data_1BR5 # _model_server_result.job_id PViqdZ66XlOwY64GB_RLKg _model_server_result.datetime_utc '2024-10-24 04:26:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1br5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1BR5 # _exptl.entry_id 1BR5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 253.215 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NEOPTERIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.83 _cell.angle_gamma 90 _cell.entry_id 1BR5 _cell.length_a 42.81 _cell.length_b 68.79 _cell.length_c 50.09 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BR5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H11 N5 O4' _chem_comp.formula_weight 253.215 _chem_comp.id NEO _chem_comp.mon_nstd_flag . _chem_comp.name NEOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C1 NEO sing 237 n y N2 C3 NEO sing 238 n y N2 HN2 NEO sing 239 n n C1 C10 NEO sing 240 n y C1 O11 NEO doub 241 n n C10 N9 NEO sing 242 n y C10 C5 NEO doub 243 n y N9 C8 NEO doub 244 n y C8 C7 NEO sing 245 n y C8 C16 NEO sing 246 n n C7 N6 NEO doub 247 n y C7 H7 NEO sing 248 n n N6 C5 NEO sing 249 n y C5 N4 NEO sing 250 n y N4 C3 NEO doub 251 n y C3 N13 NEO sing 252 n n N13 H131 NEO sing 253 n n N13 H132 NEO sing 254 n n C16 O21 NEO sing 255 n n C16 C26 NEO sing 256 n n C16 H16 NEO sing 257 n n O21 H21 NEO sing 258 n n C26 O22 NEO sing 259 n n C26 C28 NEO sing 260 n n C26 H26 NEO sing 261 n n O22 H22 NEO sing 262 n n C28 O24 NEO sing 263 n n C28 H281 NEO sing 264 n n C28 H282 NEO sing 265 n n O24 H24 NEO sing 266 n n # _atom_sites.entry_id 1BR5 _atom_sites.fract_transf_matrix[1][1] 0.023359 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009834 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014537 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NEO A 1 500 500 NEO NEO . C 3 HOH A 1 268 268 HOH HOH . C 3 HOH A 2 269 269 HOH HOH . C 3 HOH A 3 271 271 HOH HOH . C 3 HOH A 4 272 272 HOH HOH . C 3 HOH A 5 274 274 HOH HOH . C 3 HOH A 6 275 275 HOH HOH . C 3 HOH A 7 276 276 HOH HOH . C 3 HOH A 8 277 277 HOH HOH . C 3 HOH A 9 280 280 HOH HOH . C 3 HOH A 10 281 281 HOH HOH . C 3 HOH A 11 282 282 HOH HOH . C 3 HOH A 12 283 283 HOH HOH . C 3 HOH A 13 286 286 HOH HOH . C 3 HOH A 14 287 287 HOH HOH . C 3 HOH A 15 288 288 HOH HOH . C 3 HOH A 16 289 289 HOH HOH . C 3 HOH A 17 290 290 HOH HOH . C 3 HOH A 18 292 292 HOH HOH . C 3 HOH A 19 293 293 HOH HOH . C 3 HOH A 20 294 294 HOH HOH . C 3 HOH A 21 295 295 HOH HOH . C 3 HOH A 22 296 296 HOH HOH . C 3 HOH A 23 298 298 HOH HOH . C 3 HOH A 24 299 299 HOH HOH . C 3 HOH A 25 300 300 HOH HOH . C 3 HOH A 26 301 301 HOH HOH . C 3 HOH A 27 302 302 HOH HOH . C 3 HOH A 28 303 303 HOH HOH . C 3 HOH A 29 304 304 HOH HOH . C 3 HOH A 30 305 305 HOH HOH . C 3 HOH A 31 306 306 HOH HOH . C 3 HOH A 32 310 310 HOH HOH . C 3 HOH A 33 311 311 HOH HOH . C 3 HOH A 34 312 312 HOH HOH . C 3 HOH A 35 313 313 HOH HOH . C 3 HOH A 36 316 316 HOH HOH . C 3 HOH A 37 317 317 HOH HOH . C 3 HOH A 38 318 318 HOH HOH . C 3 HOH A 39 320 320 HOH HOH . C 3 HOH A 40 321 321 HOH HOH . C 3 HOH A 41 322 322 HOH HOH . C 3 HOH A 42 323 323 HOH HOH . C 3 HOH A 43 324 324 HOH HOH . C 3 HOH A 44 332 332 HOH HOH . C 3 HOH A 45 334 334 HOH HOH . C 3 HOH A 46 335 335 HOH HOH . C 3 HOH A 47 336 336 HOH HOH . C 3 HOH A 48 337 337 HOH HOH . C 3 HOH A 49 338 338 HOH HOH . C 3 HOH A 50 339 339 HOH HOH . C 3 HOH A 51 340 340 HOH HOH . C 3 HOH A 52 341 341 HOH HOH . C 3 HOH A 53 342 342 HOH HOH . C 3 HOH A 54 343 343 HOH HOH . C 3 HOH A 55 344 344 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 NEO . . . B 2 1.553 0.2 8.716 1 12.04 ? N2 NEO 500 A 1 HETATM 2 C C1 NEO . . . B 2 0.491 0.673 8.014 1 9.68 ? C1 NEO 500 A 1 HETATM 3 C C10 NEO . . . B 2 0.688 1.364 6.803 1 11.05 ? C10 NEO 500 A 1 HETATM 4 N N9 NEO . . . B 2 -0.293 1.864 5.993 1 14.19 ? N9 NEO 500 A 1 HETATM 5 C C8 NEO . . . B 2 0.018 2.566 4.847 1 16.77 ? C8 NEO 500 A 1 HETATM 6 C C7 NEO . . . B 2 1.397 2.751 4.525 1 14.3 ? C7 NEO 500 A 1 HETATM 7 N N6 NEO . . . B 2 2.365 2.224 5.316 1 11.85 ? N6 NEO 500 A 1 HETATM 8 C C5 NEO . . . B 2 2.046 1.541 6.43 1 8.57 ? C5 NEO 500 A 1 HETATM 9 N N4 NEO . . . B 2 3.047 1.066 7.159 1 7.05 ? N4 NEO 500 A 1 HETATM 10 C C3 NEO . . . B 2 2.827 0.395 8.291 1 7.88 ? C3 NEO 500 A 1 HETATM 11 N N13 NEO . . . B 2 3.867 0.248 9.105 1 6.88 ? N13 NEO 500 A 1 HETATM 12 C C16 NEO . . . B 2 -1.143 3.122 3.979 1 15.84 ? C16 NEO 500 A 1 HETATM 13 O O21 NEO . . . B 2 -2.401 2.633 4.435 1 21.06 ? O21 NEO 500 A 1 HETATM 14 C C26 NEO . . . B 2 -1.283 4.645 3.828 1 17.72 ? C26 NEO 500 A 1 HETATM 15 O O22 NEO . . . B 2 -2.58 5.078 4.314 1 15.5 ? O22 NEO 500 A 1 HETATM 16 C C28 NEO . . . B 2 -1.077 5.164 2.355 1 18.98 ? C28 NEO 500 A 1 HETATM 17 O O24 NEO . . . B 2 -0.052 4.446 1.622 1 19.31 ? O24 NEO 500 A 1 HETATM 18 O O11 NEO . . . B 2 -0.755 0.609 8.608 1 10.15 ? O11 NEO 500 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #