data_1BO5 # _model_server_result.job_id Cu0ziV7CufG9RAAHhoG80g _model_server_result.datetime_utc '2024-10-24 04:30:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bo5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 1BO5 # _exptl.entry_id 1BO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BO5 _cell.length_a 169.41 _cell.length_b 169.41 _cell.length_c 204.676 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PQS dimeric 2 software_defined_assembly 3 PQS dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 A,C,D 3 1,2 B,E 4 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 204.676 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FBP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FBP doub 83 n n P1 O2P FBP sing 84 n n P1 O3P FBP sing 85 n n P1 O1 FBP sing 86 n n O2P HOP2 FBP sing 87 n n O3P HOP3 FBP sing 88 n n O1 C1 FBP sing 89 n n C1 C2 FBP sing 90 n n C1 H11 FBP sing 91 n n C1 H12 FBP sing 92 n n C2 O2 FBP sing 93 n n C2 C3 FBP sing 94 n n C2 O5 FBP sing 95 n n O2 HO2 FBP sing 96 n n C3 O3 FBP sing 97 n n C3 C4 FBP sing 98 n n C3 H3 FBP sing 99 n n O3 HO3 FBP sing 100 n n C4 O4 FBP sing 101 n n C4 C5 FBP sing 102 n n C4 H4 FBP sing 103 n n O4 HO4 FBP sing 104 n n C5 O5 FBP sing 105 n n C5 C6 FBP sing 106 n n C5 H5 FBP sing 107 n n C6 O6 FBP sing 108 n n C6 H61 FBP sing 109 n n C6 H62 FBP sing 110 n n O6 P2 FBP sing 111 n n P2 O4P FBP doub 112 n n P2 O5P FBP sing 113 n n P2 O6P FBP sing 114 n n O5P HOP5 FBP sing 115 n n O6P HOP6 FBP sing 116 n n # _pdbx_chem_comp_identifier.comp_id FBP _pdbx_chem_comp_identifier.identifier b-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1BO5 _atom_sites.fract_transf_matrix[1][1] 0.005903 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FBP O 1 502 1 FBP FBP . D 3 GOL O 1 601 601 GOL GOL . E 3 GOL Z 1 601 601 GOL GOL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FBP . A . C 2 7.828 71.76 73.811 0.5 49.35 ? P1 FBP 502 O 1 HETATM 2 P P1 FBP . B . C 2 18.666 80.863 71.613 0.5 49.35 ? P1 FBP 502 O 1 HETATM 3 O O1P FBP . A . C 2 9.016 71.311 74.571 0.5 49.35 ? O1P FBP 502 O 1 HETATM 4 O O1P FBP . B . C 2 18.778 79.79 72.626 0.5 49.35 ? O1P FBP 502 O 1 HETATM 5 O O2P FBP . A . C 2 6.777 71.978 74.843 0.5 49.35 ? O2P FBP 502 O 1 HETATM 6 O O2P FBP . B . C 2 19.683 80.606 70.561 0.5 49.35 ? O2P FBP 502 O 1 HETATM 7 O O3P FBP . A . C 2 7.719 70.874 72.614 0.5 49.35 ? O3P FBP 502 O 1 HETATM 8 O O3P FBP . B . C 2 18.693 82.157 72.336 0.5 49.35 ? O3P FBP 502 O 1 HETATM 9 O O1 FBP . A . C 2 8.131 73.224 73.252 0.5 49.35 ? O1 FBP 502 O 1 HETATM 10 O O1 FBP . B . C 2 17.225 80.745 70.923 0.5 49.35 ? O1 FBP 502 O 1 HETATM 11 C C1 FBP . A . C 2 7.991 74.328 74.154 0.5 49.35 ? C1 FBP 502 O 1 HETATM 12 C C1 FBP . B . C 2 16.959 79.942 69.769 0.5 49.35 ? C1 FBP 502 O 1 HETATM 13 C C2 FBP . A . C 2 8.418 75.611 73.432 0.5 49.35 ? C2 FBP 502 O 1 HETATM 14 C C2 FBP . B . C 2 15.547 79.352 69.917 0.5 49.35 ? C2 FBP 502 O 1 HETATM 15 O O2 FBP . A . C 2 7.674 76.771 73.803 0.5 49.35 ? O2 FBP 502 O 1 HETATM 16 O O2 FBP . B . C 2 15.419 78.082 69.287 0.5 49.35 ? O2 FBP 502 O 1 HETATM 17 C C3 FBP . A . C 2 7.937 75.735 72.014 0.5 49.35 ? C3 FBP 502 O 1 HETATM 18 C C3 FBP . B . C 2 14.436 80.143 69.245 0.5 49.35 ? C3 FBP 502 O 1 HETATM 19 O O3 FBP . A . C 2 6.778 76.541 71.958 0.5 49.35 ? O3 FBP 502 O 1 HETATM 20 O O3 FBP . B . C 2 14.35 79.892 67.848 0.5 49.35 ? O3 FBP 502 O 1 HETATM 21 C C4 FBP . A . C 2 9.098 76.424 71.306 0.5 49.35 ? C4 FBP 502 O 1 HETATM 22 C C4 FBP . B . C 2 13.214 79.556 69.933 0.5 49.35 ? C4 FBP 502 O 1 HETATM 23 O O4 FBP . A . C 2 9.295 75.89 70.012 0.5 49.35 ? O4 FBP 502 O 1 HETATM 24 O O4 FBP . B . C 2 12.115 80.465 69.927 0.5 49.35 ? O4 FBP 502 O 1 HETATM 25 C C5 FBP . A . C 2 10.259 75.992 72.124 0.5 49.35 ? C5 FBP 502 O 1 HETATM 26 C C5 FBP . B . C 2 13.721 79.443 71.341 0.5 49.35 ? C5 FBP 502 O 1 HETATM 27 O O5 FBP . A . C 2 9.827 75.959 73.478 0.5 49.35 ? O5 FBP 502 O 1 HETATM 28 O O5 FBP . B . C 2 15.138 79.168 71.299 0.5 49.35 ? O5 FBP 502 O 1 HETATM 29 C C6 FBP . A . C 2 11.46 76.911 71.98 0.5 49.35 ? C6 FBP 502 O 1 HETATM 30 C C6 FBP . B . C 2 12.99 78.378 72.15 0.5 49.35 ? C6 FBP 502 O 1 HETATM 31 O O6 FBP . A . C 2 12.504 76.141 71.401 0.5 49.35 ? O6 FBP 502 O 1 HETATM 32 O O6 FBP . B . C 2 13.965 77.484 72.666 0.5 49.35 ? O6 FBP 502 O 1 HETATM 33 P P2 FBP . A . C 2 13.782 75.973 72.324 0.5 49.35 ? P2 FBP 502 O 1 HETATM 34 P P2 FBP . B . C 2 13.497 75.991 72.925 0.5 49.35 ? P2 FBP 502 O 1 HETATM 35 O O4P FBP . A . C 2 14.749 77.023 71.965 0.5 49.35 ? O4P FBP 502 O 1 HETATM 36 O O4P FBP . B . C 2 12.054 75.995 73.261 0.5 49.35 ? O4P FBP 502 O 1 HETATM 37 O O5P FBP . A . C 2 13.353 76.195 73.723 0.5 49.35 ? O5P FBP 502 O 1 HETATM 38 O O5P FBP . B . C 2 13.67 75.28 71.638 0.5 49.35 ? O5P FBP 502 O 1 HETATM 39 O O6P FBP . A . C 2 14.416 74.697 71.953 0.5 49.35 ? O6P FBP 502 O 1 HETATM 40 O O6P FBP . B . C 2 14.228 75.513 74.123 0.5 49.35 ? O6P FBP 502 O 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 40 #