data_1BOF # _model_server_result.job_id Htv3Z4-VGX2TcKAtKR99kg _model_server_result.datetime_utc '2024-11-15 07:30:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":804}' # _entry.id 1BOF # _exptl.entry_id 1BOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BOF _cell.length_a 121.747 _cell.length_b 121.747 _cell.length_c 68.929 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 46 A SER 47 1_555 C MG MG . A MG 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc2 A OG1 THR 180 A THR 181 1_555 C MG MG . A MG 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc3 E O3B GDP . A GDP 355 1_555 C MG MG . A MG 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc4 C MG MG . A MG 800 1_555 F O HOH . A HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc5 C MG MG . A MG 800 1_555 F O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc6 C MG MG . A MG 800 1_555 F O HOH . A HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 335 n n S O2 SO4 doub 336 n n S O3 SO4 sing 337 n n S O4 SO4 sing 338 n n # _atom_sites.entry_id 1BOF _atom_sites.fract_transf_matrix[1][1] 0.008214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 356 356 SO4 SO4 . C 3 MG A 1 800 800 MG MG . D 2 SO4 A 1 804 804 SO4 SO4 . E 4 GDP A 1 355 355 GDP GDP . F 5 HOH A 1 401 401 HOH HOH . F 5 HOH A 2 402 402 HOH HOH . F 5 HOH A 3 403 403 HOH HOH . F 5 HOH A 4 404 404 HOH HOH . F 5 HOH A 5 405 405 HOH HOH . F 5 HOH A 6 406 406 HOH HOH . F 5 HOH A 7 407 407 HOH HOH . F 5 HOH A 8 408 408 HOH HOH . F 5 HOH A 9 409 409 HOH HOH . F 5 HOH A 10 410 410 HOH HOH . F 5 HOH A 11 411 411 HOH HOH . F 5 HOH A 12 412 412 HOH HOH . F 5 HOH A 13 413 413 HOH HOH . F 5 HOH A 14 414 414 HOH HOH . F 5 HOH A 15 415 415 HOH HOH . F 5 HOH A 16 416 416 HOH HOH . F 5 HOH A 17 417 417 HOH HOH . F 5 HOH A 18 418 418 HOH HOH . F 5 HOH A 19 419 419 HOH HOH . F 5 HOH A 20 420 420 HOH HOH . F 5 HOH A 21 421 421 HOH HOH . F 5 HOH A 22 422 422 HOH HOH . F 5 HOH A 23 423 423 HOH HOH . F 5 HOH A 24 424 424 HOH HOH . F 5 HOH A 25 425 425 HOH HOH . F 5 HOH A 26 426 426 HOH HOH . F 5 HOH A 27 427 427 HOH HOH . F 5 HOH A 28 428 428 HOH HOH . F 5 HOH A 29 429 429 HOH HOH . F 5 HOH A 30 431 431 HOH HOH . F 5 HOH A 31 432 432 HOH HOH . F 5 HOH A 32 433 433 HOH HOH . F 5 HOH A 33 434 434 HOH HOH . F 5 HOH A 34 435 435 HOH HOH . F 5 HOH A 35 436 436 HOH HOH . F 5 HOH A 36 437 437 HOH HOH . F 5 HOH A 37 438 438 HOH HOH . F 5 HOH A 38 439 439 HOH HOH . F 5 HOH A 39 440 440 HOH HOH . F 5 HOH A 40 441 441 HOH HOH . F 5 HOH A 41 442 442 HOH HOH . F 5 HOH A 42 443 443 HOH HOH . F 5 HOH A 43 600 600 HOH HOH . F 5 HOH A 44 601 601 HOH HOH . F 5 HOH A 45 603 603 HOH HOH . F 5 HOH A 46 629 629 HOH HOH . F 5 HOH A 47 801 801 HOH HOH . F 5 HOH A 48 802 802 HOH HOH . F 5 HOH A 49 803 803 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 35.06 21.437 40.411 1 58.21 ? S SO4 804 A 1 HETATM 2 O O1 SO4 . . . D 2 35.246 22.847 40.492 1 52.6 ? O1 SO4 804 A 1 HETATM 3 O O2 SO4 . . . D 2 35.633 20.766 41.532 1 54.19 ? O2 SO4 804 A 1 HETATM 4 O O3 SO4 . . . D 2 35.77 20.974 39.294 1 51.88 ? O3 SO4 804 A 1 HETATM 5 O O4 SO4 . . . D 2 33.66 21.122 40.274 1 53.73 ? O4 SO4 804 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #