOH . H 3 HOH B 9 512 54 HOH HOH . H 3 HOH B 10 513 56 HOH HOH . H 3 HOH B 11 514 62 HOH HOH . H 3 HOH B 12 515 76 HOH HOH . H 3 HOH B 13 516 82 HOH HOH . H 3 HOH B 14 517 83 HOH HOH . H 3 HOH B 15 518 88 HOH HOH . H 3 HOH B 16 519 95 HOH HOH . H 3 HOH B 17 520 106 HOH HOH . H 3 HOH B 18 521 107 HOH HOH . H 3 HOH B 19 522 108 HOH HOH . H 3 HOH B 20 523 110 HOH HOH . H 3 HOH B 21 524 113 HOH HOH . H 3 HOH B 22 525 114 HOH HOH . H 3 HOH B 23 526 115 HOH HOH . H 3 HOH B 24 527 117 HOH HOH . H 3 HOH B 25 528 119 HOH HOH . H 3 HOH B 26 529 125 HOH HOH . H 3 HOH B 27 530 126 HOH HOH . H 3 HOH B 28 531 127 HOH HOH . H 3 HOH B 29 532 132 HOH HOH . H 3 HOH B 30 533 135 HOH HOH . H 3 HOH B 31 534 142 HOH HOH . H 3 HOH B 32 535 148 HOH HOH . H 3 HOH B 33 536 150 HOH HOH . H 3 HOH B 34 537 153 HOH HOH . H 3 HOH B 35 538 161 HOH HOH . I 3 HOH C 1 503 1 HOH HOH . I 3 HOH C 2 504 2 HOH HOH . I 3 HOH C 3 505 3 HOH HOH . I 3 HOH C 4 506 9 HOH HOH . I 3 HOH C 5 507 10 HOH HOH . I 3 HOH C 6 508 11 HOH HOH . I 3 HOH C 7 509 14 HOH HOH . I 3 HOH C 8 510 16 HOH HOH . I 3 HOH C 9 511 22 HOH HOH . I 3 HOH C 10 512 27 HOH HOH . I 3 HOH C 11 513 30 HOH HOH . I 3 HOH C 12 514 33 HOH HOH . I 3 HOH C 13 515 34 HOH HOH . I 3 HOH C 14 516 35 HOH HOH . I 3 HOH C 15 517 37 HOH HOH . I 3 HOH C 16 518 38 HOH HOH . I 3 HOH C 17 519 45 HOH HOH . I 3 HOH C 18 520 50 HOH HOH . I 3 HOH C 19 521 53 HOH HOH . I 3 HOH C 20 522 55 HOH HOH . I 3 HOH C 21 523 61 HOH HOH . I 3 HOH C 22 524 63 HOH HOH . I 3 HOH C 23 525 64 HOH HOH . I 3 HOH C 24 526 65 HOH HOH . I 3 HOH C 25 527 67 HOH HOH . I 3 HOH C 26 528 73 HOH HOH . I 3 HOH C 27 529 77 HOH HOH . I 3 HOH C 28 530 78 HOH HOH . I 3 HOH C 29 531 81 HOH HOH . I 3 HOH C 30 532 84 HOH HOH . I 3 HOH C 31 533 86 HOH HOH . I 3 HOH C 32 534 87 HOH HOH . I 3 HOH C 33 535 90 HOH HOH . I 3 HOH C 34 536 92 HOH HOH . I 3 HOH C 35 537 94 HOH HOH . I 3 HOH C 36 538 96 HOH HOH . I 3 HOH C 37 539 97 HOH HOH . I 3 HOH C 38 540 98 HOH HOH . I 3 HOH C 39 541 99 HOH HOH . I 3 HOH C 40 542 100 HOH HOH . I 3 HOH C 41 543 102 HOH HOH . I 3 HOH C 42 544 103 HOH HOH . I 3 HOH C 43 545 109 HOH HOH . I 3 HOH C 44 546 118 HOH HOH . I 3 HOH C 45 547 120 HOH HOH . I 3 HOH C 46 548 121 HOH HOH . I 3 HOH C 47 549 122 HOH HOH . I 3 HOH C 48 550 128 HOH HOH . I 3 HOH C 49 551 136 HOH HOH . I 3 HOH C 50 552 137 HOH HOH . I 3 HOH C 51 553 139 HOH HOH . I 3 HOH C 52 554 147 HOH HOH . I 3 HOH C 53 555 149 HOH HOH . I 3 HOH C 54 556 154 HOH HOH . I 3 HOH C 55 557 156 HOH HOH . I 3 HOH C 56 558 157 HOH HOH . I 3 HOH C 57 559 162 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.953 _atom_site.Cartn_y 4.163 _atom_site.Cartn_z -20.058 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #