data_1BNU # _model_server_result.job_id oxZrcQhDHBZ6jJz0MJvEhg _model_server_result.datetime_utc '2024-10-24 04:30:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bnu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":555}' # _entry.id 1BNU # _exptl.entry_id 1BNU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.483 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,4-DIHYDRO-4-HYDROXY-2-(2-THIENYMETHYL)-2H-THIENO[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE-1,1-DIOXIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.6 _cell.angle_gamma 90 _cell.entry_id 1BNU _cell.length_a 42.7 _cell.length_b 41.7 _cell.length_c 73 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BNU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 94 1_555 C ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc2 A NE2 HIS 95 A HIS 96 1_555 C ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc3 A ND1 HIS 118 A HIS 119 1_555 C ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc4 A O GLN 135 A GLN 137 1_555 B HG HG . A HG 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.098 ? metalc ? metalc5 A N GLN 135 A GLN 137 1_555 B HG HG . A HG 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.461 ? metalc ? metalc6 A SG CYS 204 A CYS 206 1_555 B HG HG . A HG 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc7 C ZN ZN . A ZN 262 1_555 D N21 AL3 . A AL3 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc8 C ZN ZN . A ZN 262 1_555 D S1 AL3 . A AL3 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? metalc ? metalc9 E O HOH . A HOH 323 1_555 B HG HG . A HG 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.379 ? # _chem_comp.formula 'C11 H12 N2 O5 S4' _chem_comp.formula_weight 380.483 _chem_comp.id AL3 _chem_comp.mon_nstd_flag . _chem_comp.name 3,4-DIHYDRO-4-HYDROXY-2-(2-THIENYMETHYL)-2H-THIENO[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE-1,1-DIOXIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms AL5300 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 S1 AL3 sing 1 n n C3 C4 AL3 doub 2 n y C3 S2 AL3 sing 3 n y O5 C10 AL3 sing 4 n n O5 HO5 AL3 sing 5 n n C9 C10 AL3 sing 6 n n C9 N8 AL3 sing 7 n n C9 H91 AL3 sing 8 n n C9 H92 AL3 sing 9 n n C10 C5 AL3 sing 10 n n C10 H10 AL3 sing 11 n n C11 C12 AL3 sing 12 n n C11 N8 AL3 sing 13 n n C11 H111 AL3 sing 14 n n C11 H112 AL3 sing 15 n n C12 C13 AL3 doub 16 n y C12 S16 AL3 sing 17 n y C13 C14 AL3 sing 18 n y C13 H13 AL3 sing 19 n n C14 C15 AL3 doub 20 n y C14 H14 AL3 sing 21 n n C15 S16 AL3 sing 22 n y C15 H15 AL3 sing 23 n n O1A S1 AL3 doub 24 n n O2A S1 AL3 doub 25 n n N21 S1 AL3 sing 26 n n N21 HNL1 AL3 sing 27 n n N21 HNL2 AL3 sing 28 n n C4 C5 AL3 sing 29 n y C4 H4 AL3 sing 30 n n C5 C6 AL3 doub 31 n y C6 S2 AL3 sing 32 n y C6 S7 AL3 sing 33 n n S7 O3B AL3 doub 34 n n S7 O4B AL3 doub 35 n n S7 N8 AL3 sing 36 n n # _atom_sites.entry_id 1BNU _atom_sites.fract_transf_matrix[1][1] 0.023419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0061 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HG A 1 362 362 HG HG . C 3 ZN A 1 262 262 ZN ZN . D 4 AL3 A 1 555 555 AL3 AL3 . E 5 HOH A 1 266 266 HOH HOH . E 5 HOH A 2 267 267 HOH HOH . E 5 HOH A 3 268 268 HOH HOH . E 5 HOH A 4 269 269 HOH HOH . E 5 HOH A 5 270 270 HOH HOH . E 5 HOH A 6 271 271 HOH HOH . E 5 HOH A 7 273 273 HOH HOH . E 5 HOH A 8 274 274 HOH HOH . E 5 HOH A 9 275 275 HOH HOH . E 5 HOH A 10 276 276 HOH HOH . E 5 HOH A 11 278 278 HOH HOH . E 5 HOH A 12 279 279 HOH HOH . E 5 HOH A 13 281 281 HOH HOH . E 5 HOH A 14 282 282 HOH HOH . E 5 HOH A 15 283 283 HOH HOH . E 5 HOH A 16 284 284 HOH HOH . E 5 HOH A 17 286 286 HOH HOH . E 5 HOH A 18 287 287 HOH HOH . E 5 HOH A 19 288 288 HOH HOH . E 5 HOH A 20 289 289 HOH HOH . E 5 HOH A 21 291 291 HOH HOH . E 5 HOH A 22 295 295 HOH HOH . E 5 HOH A 23 298 298 HOH HOH . E 5 HOH A 24 299 299 HOH HOH . E 5 HOH A 25 302 302 HOH HOH . E 5 HOH A 26 303 303 HOH HOH . E 5 HOH A 27 304 304 HOH HOH . E 5 HOH A 28 308 308 HOH HOH . E 5 HOH A 29 310 310 HOH HOH . E 5 HOH A 30 311 311 HOH HOH . E 5 HOH A 31 323 323 HOH HOH . E 5 HOH A 32 324 324 HOH HOH . E 5 HOH A 33 325 325 HOH HOH . E 5 HOH A 34 326 326 HOH HOH . E 5 HOH A 35 328 328 HOH HOH . E 5 HOH A 36 330 330 HOH HOH . E 5 HOH A 37 331 331 HOH HOH . E 5 HOH A 38 332 332 HOH HOH . E 5 HOH A 39 336 336 HOH HOH . E 5 HOH A 40 340 340 HOH HOH . E 5 HOH A 41 341 341 HOH HOH . E 5 HOH A 42 346 346 HOH HOH . E 5 HOH A 43 354 354 HOH HOH . E 5 HOH A 44 355 355 HOH HOH . E 5 HOH A 45 357 357 HOH HOH . E 5 HOH A 46 358 358 HOH HOH . E 5 HOH A 47 359 359 HOH HOH . E 5 HOH A 48 360 360 HOH HOH . E 5 HOH A 49 361 361 HOH HOH . E 5 HOH A 50 365 365 HOH HOH . E 5 HOH A 51 366 366 HOH HOH . E 5 HOH A 52 367 367 HOH HOH . E 5 HOH A 53 370 370 HOH HOH . E 5 HOH A 54 375 375 HOH HOH . E 5 HOH A 55 376 376 HOH HOH . E 5 HOH A 56 382 382 HOH HOH . E 5 HOH A 57 413 413 HOH HOH . E 5 HOH A 58 417 417 HOH HOH . E 5 HOH A 59 424 424 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 AL3 . . . D 4 -5.387 2.133 15.872 1 11.65 ? C3 AL3 555 A 1 HETATM 2 O O5 AL3 . . . D 4 -2.31 3.026 12.87 1 27.46 ? O5 AL3 555 A 1 HETATM 3 C C9 AL3 . . . D 4 -3.396 5.167 12.736 1 25.47 ? C9 AL3 555 A 1 HETATM 4 C C10 AL3 . . . D 4 -2.952 4.003 13.675 1 23.69 ? C10 AL3 555 A 1 HETATM 5 C C11 AL3 . . . D 4 -3.025 6.62 14.575 1 30.39 ? C11 AL3 555 A 1 HETATM 6 C C12 AL3 . . . D 4 -2.426 7.885 14.236 1 33.23 ? C12 AL3 555 A 1 HETATM 7 C C13 AL3 . . . D 4 -2.43 8.512 13.005 1 33.85 ? C13 AL3 555 A 1 HETATM 8 C C14 AL3 . . . D 4 -1.794 9.723 13.068 1 36.46 ? C14 AL3 555 A 1 HETATM 9 C C15 AL3 . . . D 4 -1.298 10.036 14.324 1 36.15 ? C15 AL3 555 A 1 HETATM 10 O O1A AL3 . . . D 4 -5.461 0.987 18.189 1 8.67 ? O1A AL3 555 A 1 HETATM 11 O O2A AL3 . . . D 4 -7.304 0.85 16.894 1 8.43 ? O2A AL3 555 A 1 HETATM 12 N N21 AL3 . . . D 4 -5.354 -0.394 16.236 1 6.56 ? N21 AL3 555 A 1 HETATM 13 S S1 AL3 . . . D 4 -5.881 0.835 16.856 1 9.31 ? S1 AL3 555 A 1 HETATM 14 C C4 AL3 . . . D 4 -4.264 2.205 15.113 1 14.1 ? C4 AL3 555 A 1 HETATM 15 C C5 AL3 . . . D 4 -4.136 3.359 14.401 1 18.87 ? C5 AL3 555 A 1 HETATM 16 C C6 AL3 . . . D 4 -5.2 4.194 14.636 1 17.06 ? C6 AL3 555 A 1 HETATM 17 S S2 AL3 . . . D 4 -6.343 3.54 15.723 1 11.43 ? S2 AL3 555 A 1 HETATM 18 S S7 AL3 . . . D 4 -5.315 5.818 14.061 1 24 ? S7 AL3 555 A 1 HETATM 19 O O3B AL3 . . . D 4 -6.297 5.826 13.05 1 26.52 ? O3B AL3 555 A 1 HETATM 20 O O4B AL3 . . . D 4 -5.848 6.635 15.102 1 22.52 ? O4B AL3 555 A 1 HETATM 21 N N8 AL3 . . . D 4 -3.984 6.239 13.536 1 25.21 ? N8 AL3 555 A 1 HETATM 22 S S16 AL3 . . . D 4 -1.632 8.781 15.467 1 36.6 ? S16 AL3 555 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #