data_1BOB # _model_server_result.job_id NUGrqPJJsH3JGACs2UUiHg _model_server_result.datetime_utc '2025-01-25 14:06:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 1BOB # _exptl.entry_id 1BOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.3 _cell.angle_gamma 90 _cell.entry_id 1BOB _cell.length_a 111.3 _cell.length_b 47.9 _cell.length_c 75.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 256 A ASP 256 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc2 A OD2 ASP 256 A ASP 256 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc3 A OD2 ASP 256 A ASP 256 2_655 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc4 B CA CA . A CA 321 1_555 D O HOH . A HOH 460 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? metalc ? metalc5 B CA CA . A CA 321 1_555 D O HOH . A HOH 479 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 3.127 ? # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 1BOB _atom_sites.fract_transf_matrix[1][1] 0.008985 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000047 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020877 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 321 7 CA CA . C 3 ACO A 1 400 400 ACO ACO . D 4 HOH A 1 401 2 HOH HOH . D 4 HOH A 2 402 4 HOH HOH . D 4 HOH A 3 403 5 HOH HOH . D 4 HOH A 4 404 6 HOH HOH . D 4 HOH A 5 405 8 HOH HOH . D 4 HOH A 6 406 9 HOH HOH . D 4 HOH A 7 407 10 HOH HOH . D 4 HOH A 8 408 11 HOH HOH . D 4 HOH A 9 409 13 HOH HOH . D 4 HOH A 10 410 14 HOH HOH . D 4 HOH A 11 411 15 HOH HOH . D 4 HOH A 12 412 16 HOH HOH . D 4 HOH A 13 413 17 HOH HOH . D 4 HOH A 14 414 18 HOH HOH . D 4 HOH A 15 415 19 HOH HOH . D 4 HOH A 16 416 20 HOH HOH . D 4 HOH A 17 417 21 HOH HOH . D 4 HOH A 18 418 22 HOH HOH . D 4 HOH A 19 419 23 HOH HOH . D 4 HOH A 20 420 24 HOH HOH . D 4 HOH A 21 421 26 HOH HOH . D 4 HOH A 22 422 29 HOH HOH . D 4 HOH A 23 423 30 HOH HOH . D 4 HOH A 24 424 31 HOH HOH . D 4 HOH A 25 425 33 HOH HOH . D 4 HOH A 26 426 34 HOH HOH . D 4 HOH A 27 427 35 HOH HOH . D 4 HOH A 28 428 36 HOH HOH . D 4 HOH A 29 429 37 HOH HOH . D 4 HOH A 30 430 38 HOH HOH . D 4 HOH A 31 431 39 HOH HOH . D 4 HOH A 32 432 40 HOH HOH . D 4 HOH A 33 433 41 HOH HOH . D 4 HOH A 34 434 42 HOH HOH . D 4 HOH A 35 435 44 HOH HOH . D 4 HOH A 36 436 45 HOH HOH . D 4 HOH A 37 437 47 HOH HOH . D 4 HOH A 38 438 48 HOH HOH . D 4 HOH A 39 439 50 HOH HOH . D 4 HOH A 40 440 51 HOH HOH . D 4 HOH A 41 441 52 HOH HOH . D 4 HOH A 42 442 57 HOH HOH . D 4 HOH A 43 443 58 HOH HOH . D 4 HOH A 44 444 60 HOH HOH . D 4 HOH A 45 445 62 HOH HOH . D 4 HOH A 46 446 63 HOH HOH . D 4 HOH A 47 447 64 HOH HOH . D 4 HOH A 48 448 65 HOH HOH . D 4 HOH A 49 449 67 HOH HOH . D 4 HOH A 50 450 68 HOH HOH . D 4 HOH A 51 451 69 HOH HOH . D 4 HOH A 52 452 70 HOH HOH . D 4 HOH A 53 453 72 HOH HOH . D 4 HOH A 54 454 73 HOH HOH . D 4 HOH A 55 455 74 HOH HOH . D 4 HOH A 56 456 76 