data_1BQS # _model_server_result.job_id RxitB6q4bsOO1Up8T25lGQ _model_server_result.datetime_utc '2024-12-23 06:37:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bqs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 1BQS # _exptl.entry_id 1BQS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BQS _cell.length_a 65.76 _cell.length_b 101.1 _cell.length_c 70.04 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BQS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 25 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 29 A CYS 29 1_555 A SG CYS 76 A CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 112 A CYS 112 1_555 A SG CYS 182 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 61 A ASN 61 1_555 B C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1BQS _atom_sites.fract_transf_matrix[1][1] 0.015207 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014278 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 401 401 NAG NAG . C 3 HOH A 1 251 251 HOH HOH . C 3 HOH A 2 252 252 HOH HOH . C 3 HOH A 3 253 253 HOH HOH . C 3 HOH A 4 254 254 HOH HOH . C 3 HOH A 5 255 255 HOH HOH . C 3 HOH A 6 256 256 HOH HOH . C 3 HOH A 7 257 257 HOH HOH . C 3 HOH A 8 258 258 HOH HOH . C 3 HOH A 9 259 259 HOH HOH . C 3 HOH A 10 260 260 HOH HOH . C 3 HOH A 11 261 261 HOH HOH . C 3 HOH A 12 262 262 HOH HOH . C 3 HOH A 13 263 263 HOH HOH . C 3 HOH A 14 264 264 HOH HOH . C 3 HOH A 15 265 265 HOH HOH . C 3 HOH A 16 266 266 HOH HOH . C 3 HOH A 17 267 267 HOH HOH . C 3 HOH A 18 268 268 HOH HOH . C 3 HOH A 19 269 269 HOH HOH . C 3 HOH A 20 270 270 HOH HOH . C 3 HOH A 21 271 271 HOH HOH . C 3 HOH A 22 272 272 HOH HOH . C 3 HOH A 23 273 273 HOH HOH . C 3 HOH A 24 274 274 HOH HOH . C 3 HOH A 25 275 275 HOH HOH . C 3 HOH A 26 276 276 HOH HOH . C 3 HOH A 27 277 277 HOH HOH . C 3 HOH A 28 278 278 HOH HOH . C 3 HOH A 29 279 279 HOH HOH . C 3 HOH A 30 280 280 HOH HOH . C 3 HOH A 31 281 281 HOH HOH . C 3 HOH A 32 282 282 HOH HOH . C 3 HOH A 33 283 283 HOH HOH . C 3 HOH A 34 284 284 HOH HOH . C 3 HOH A 35 285 285 HOH HOH . C 3 HOH A 36 286 286 HOH HOH . C 3 HOH A 37 287 287 HOH HOH . C 3 HOH A 38 288 288 HOH HOH . C 3 HOH A 39 289 289 HOH HOH . C 3 HOH A 40 290 290 HOH HOH . C 3 HOH A 41 291 291 HOH HOH . C 3 HOH A 42 292 292 HOH HOH . C 3 HOH A 43 293 293 HOH HOH . C 3 HOH A 44 294 294 HOH HOH . C 3 HOH A 45 295 295 HOH HOH . C 3 HOH A 46 296 296 HOH HOH . C 3 HOH A 47 297 297 HOH HOH . C 3 HOH A 48 298 298 HOH HOH . C 3 HOH A 49 299 299 HOH HOH . C 3 HOH A 50 300 300 HOH HOH . C 3 HOH A 51 301 301 HOH HOH . C 3 HOH A 52 302 302 HOH HOH . C 3 HOH A 53 303 303 HOH HOH . C 3 HOH A 54 304 304 HOH HOH . C 3 HOH A 55 305 305 HOH HOH . C 3 HOH A 56 306 306 HOH HOH . C 3 HOH A 57 307 307 HOH HOH . C 3 HOH A 58 308 308 HOH HOH . C 3 HOH A 59 309 309 HOH HOH . C 3 HOH A 60 310 310 HOH HOH . C 3 HOH A 61 311 311 HOH HOH . C 3 HOH A 62 312 312 HOH HOH . C 3 HOH A 63 313 313 HOH HOH . C 3 HOH A 64 314 314 HOH HOH . C 3 HOH A 65 315 315 HOH HOH . C 3 HOH A 66 316 316 HOH HOH . C 3 HOH A 67 317 317 HOH HOH . C 3 HOH A 68 318 318 HOH HOH . C 3 HOH A 69 319 319 HOH HOH . C 3 HOH A 70 320 320 HOH HOH . C 3 HOH A 71 321 321 HOH HOH . C 3 HOH A 72 322 322 HOH HOH . C 3 HOH A 73 323 323 HOH HOH . C 3 HOH A 74 324 324 HOH HOH . C 3 HOH A 75 325 325 HOH HOH . C 3 HOH A 76 326 326 HOH HOH . C 3 HOH A 77 327 327 HOH HOH . C 3 HOH A 78 328 328 HOH HOH . C 3 HOH A 79 329 329 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . B 2 37.133 50.937 22.431 1 82.53 ? C1 NAG 401 A 1 HETATM 2 C C2 NAG . . . B 2 37.49 50.245 21.101 1 87.29 ? C2 NAG 401 A 1 HETATM 3 C C3 NAG . . . B 2 37.046 51.088 19.911 1 88.27 ? C3 NAG 401 A 1 HETATM 4 C C4 NAG . . . B 2 35.565 51.408 20.049 1 91.37 ? C4 NAG 401 A 1 HETATM 5 C C5 NAG . . . B 2 35.283 52.086 21.412 1 93.63 ? C5 NAG 401 A 1 HETATM 6 C C6 NAG . . . B 2 33.802 52.36 21.665 1 96.39 ? C6 NAG 401 A 1 HETATM 7 C C7 NAG . . . B 2 39.286 48.655 21.033 1 93.87 ? C7 NAG 401 A 1 HETATM 8 C C8 NAG . . . B 2 40.781 48.392 20.963 1 92.75 ? C8 NAG 401 A 1 HETATM 9 N N2 NAG . . . B 2 38.903 49.93 21.028 1 91.78 ? N2 NAG 401 A 1 HETATM 10 O O3 NAG . . . B 2 37.261 50.377 18.704 1 85.99 ? O3 NAG 401 A 1 HETATM 11 O O4 NAG . . . B 2 35.184 52.266 18.984 1 92.41 ? O4 NAG 401 A 1 HETATM 12 O O5 NAG . . . B 2 35.737 51.249 22.5 1 89.44 ? O5 NAG 401 A 1 HETATM 13 O O6 NAG . . . B 2 33.221 51.364 22.502 1 99.48 ? O6 NAG 401 A 1 HETATM 14 O O7 NAG . . . B 2 38.484 47.717 21.083 1 96.4 ? O7 NAG 401 A 1 # _model_server_stats.io_time_ms 97 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #