data_1BP4 # _model_server_result.job_id sOTXdkDWa1XfklpxVlA86g _model_server_result.datetime_utc '2024-10-19 10:16:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bp4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 1BP4 # _exptl.entry_id 1BP4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.637 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.9 _cell.angle_gamma 90 _cell.entry_id 1BP4 _cell.length_a 100.54 _cell.length_b 50.74 _cell.length_c 62.28 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BP4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 153 A CYS 153 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C26 H43 N3 O5' _chem_comp.formula_weight 477.637 _chem_comp.id ALD _chem_comp.mon_nstd_flag . _chem_comp.name N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BP4 _atom_sites.fract_transf_matrix[1][1] 0.009946 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001736 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016299 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ALD A 1 301 213 ALD ALD . C 3 HOH A 1 401 400 HOH HOH . C 3 HOH A 2 402 401 HOH HOH . C 3 HOH A 3 403 403 HOH HOH . C 3 HOH A 4 404 404 HOH HOH . C 3 HOH A 5 405 405 HOH HOH . C 3 HOH A 6 406 406 HOH HOH . C 3 HOH A 7 407 407 HOH HOH . C 3 HOH A 8 408 408 HOH HOH . C 3 HOH A 9 409 409 HOH HOH . C 3 HOH A 10 410 410 HOH HOH . C 3 HOH A 11 411 411 HOH HOH . C 3 HOH A 12 412 412 HOH HOH . C 3 HOH A 13 413 413 HOH HOH . C 3 HOH A 14 414 414 HOH HOH . C 3 HOH A 15 415 415 HOH HOH . C 3 HOH A 16 416 416 HOH HOH . C 3 HOH A 17 417 417 HOH HOH . C 3 HOH A 18 418 418 HOH HOH . C 3 HOH A 19 419 419 HOH HOH . C 3 HOH A 20 420 420 HOH HOH . C 3 HOH A 21 421 421 HOH HOH . C 3 HOH A 22 422 422 HOH HOH . C 3 HOH A 23 423 423 HOH HOH . C 3 HOH A 24 424 424 HOH HOH . C 3 HOH A 25 425 425 HOH HOH . C 3 HOH A 26 426 426 HOH HOH . C 3 HOH A 27 427 427 HOH HOH . C 3 HOH A 28 428 428 HOH HOH . C 3 HOH A 29 429 429 HOH HOH . C 3 HOH A 30 430 430 HOH HOH . C 3 HOH A 31 431 431 HOH HOH . C 3 HOH A 32 432 432 HOH HOH . C 3 HOH A 33 433 434 HOH HOH . C 3 HOH A 34 434 435 HOH HOH . C 3 HOH A 35 435 436 HOH HOH . C 3 HOH A 36 436 437 HOH HOH . C 3 HOH A 37 437 438 HOH HOH . C 3 HOH A 38 438 439 HOH HOH . C 3 HOH A 39 439 440 HOH HOH . C 3 HOH A 40 440 441 HOH HOH . C 3 HOH A 41 441 442 HOH HOH . C 3 HOH A 42 442 443 HOH HOH . C 3 HOH A 43 443 444 HOH HOH . C 3 HOH A 44 444 445 HOH HOH . C 3 HOH A 45 445 446 HOH HOH . C 3 HOH A 46 446 447 HOH HOH . C 3 HOH A 47 447 448 HOH HOH . C 3 HOH A 48 448 449 HOH HOH . C 3 HOH A 49 449 450 HOH HOH . C 3 HOH A 50 450 451 HOH HOH . C 3 HOH A 51 451 452 HOH HOH . C 3 HOH A 52 452 453 HOH HOH . C 3 HOH A 53 453 454 HOH HOH . C 3 HOH A 54 454 455 HOH HOH . C 3 HOH A 55 455 456 HOH HOH . C 3 HOH A 56 456 457 HOH HOH . C 3 HOH A 57 457 458 HOH HOH . C 3 HOH A 58 458 459 HOH HOH . C 3 HOH A 59 459 460 HOH HOH . C 3 HOH A 60 460 461 HOH HOH . C 3 HOH A 61 461 462 HOH HOH . C 3 HOH A 62 462 463 HOH HOH . C 3 HOH A 63 463 464 HOH HOH . C 3 HOH A 64 464 465 HOH HOH . C 3 HOH A 65 465 466 HOH HOH . C 3 HOH A 66 466 467 HOH HOH . C 3 HOH A 67 467 468 HOH HOH . C 3 HOH A 68 468 469 HOH HOH . C 3 HOH A 69 469 470 HOH HOH . C 3 HOH A 70 470 471 HOH HOH . C 3 HOH A 71 471 472 HOH HOH . C 3 HOH A 72 472 473 HOH HOH . C 3 HOH A 73 473 474 HOH HOH . C 3 HOH A 74 474 475 HOH HOH . C 3 HOH A 75 475 476 HOH HOH . C 3 HOH A 76 476 477 HOH HOH . C 3 HOH A 77 477 478 HOH HOH . C 3 HOH A 78 478 480 HOH HOH . C 3 HOH A 79 479 481 HOH HOH . C 3 HOH A 80 480 482 HOH HOH . C 3 HOH A 81 481 483 HOH HOH . C 3 HOH A 82 482 484 HOH HOH . C 3 HOH A 83 483 486 HOH HOH . C 3 HOH A 84 484 487 HOH HOH . C 3 HOH A 85 485 488 HOH HOH . C 3 HOH A 86 486 489 HOH HOH . C 3 HOH A 87 487 490 HOH HOH . C 3 HOH A 88 488 491 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 ALD . . . B 2 -6.707 25.364 -21.953 0.65 48.65 ? C9 ALD 301 A 1 HETATM 2 O O31 ALD . . . B 2 -7.646 24.916 -22.611 0.65 51.04 ? O31 ALD 301 A 1 HETATM 3 O O8 ALD . . . B 2 -5.438 25.541 -22.538 0.65 46.19 ? O8 ALD 301 A 1 HETATM 4 C C7 ALD . . . B 2 -5.288 26.296 -23.755 0.65 41.48 ? C7 ALD 301 A 1 HETATM 5 C C3 ALD . . . B 2 -5.432 25.785 -25.17 0.65 39.79 ? C3 ALD 301 A 1 HETATM 6 C C4 ALD . . . B 2 -4.458 26.07 -26.127 0.65 37.89 ? C4 ALD 301 A 1 HETATM 7 C C5 ALD . . . B 2 -4.579 25.603 -27.436 0.65 37.65 ? C5 ALD 301 A 1 HETATM 8 C C6 ALD . . . B 2 -5.687 24.844 -27.8 0.65 38.51 ? C6 ALD 301 A 1 HETATM 9 C C1 ALD . . . B 2 -6.671 24.552 -26.853 0.65 39.37 ? C1 ALD 301 A 1 HETATM 10 C C2 ALD . . . B 2 -6.539 25.024 -25.548 0.65 39.38 ? C2 ALD 301 A 1 HETATM 11 N N10 ALD . . . B 2 -6.814 25.71 -20.668 0.65 50.05 ? N10 ALD 301 A 1 HETATM 12 C C11 ALD . . . B 2 -8.069 25.583 -19.917 0.65 50.35 ? C11 ALD 301 A 1 HETATM 13 C C12 ALD . . . B 2 -7.807 25.969 -18.456 0.65 50.99 ? C12 ALD 301 A 1 HETATM 14 O O32 ALD . . . B 2 -7.569 25.108 -17.607 0.65 53.43 ? O32 ALD 301 A 1 HETATM 15 C C30 ALD . . . B 2 -8.603 24.139 -20.025 0.65 48.88 ? C30 ALD 301 A 1 HETATM 16 C C31 ALD . . . B 2 -9.729 23.541 -19.171 0.65 48.86 ? C31 ALD 301 A 1 HETATM 17 C C32 ALD . . . B 2 -10.858 24.526 -18.903 0.65 48.68 ? C32 ALD 301 A 1 HETATM 18 C C33 ALD . . . B 2 -10.263 22.27 -19.827 0.65 46.69 ? C33 ALD 301 A 1 HETATM 19 N N13 ALD . . . B 2 -7.82 27.269 -18.176 0.65 50.97 ? N13 ALD 301 A 1 HETATM 20 C C14 ALD . . . B 2 -7.561 27.762 -16.822 0.65 50.88 ? C14 ALD 301 A 1 HETATM 21 C C15 ALD . . . B 2 -8.102 29.175 -16.629 0.65 47.51 ? C15 ALD 301 A 1 HETATM 22 O O34 ALD . . . B 2 -8.577 29.805 -17.581 0.65 49.34 ? O34 ALD 301 A 1 HETATM 23 C C24 ALD . . . B 2 -6.051 27.779 -16.551 0.65 51.4 ? C24 ALD 301 A 1 HETATM 24 C C25 ALD . . . B 2 -5.406 26.686 -15.696 0.65 49.41 ? C25 ALD 301 A 1 HETATM 25 C C26 ALD . . . B 2 -4.704 25.676 -16.582 0.65 48.46 ? C26 ALD 301 A 1 HETATM 26 C C27 ALD . . . B 2 -6.404 26.008 -14.764 0.65 51.41 ? C27 ALD 301 A 1 HETATM 27 N N16 ALD . . . B 2 -7.988 29.68 -15.402 0.65 40.19 ? N16 ALD 301 A 1 HETATM 28 C C17 ALD . . . B 2 -8.426 31.037 -15.086 0.65 36.28 ? C17 ALD 301 A 1 HETATM 29 C C22 ALD . . . B 2 -7.46 32.04 -15.756 0.65 28.42 ? C22 ALD 301 A 1 HETATM 30 C C18 ALD . . . B 2 -8.528 31.212 -13.563 0.65 36.91 ? C18 ALD 301 A 1 HETATM 31 C C19 ALD . . . B 2 -9.371 30.185 -12.796 0.65 36.8 ? C19 ALD 301 A 1 HETATM 32 C C20 ALD . . . B 2 -10.135 30.847 -11.661 0.65 37.13 ? C20 ALD 301 A 1 HETATM 33 C C21 ALD . . . B 2 -8.512 29.036 -12.272 0.65 35.19 ? C21 ALD 301 A 1 HETATM 34 O O33 ALD . . . B 2 -6.115 31.609 -15.558 0.65 35.13 ? O33 ALD 301 A 1 # _model_server_stats.io_time_ms 126 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #