data_1BLL # _model_server_result.job_id FjDmJ0M66-0gUU9QxA_1-A _model_server_result.datetime_utc '2024-11-24 14:42:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bll # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":488}' # _entry.id 1BLL # _exptl.entry_id 1BLL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1BLL _cell.length_a 130.3 _cell.length_b 130.3 _cell.length_c 121.9 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BLL _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 130.3 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 65.15 112.84311 0 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 65.15 112.84311 60.95 5 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 130.3 0 60.95 6 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 60.95 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C L2O 1 I L2O 2 1_555 B N VAL 2 I VAL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? metalc ? metalc1 A NZ LYS 251 E LYS 250 1_555 D ZN ZN . E ZN 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A OD2 ASP 256 E ASP 255 1_555 C ZN ZN . E ZN 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc3 A OD2 ASP 256 E ASP 255 1_555 D ZN ZN . E ZN 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc4 A OD2 ASP 274 E ASP 273 1_555 D ZN ZN . E ZN 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc5 A OD1 ASP 333 E ASP 332 1_555 C ZN ZN . E ZN 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc6 A O ASP 333 E ASP 332 1_555 C ZN ZN . E ZN 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc7 A OE1 GLU 335 E GLU 334 1_555 C ZN ZN . E ZN 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc8 A OE2 GLU 335 E GLU 334 1_555 D ZN ZN . E ZN 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc9 C ZN ZN . E ZN 488 1_555 B O1 L2O 1 I L2O 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc10 D ZN ZN . E ZN 489 1_555 B N L2O 1 I L2O 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc11 D ZN ZN . E ZN 489 1_555 B O1 L2O 1 I L2O 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BLL _atom_sites.fract_transf_matrix[1][1] 0.007675 _atom_sites.fract_transf_matrix[1][2] 0.004431 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008862 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN E 1 488 488 ZN ZN . D 3 ZN E 1 489 489 ZN ZN . E 4 HOH E 1 491 491 HOH HOH . E 4 HOH E 2 495 495 HOH HOH . E 4 HOH E 3 496 496 HOH HOH . E 4 HOH E 4 497 497 HOH HOH . E 4 HOH E 5 498 498 HOH HOH . E 4 HOH E 6 499 499 HOH HOH . E 4 HOH E 7 500 500 HOH HOH . E 4 HOH E 8 501 501 HOH HOH . E 4 HOH E 9 502 502 HOH HOH . E 4 HOH E 10 503 503 HOH HOH . E 4 HOH E 11 504 504 HOH HOH . E 4 HOH E 12 505 505 HOH HOH . E 4 HOH E 13 506 506 HOH HOH . E 4 HOH E 14 507 507 HOH HOH . E 4 HOH E 15 508 508 HOH HOH . E 4 HOH E 16 509 509 HOH HOH . E 4 HOH E 17 510 510 HOH HOH . E 4 HOH E 18 511 511 HOH HOH . E 4 HOH E 19 512 512 HOH HOH . E 4 HOH E 20 513 513 HOH HOH . E 4 HOH E 21 514 514 HOH HOH . E 4 HOH E 22 515 515 HOH HOH . E 4 HOH E 23 516 516 HOH HOH . E 4 HOH E 24 517 517 HOH HOH . E 4 HOH E 25 518 518 HOH HOH . E 4 HOH E 26 520 520 HOH HOH . E 4 HOH E 27 521 521 HOH HOH . E 4 HOH E 28 522 522 HOH HOH . E 4 HOH E 29 523 523 HOH HOH . E 4 HOH E 30 524 524 HOH HOH . E 4 HOH E 31 525 525 HOH HOH . E 4 HOH E 32 526 526 HOH HOH . E 4 HOH E 33 527 527 HOH HOH . E 4 HOH E 34 528 528 HOH HOH . E 4 HOH E 35 529 529 HOH HOH . E 4 HOH E 36 530 530 HOH HOH . E 4 HOH E 37 531 531 HOH HOH . E 4 HOH E 38 532 532 HOH HOH . E 4 HOH E 39 533 533 HOH HOH . E 4 HOH E 40 534 534 HOH HOH . E 4 HOH E 41 535 535 HOH HOH . E 4 HOH E 42 536 536 HOH HOH . E 4 HOH E 43 537 537 HOH HOH . E 4 HOH E 44 538 538 HOH HOH . E 4 HOH E 45 539 539 HOH HOH . E 4 HOH E 46 540 540 HOH HOH . E 4 HOH E 47 541 541 HOH HOH . E 4 HOH E 48 542 542 HOH HOH . E 4 HOH E 49 543 543 HOH HOH . E 4 HOH E 50 544 544 HOH HOH . E 4 HOH E 51 545 545 HOH HOH . E 4 HOH E 52 546 546 HOH HOH . E 4 HOH E 53 547 547 HOH HOH . E 4 HOH E 54 548 548 HOH HOH . E 4 HOH E 55 549 549 HOH HOH . E 4 HOH E 56 550 550 HOH HOH . E 4 HOH E 57 551 551 HOH HOH . E 4 HOH E 58 552 552 HOH HOH . E 4 HOH E 59 553 553 HOH HOH . E 4 HOH E 60 554 554 HOH HOH . E 4 HOH E 61 555 555 HOH HOH . E 4 HOH E 62 556 556 HOH HOH . E 4 HOH E 63 557 557 HOH HOH . E 4 HOH E 64 558 558 HOH HOH . E 4 HOH E 65 559 559 HOH HOH . E 4 HOH E 66 560 560 HOH HOH . E 4 HOH E 67 561 561 HOH HOH . E 4 HOH E 68 562 562 HOH HOH . E 4 HOH E 69 563 563 HOH HOH . E 4 HOH E 70 564 564 HOH HOH . E 4 HOH E 71 565 565 HOH HOH . E 4 HOH E 72 566 566 HOH HOH . E 4 HOH E 73 568 568 HOH HOH . E 4 HOH E 74 569 569 HOH HOH . E 4 HOH E 75 571 571 HOH HOH . E 4 HOH E 76 572 572 HOH HOH . E 4 HOH E 77 573 573 HOH HOH . E 4 HOH E 78 574 574 HOH HOH . E 4 HOH E 79 575 575 HOH HOH . E 4 HOH E 80 576 576 HOH HOH . E 4 HOH E 81 577 577 HOH HOH . E 4 HOH E 82 578 578 HOH HOH . E 4 HOH E 83 579 579 HOH HOH . E 4 HOH E 84 580 580 HOH HOH . E 4 HOH E 85 581 581 HOH HOH . E 4 HOH E 86 582 582 HOH HOH . E 4 HOH E 87 583 583 HOH HOH . E 4 HOH E 88 584 584 HOH HOH . E 4 HOH E 89 585 585 HOH HOH . E 4 HOH E 90 586 586 HOH HOH . E 4 HOH E 91 587 587 HOH HOH . E 4 HOH E 92 588 588 HOH HOH . E 4 HOH E 93 589 589 HOH HOH . E 4 HOH E 94 590 590 HOH HOH . E 4 HOH E 95 592 592 HOH HOH . E 4 HOH E 96 593 593 HOH HOH . E 4 HOH E 97 594 594 HOH HOH . E 4 HOH E 98 595 595 HOH HOH . E 4 HOH E 99 596 596 HOH HOH . E 4 HOH E 100 597 597 HOH HOH . E 4 HOH E 101 598 598 HOH HOH . E 4 HOH E 102 599 599 HOH HOH . E 4 HOH E 103 600 600 HOH HOH . E 4 HOH E 104 601 601 HOH HOH . E 4 HOH E 105 602 602 HOH HOH . E 4 HOH E 106 603 603 HOH HOH . E 4 HOH E 107 604 604 HOH HOH . E 4 HOH E 108 605 605 HOH HOH . E 4 HOH E 109 607 607 HOH HOH . E 4 HOH E 110 608 608 HOH HOH . E 4 HOH E 111 609 609 HOH HOH . E 4 HOH E 112 610 610 HOH HOH . E 4 HOH E 113 611 611 HOH HOH . E 4 HOH E 114 612 612 HOH HOH . E 4 HOH E 115 613 613 HOH HOH . E 4 HOH E 116 614 614 HOH HOH . E 4 HOH E 117 615 615 HOH HOH . E 4 HOH E 118 616 616 HOH HOH . E 4 HOH E 119 617 617 HOH HOH . E 4 HOH E 120 645 645 HOH HOH . E 4 HOH E 121 649 649 HOH HOH . E 4 HOH E 122 654 654 HOH HOH . E 4 HOH E 123 660 660 HOH HOH . E 4 HOH E 124 665 665 HOH HOH . E 4 HOH E 125 675 675 HOH HOH . E 4 HOH E 126 679 679 HOH HOH . E 4 HOH E 127 682 682 HOH HOH . E 4 HOH E 128 684 684 HOH HOH . E 4 HOH E 129 693 693 HOH HOH . E 4 HOH E 130 694 694 HOH HOH . E 4 HOH E 131 704 704 HOH HOH . F 4 HOH I 1 519 519 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 65.251 _atom_site.Cartn_y 51.193 _atom_site.Cartn_z 15.447 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 488 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #