data_1BRR # _model_server_result.job_id 5AgDi3B9pet5G46bssxMdA _model_server_result.datetime_utc '2024-11-02 19:44:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1brr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":1001}' # _entry.id 1BRR # _exptl.entry_id 1BRR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.547 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,7,11,15-TETRAMETHYL-HEXADECAN-1-OL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.94 _cell.angle_gamma 90 _cell.entry_id 1BRR _cell.length_a 120.52 _cell.length_b 105.96 _cell.length_c 80.19 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BRR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 T N N ? 4 U N N ? 4 V N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 MAN GLC C1 O1 . O2 HO2 . sing 2 ? 2 3 2 SGA MAN C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n D GLC 1 D 1 GLC S 24 GLC 2 n D MAN 2 D 2 MAN S 25 MAN 2 n D SGA 3 D 3 SGA S 26 SGA 2 n E GLC 1 E 1 GLC S 34 GLC 2 n E MAN 2 E 2 MAN S 35 MAN 2 n E SGA 3 E 3 SGA S 36 SGA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C PCA 1 C PCA 1 1_555 C N ALA 2 C ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 D O2 GLC . D GLC 1 1_555 D C1 MAN . D MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? covale ? covale3 D O6 MAN . D MAN 2 1_555 D C1 SGA . D SGA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 ? covale ? covale4 E O2 GLC . E GLC 1 1_555 E C1 MAN . E MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? covale ? covale5 E O6 MAN . E MAN 2 1_555 E C1 SGA . E SGA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? # _chem_comp.formula 'C20 H42 O' _chem_comp.formula_weight 298.547 _chem_comp.id ARC _chem_comp.mon_nstd_flag . _chem_comp.name 3,7,11,15-TETRAMETHYL-HEXADECAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 ARC sing 13 n n O1 HO1 ARC sing 14 n n C1 C2 ARC sing 15 n n C1 H11 ARC sing 16 n n C1 H12 ARC sing 17 n n C2 C3 ARC sing 18 n n C2 H21 ARC sing 19 n n C2 H22 ARC sing 20 n n C3 C4 ARC sing 21 n n C3 C5 ARC sing 22 n n C3 H3 ARC sing 23 n n C4 H41 ARC sing 24 n n C4 H42 ARC sing 25 n n C4 H43 ARC sing 26 n n C5 C6 ARC sing 27 n n C5 H51 ARC sing 28 n n C5 H52 ARC sing 29 n n C6 C7 ARC sing 30 n n C6 H61 ARC sing 31 n n C6 H62 ARC sing 32 n n C7 C8 ARC sing 33 n n C7 H71 ARC sing 34 n n C7 H72 ARC sing 35 n n C8 C9 ARC sing 36 n n C8 C10 ARC sing 37 n n C8 H8 ARC sing 38 n n C9 H91 ARC sing 39 n n C9 H92 ARC sing 40 n n C9 H93 ARC sing 41 n n C10 C11 ARC sing 42 n n C10 H101 ARC sing 43 n n C10 H102 ARC sing 44 n n C11 C12 ARC sing 45 n n C11 H111 ARC sing 46 n n C11 H112 ARC sing 47 n n C12 C13 ARC sing 48 n n C12 H121 ARC sing 49 n n C12 H122 ARC sing 50 n n C13 C14 ARC sing 51 n n C13 C15 ARC sing 52 n n C13 H13 ARC sing 53 n n C14 H141 ARC sing 54 n n C14 H142 ARC sing 55 n n C14 H143 ARC sing 56 n n C15 C16 ARC sing 57 n n C15 H151 ARC sing 58 n n C15 H152 ARC sing 59 n n C16 C17 ARC sing 60 n n C16 H161 ARC sing 61 n n C16 H162 ARC sing 62 n n C17 C18 ARC sing 63 n n C17 H171 ARC sing 64 n n C17 H172 ARC sing 65 n n C18 C19 ARC sing 66 n n C18 C20 ARC sing 67 n n C18 H18 ARC sing 68 n n C19 H191 ARC sing 69 n n C19 H192 ARC sing 70 n n C19 H193 ARC sing 71 n n C20 H201 ARC sing 72 n n C20 H202 ARC sing 73 n n C20 H203 ARC sing 74 n n # _atom_sites.entry_id 1BRR _atom_sites.fract_transf_matrix[1][1] 0.008297 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000717 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009437 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012517 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 RET A 1 999 999 RET RET . G 4 ARC A 1 1000 8 ARC ARC . H 4 ARC A 1 1001 22 ARC ARC . I 4 ARC A 1 1002 31 ARC ARC . J 5 GOL A 1 1003 23 GOL GOL . K 6 BGC B 1 251 4 BGC BGC . L 3 RET B 1 999 999 RET RET . M 4 ARC B 1 1000 9 ARC ARC . N 4 ARC B 1 1001 11 ARC ARC . O 4 ARC B 1 1002 12 ARC ARC . P 4 ARC B 1 1003 21 ARC ARC . Q 7 OCT B 1 1004 5 OCT OCT . R 5 GOL B 1 1005 13 GOL GOL . S 3 RET C 1 999 999 RET RET . T 4 ARC C 1 1000 6 ARC ARC . U 4 ARC C 1 1001 7 ARC ARC . V 4 ARC C 1 1002 32 ARC ARC . W 5 GOL C 1 1003 33 GOL GOL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 ARC . . . U 4 46.036 2.366 9.379 1 96.5 ? O1 ARC 1001 C 1 HETATM 2 C C1 ARC . . . U 4 46.204 1.639 8.179 1 96.86 ? C1 ARC 1001 C 1 HETATM 3 C C2 ARC . . . U 4 46.437 2.578 7.026 1 97.36 ? C2 ARC 1001 C 1 HETATM 4 C C3 ARC . . . U 4 47.727 3.396 7.126 1 98.22 ? C3 ARC 1001 C 1 HETATM 5 C C4 ARC . . . U 4 48.963 2.481 7.135 1 98.32 ? C4 ARC 1001 C 1 HETATM 6 C C5 ARC . . . U 4 47.784 4.365 5.94 1 97.56 ? C5 ARC 1001 C 1 HETATM 7 C C6 ARC . . . U 4 46.678 5.396 5.951 1 96.93 ? C6 ARC 1001 C 1 HETATM 8 C C7 ARC . . . U 4 46.027 5.582 4.582 1 96.72 ? C7 ARC 1001 C 1 HETATM 9 C C8 ARC . . . U 4 45.055 4.467 4.151 1 96.25 ? C8 ARC 1001 C 1 HETATM 10 C C9 ARC . . . U 4 45.793 3.16 3.863 1 96.69 ? C9 ARC 1001 C 1 HETATM 11 C C10 ARC . . . U 4 43.977 4.23 5.229 1 94.44 ? C10 ARC 1001 C 1 HETATM 12 C C11 ARC . . . U 4 42.827 3.291 4.806 1 92.84 ? C11 ARC 1001 C 1 HETATM 13 C C12 ARC . . . U 4 41.91 3.928 3.757 1 91.74 ? C12 ARC 1001 C 1 HETATM 14 C C13 ARC . . . U 4 41.058 2.937 2.952 1 90.5 ? C13 ARC 1001 C 1 HETATM 15 C C14 ARC . . . U 4 39.755 2.661 3.683 1 89.57 ? C14 ARC 1001 C 1 HETATM 16 C C15 ARC . . . U 4 40.757 3.504 1.555 1 89.52 ? C15 ARC 1001 C 1 HETATM 17 C C16 ARC . . . U 4 40.097 2.524 0.583 1 88.37 ? C16 ARC 1001 C 1 HETATM 18 C C17 ARC . . . U 4 39.736 3.213 -0.732 1 87.35 ? C17 ARC 1001 C 1 HETATM 19 C C18 ARC . . . U 4 39.306 2.274 -1.867 1 86.83 ? C18 ARC 1001 C 1 HETATM 20 C C19 ARC . . . U 4 38.507 3.026 -2.936 1 85.96 ? C19 ARC 1001 C 1 HETATM 21 C C20 ARC . . . U 4 40.538 1.645 -2.505 1 85.97 ? C20 ARC 1001 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 21 #