HOH HOH . D 4 HOH A 57 457 77 HOH HOH . D 4 HOH A 58 458 78 HOH HOH . D 4 HOH A 59 459 79 HOH HOH . D 4 HOH A 60 460 80 HOH HOH . D 4 HOH A 61 461 81 HOH HOH . D 4 HOH A 62 462 82 HOH HOH . D 4 HOH A 63 463 83 HOH HOH . D 4 HOH A 64 464 102 HOH HOH . D 4 HOH A 65 465 103 HOH HOH . D 4 HOH A 66 466 104 HOH HOH . D 4 HOH A 67 467 105 HOH HOH . D 4 HOH A 68 468 108 HOH HOH . D 4 HOH A 69 469 110 HOH HOH . D 4 HOH A 70 470 111 HOH HOH . D 4 HOH A 71 471 112 HOH HOH . D 4 HOH A 72 472 113 HOH HOH . D 4 HOH A 73 473 114 HOH HOH . D 4 HOH A 74 474 115 HOH HOH . D 4 HOH A 75 475 117 HOH HOH . D 4 HOH A 76 476 119 HOH HOH . D 4 HOH A 77 477 120 HOH HOH . D 4 HOH A 78 478 121 HOH HOH . D 4 HOH A 79 479 123 HOH HOH . D 4 HOH A 80 480 130 HOH HOH . D 4 HOH A 81 481 131 HOH HOH . D 4 HOH A 82 482 132 HOH HOH . D 4 HOH A 83 483 133 HOH HOH . D 4 HOH A 84 484 201 HOH HOH . D 4 HOH A 85 485 204 HOH HOH . D 4 HOH A 86 486 205 HOH HOH . D 4 HOH A 87 487 207 HOH HOH . D 4 HOH A 88 488 208 HOH HOH . D 4 HOH A 89 489 210 HOH HOH . D 4 HOH A 90 490 211 HOH HOH . D 4 HOH A 91 491 213 HOH HOH . D 4 HOH A 92 492 215 HOH HOH . D 4 HOH A 93 493 216 HOH HOH . D 4 HOH A 94 494 217 HOH HOH . D 4 HOH A 95 495 218 HOH HOH . D 4 HOH A 96 496 301 HOH HOH . D 4 HOH A 97 497 302 HOH HOH . D 4 HOH A 98 498 303 HOH HOH . D 4 HOH A 99 499 304 HOH HOH . D 4 HOH A 100 500 305 HOH HOH . D 4 HOH A 101 501 306 HOH HOH . D 4 HOH A 102 502 310 HOH HOH . D 4 HOH A 103 503 311 HOH HOH . D 4 HOH A 104 504 316 HOH HOH . D 4 HOH A 105 505 318 HOH HOH . D 4 HOH A 106 506 320 HOH HOH . D 4 HOH A 107 507 321 HOH HOH . D 4 HOH A 108 508 322 HOH HOH . D 4 HOH A 109 509 323 HOH HOH . D 4 HOH A 110 510 325 HOH HOH . D 4 HOH A 111 511 328 HOH HOH . D 4 HOH A 112 512 329 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . C 3 29.337 20.147 1.345 1 69.28 ? N1A ACO 400 A 1 HETATM 2 C C2A ACO . . . C 3 30.473 19.498 0.869 1 67.44 ? C2A ACO 400 A 1 HETATM 3 N N3A ACO . . . C 3 31.331 19.941 -0.064 1 67.02 ? N3A ACO 400 A 1 HETATM 4 C C4A ACO . . . C 3 30.993 21.142 -0.54 1 68.62 ? C4A ACO 400 A 1 HETATM 5 C C5A ACO . . . C 3 29.877 21.947 -0.171 1 67.77 ? C5A ACO 400 A 1 HETATM 6 C C6A ACO . . . C 3 28.978 21.386 0.863 1 68.4 ? C6A ACO 400 A 1 HETATM 7 N N6A ACO . . . C 3 27.93 22.008 1.288 1 66.1 ? N6A ACO 400 A 1 HETATM 8 N N7A ACO . . . C 3 29.84 23.114 -0.855 1 69.25 ? N7A ACO 400 A 1 HETATM 9 C C8A ACO . . . C 3 30.926 23.069 -1.667 1 71.44 ? C8A ACO 400 A 1 HETATM 10 N N9A ACO . . . C 3 31.664 21.897 -1.521 1 72.19 ? N9A ACO 400 A 1 HETATM 11 C C1B ACO . . . C 3 32.954 21.524 -2.202 1 66.75 ? C1B ACO 400 A 1 HETATM 12 C C2B ACO . . . C 3 33.676 22.749 -2.747 1 63.41 ? C2B ACO 400 A 1 HETATM 13 O O2B ACO . . . C 3 33.574 22.712 -4.146 1 56.91 ? O2B ACO 400 A 1 HETATM 14 C C3B ACO . . . C 3 35.149 22.689 -2.238 1 63.65 ? C3B ACO 400 A 1 HETATM 15 