data_1BL5 # _model_server_result.job_id JWg3RU_1gJObU-upPcF-Zw _model_server_result.datetime_utc '2024-11-05 00:35:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bl5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":418}' # _entry.id 1BL5 # _exptl.entry_id 1BL5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BL5 _cell.length_a 106.1 _cell.length_b 106.1 _cell.length_c 151.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BL5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O2 AKG . A AKG 1 1_555 B MG MG . A MG 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc2 C O5 AKG . A AKG 1 1_555 B MG MG . A MG 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc3 A OD2 ASP 281 A ASP 283 7_555 B MG MG . A MG 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc4 A OD1 ASP 305 A ASP 307 1_555 B MG MG . A MG 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BL5 _atom_sites.fract_transf_matrix[1][1] 0.009425 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006588 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 418 418 MG MG . C 3 AKG A 1 1 1 AKG AKG . D 4 NAP A 1 2 2 NAP NAP . E 5 HOH A 1 420 420 HOH HOH . E 5 HOH A 2 421 421 HOH HOH . E 5 HOH A 3 425 425 HOH HOH . E 5 HOH A 4 426 426 HOH HOH . E 5 HOH A 5 427 427 HOH HOH . E 5 HOH A 6 428 428 HOH HOH . E 5 HOH A 7 429 429 HOH HOH . E 5 HOH A 8 430 430 HOH HOH . E 5 HOH A 9 431 431 HOH HOH . E 5 HOH A 10 432 432 HOH HOH . E 5 HOH A 11 434 434 HOH HOH . E 5 HOH A 12 436 436 HOH HOH . E 5 HOH A 13 437 437 HOH HOH . E 5 HOH A 14 438 438 HOH HOH . E 5 HOH A 15 440 440 HOH HOH . E 5 HOH A 16 442 442 HOH HOH . E 5 HOH A 17 443 443 HOH HOH . E 5 HOH A 18 444 444 HOH HOH . E 5 HOH A 19 445 445 HOH HOH . E 5 HOH A 20 446 446 HOH HOH . E 5 HOH A 21 447 447 HOH HOH . E 5 HOH A 22 448 448 HOH HOH . E 5 HOH A 23 449 449 HOH HOH . E 5 HOH A 24 450 450 HOH HOH . E 5 HOH A 25 451 451 HOH HOH . E 5 HOH A 26 452 452 HOH HOH . E 5 HOH A 27 457 457 HOH HOH . E 5 HOH A 28 459 459 HOH HOH . E 5 HOH A 29 460 460 HOH HOH . E 5 HOH A 30 463 463 HOH HOH . E 5 HOH A 31 464 464 HOH HOH . E 5 HOH A 32 465 465 HOH HOH . E 5 HOH A 33 466 466 HOH HOH . E 5 HOH A 34 467 467 HOH HOH . E 5 HOH A 35 468 468 HOH HOH . E 5 HOH A 36 469 469 HOH HOH . E 5 HOH A 37 470 470 HOH HOH . E 5 HOH A 38 471 471 HOH HOH . E 5 HOH A 39 472 472 HOH HOH . E 5 HOH A 40 474 474 HOH HOH . E 5 HOH A 41 477 477 HOH HOH . E 5 HOH A 42 479 479 HOH HOH . E 5 HOH A 43 480 480 HOH HOH . E 5 HOH A 44 481 481 HOH HOH . E 5 HOH A 45 482 482 HOH HOH . E 5 HOH A 46 483 483 HOH HOH . E 5 HOH A 47 484 484 HOH HOH . E 5 HOH A 48 485 485 HOH HOH . E 5 HOH A 49 487 487 HOH HOH . E 5 HOH A 50 488 488 HOH HOH . E 5 HOH A 51 490 490 HOH HOH . E 5 HOH A 52 491 491 HOH HOH . E 5 HOH A 53 493 493 HOH HOH . E 5 HOH A 54 495 495 HOH HOH . E 5 HOH A 55 497 497 HOH HOH . E 5 HOH A 56 498 498 HOH HOH . E 5 HOH A 57 499 499 HOH HOH . E 5 HOH A 58 500 500 HOH HOH . E 5 HOH A 59 501 501 HOH HOH . E 5 HOH A 60 506 506 HOH HOH . E 5 HOH A 61 507 507 HOH HOH . E 5 HOH A 62 510 510 HOH HOH . E 5 HOH A 63 517 517 HOH HOH . E 5 HOH A 64 526 526 HOH HOH . E 5 HOH A 65 528 528 HOH HOH . E 5 HOH A 66 530 530 HOH HOH . E 5 HOH A 67 531 531 HOH HOH . E 5 HOH A 68 532 532 HOH HOH . E 5 HOH A 69 533 533 HOH HOH . E 5 HOH A 70 534 534 HOH HOH . E 5 HOH A 71 535 535 HOH HOH . E 5 HOH A 72 537 537 HOH HOH . E 5 HOH A 73 538 538 HOH HOH . E 5 HOH A 74 539 539 HOH HOH . E 5 HOH A 75 540 540 HOH HOH . E 5 HOH A 76 541 541 HOH HOH . E 5 HOH A 77 543 543 HOH HOH . E 5 HOH A 78 544 544 HOH HOH . E 5 HOH A 79 545 545 HOH HOH . E 5 HOH A 80 546 546 HOH HOH . E 5 HOH A 81 547 547 HOH HOH . E 5 HOH A 82 548 548 HOH HOH . E 5 HOH A 83 549 549 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 84.735 _atom_site.Cartn_y 69.874 _atom_site.Cartn_z 2.101 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 418 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #