data_1BR4 # _model_server_result.job_id tNPiHKoPLJg3kYC7W0vMaQ _model_server_result.datetime_utc '2024-11-22 10:36:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1br4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":999}' # _entry.id 1BR4 # _exptl.entry_id 1BR4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 66.007 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BERYLLIUM TRIFLUORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 111.21 _cell.angle_beta 106.1 _cell.angle_gamma 92.58 _cell.entry_id 1BR4 _cell.length_a 95.32 _cell.length_b 144.66 _cell.length_c 147.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BR4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,U 1 1 C,D,L,M,N,V 2 1 E,F,O,P,Q,W 3 1 G,H,R,S,T,X 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 N N N ? 5 Q N N ? 5 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 183 A THR 184 1_555 I MG MG . A MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OG SER 245 A SER 246 1_555 I MG MG . A MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? metalc ? metalc3 U O HOH . A HOH 995 1_555 I MG MG . A MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc4 I MG MG . A MG 997 1_555 J O2B ADP . A ADP 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc5 I MG MG . A MG 997 1_555 K F3 BEF . A BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc6 J O3B ADP . A ADP 998 1_555 K BE BEF . A BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.568 ? metalc ? metalc7 C OG1 THR 183 C THR 184 1_555 L MG MG . C MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc8 C OG SER 245 C SER 246 1_555 L MG MG . C MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? metalc ? metalc9 V O HOH . C HOH 995 1_555 L MG MG . C MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc10 L MG MG . C MG 997 1_555 M O2B ADP . C ADP 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc11 L MG MG . C MG 997 1_555 N F3 BEF . C BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc12 M O3B ADP . C ADP 998 1_555 N BE BEF . C BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.568 ? metalc ? metalc13 E OG1 THR 183 E THR 184 1_555 O MG MG . E MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc14 E OG SER 245 E SER 246 1_555 O MG MG . E MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? metalc ? metalc15 W O HOH . E HOH 995 1_555 O MG MG . E MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc16 O MG MG . E MG 997 1_555 P O2B ADP . E ADP 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc17 O MG MG . E MG 997 1_555 Q F3 BEF . E BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc18 P O3B ADP . E ADP 998 1_555 Q BE BEF . E BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.569 ? metalc ? metalc19 G OG1 THR 183 G THR 184 1_555 R MG MG . G MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc20 G OG SER 245 G SER 246 1_555 R MG MG . G MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? metalc ? metalc21 X O HOH . G HOH 995 1_555 R MG MG . G MG 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc22 R MG MG . G MG 997 1_555 S O2B ADP . G ADP 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc23 R MG MG . G MG 997 1_555 T F3 BEF . G BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc24 S O3B ADP . G ADP 998 1_555 T BE BEF . G BEF 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.568 ? # _chem_comp.formula 'Be F3 -1' _chem_comp.formula_weight 66.007 _chem_comp.id BEF _chem_comp.mon_nstd_flag . _chem_comp.name 'BERYLLIUM TRIFLUORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BE F1 BEF sing 114 n n BE F2 BEF sing 115 n n BE F3 BEF sing 116 n n # _atom_sites.entry_id 1BR4 _atom_sites.fract_transf_matrix[1][1] 0.010491 _atom_sites.fract_transf_matrix[1][2] 0.000473 _atom_sites.fract_transf_matrix[1][3] 0.003489 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00692 _atom_sites.fract_transf_matrix[2][3] 0.00293 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 MG A 1 997 997 MG MG . J 4 ADP A 1 998 998 ADP ADP . K 5 BEF A 1 999 999 BEF BEF . L 3 MG C 1 997 997 MG MG . M 4 ADP C 1 998 998 ADP ADP . N 5 BEF C 1 999 999 BEF BEF . O 3 MG E 1 997 997 MG MG . P 4 ADP E 1 998 998 ADP ADP . Q 5 BEF E 1 999 999 BEF BEF . R 3 MG G 1 997 997 MG MG . S 4 ADP G 1 998 998 ADP ADP . T 5 BEF G 1 999 999 BEF BEF . U 6 HOH A 1 995 995 HOH HOH . U 6 HOH A 2 996 996 HOH HOH . V 6 HOH C 1 995 995 HOH HOH . V 6 HOH C 2 996 996 HOH HOH . W 6 HOH E 1 995 995 HOH HOH . W 6 HOH E 2 996 996 HOH HOH . X 6 HOH G 1 995 995 HOH HOH . X 6 HOH G 2 996 996 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BE BE BEF . . . N 5 71.166 41.052 52.411 1 25 ? BE BEF 999 C 1 HETATM 2 F F1 BEF . . . N 5 72.396 41.328 53.35 1 25 ? F1 BEF 999 C 1 HETATM 3 F F2 BEF . . . N 5 70.372 42.328 52.154 1 25 ? F2 BEF 999 C 1 HETATM 4 F F3 BEF . . . N 5 70.289 39.979 53.081 1 25 ? F3 BEF 999 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 79 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 4 #