O O3B ACO . . . C 3 36.126 22.345 -3.228 1 68.6 ? O3B ACO 400 A 1 HETATM 16 P P3B ACO . . . C 3 36.663 20.699 -3.375 1 61.42 ? P3B ACO 400 A 1 HETATM 17 O O7A ACO . . . C 3 37.459 20.314 -2.058 1 65.08 ? O7A ACO 400 A 1 HETATM 18 O O8A ACO . . . C 3 37.74 20.575 -4.536 1 62.05 ? O8A ACO 400 A 1 HETATM 19 O O9A ACO . . . C 3 35.407 19.759 -3.575 1 68.19 ? O9A ACO 400 A 1 HETATM 20 C C4B ACO . . . C 3 35.042 21.762 -1.019 1 59.73 ? C4B ACO 400 A 1 HETATM 21 O O4B ACO . . . C 3 33.771 21.047 -1.135 1 68.16 ? O4B ACO 400 A 1 HETATM 22 C C5B ACO . . . C 3 34.746 22.374 0.298 1 53.34 ? C5B ACO 400 A 1 HETATM 23 O O5B ACO . . . C 3 35.281 23.716 0.526 1 47.55 ? O5B ACO 400 A 1 HETATM 24 P P1A ACO . . . C 3 34.516 25.157 0.176 1 32.49 ? P1A ACO 400 A 1 HETATM 25 O O1A ACO . . . C 3 33.281 25.255 1.007 1 34.3 ? O1A ACO 400 A 1 HETATM 26 O O2A ACO . . . C 3 34.421 25.476 -1.279 1 44.61 ? O2A ACO 400 A 1 HETATM 27 O O3A ACO . . . C 3 35.63 25.989 0.834 1 43.94 ? O3A ACO 400 A 1 HETATM 28 P P2A ACO . . . C 3 35.905 26.239 2.451 1 27.82 ? P2A ACO 400 A 1 HETATM 29 O O4A ACO . . . C 3 36.039 24.935 3.181 1 23.99 ? O4A ACO 400 A 1 HETATM 30 O O5A ACO . . . C 3 34.838 27.078 3.119 1 25.64 ? O5A ACO 400 A 1 HETATM 31 O O6A ACO . . . C 3 37.286 27.101 2.388 1 33.06 ? O6A ACO 400 A 1 HETATM 32 C CBP ACO . . . C 3 39.699 26.807 2.738 1 23.58 ? CBP ACO 400 A 1 HETATM 33 C CCP ACO . . . C 3 38.463 26.524 1.819 1 31.35 ? CCP ACO 400 A 1 HETATM 34 C CDP ACO . . . C 3 40.99 26.095 2.233 1 22.4 ? CDP ACO 400 A 1 HETATM 35 C CEP ACO . . . C 3 39.817 28.331 2.644 1 19.74 ? CEP ACO 400 A 1 HETATM 36 C CAP ACO . . . C 3 39.404 26.301 4.203 1 28.3 ? CAP ACO 400 A 1 HETATM 37 O OAP ACO . . . C 3 39.328 24.846 4.239 1 27.37 ? OAP ACO 400 A 1 HETATM 38 C C9P ACO . . . C 3 40.482 26.783 5.185 1 27.18 ? C9P ACO 400 A 1 HETATM 39 O O9P ACO . . . C 3 40.421 28.03 5.717 1 27.83 ? O9P ACO 400 A 1 HETATM 40 N N8P ACO . . . C 3 41.444 25.921 5.432 1 25.14 ? N8P ACO 400 A 1 HETATM 41 C C7P ACO . . . C 3 42.57 26.141 6.332 1 15.07 ? C7P ACO 400 A 1 HETATM 42 C C6P ACO . . . C 3 43.271 27.421 5.933 1 21.31 ? C6P ACO 400 A 1 HETATM 43 C C5P ACO . . . C 3 43.886 27.292 4.56 1 29.06 ? C5P ACO 400 A 1 HETATM 44 O O5P ACO . . . C 3 44.395 26.193 4.116 1 29.94 ? O5P ACO 400 A 1 HETATM 45 N N4P ACO . . . C 3 43.845 28.404 3.87 1 27.23 ? N4P ACO 400 A 1 HETATM 46 C C3P ACO . . . C 3 44.377 28.572 2.461 1 30.62 ? C3P ACO 400 A 1 HETATM 47 C C2P ACO . . . C 3 45.709 29.284 2.586 1 32.72 ? C2P ACO 400 A 1 HETATM 48 S S1P ACO . . . C 3 46.397 29.801 0.955 1 36.78 ? S1P ACO 400 A 1 HETATM 49 C C ACO . . . C 3 45.969 31.531 0.751 1 36.6 ? C ACO 400 A 1 HETATM 50 O O ACO . . . C 3 45.761 31.954 1.847 1 36.1 ? O ACO 400 A 1 HETATM 51 C CH3 ACO . . . C 3 46.681 32.191 -0.086 1 34.71 ? CH3 ACO 400 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 51 #