data_1BRU
#
_model_server_result.job_id            Z6cY5RSca-O0djWAYhQJ8A 
_model_server_result.datetime_utc      '2024-11-07 10:40:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1bru 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    1BRU 
#
_exptl.entry_id    1BRU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              168.233 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1BRU 
_cell.length_a            41.59 
_cell.length_b            46.45 
_cell.length_c            128.23 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1BRU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 30 P CYS 42 1_555 A SG CYS 46 P CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? 
disulf ? disulf2 A SG CYS 127 P CYS 136 1_555 A SG CYS 194 P CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf3 A SG CYS 158 P CYS 168 1_555 A SG CYS 174 P CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 A SG CYS 184 P CYS 191 1_555 A SG CYS 215 P CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
covale ? covale1 B C30 1NB . P 1NB 1 1_555 A OG SER 188 P SER 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.241 ? 
#
_chem_comp.formula           'C10 H16 O2' 
_chem_comp.formula_weight    168.233 
_chem_comp.id                1NB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GR143783 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C7 C8 1NB sing 1 n n 
C7 C27 1NB sing 2 n n 
C7 C30 1NB sing 3 n n 
C7 H7 1NB sing 4 n n 
C8 C9 1NB sing 5 n n 
C8 C29 1NB sing 6 n n 
C8 H8 1NB sing 7 n n 
C9 C26 1NB sing 8 n n 
C9 H91 1NB sing 9 n n 
C9 H92 1NB sing 10 n n 
C17 C27 1NB sing 11 n n 
C17 C19 1NB doub 12 n n 
C17 H17 1NB sing 13 n n 
O5 C30 1NB doub 14 n n 
O4 C29 1NB sing 15 n n 
O4 HO4 1NB sing 16 n n 
C26 C28 1NB sing 17 n n 
C26 H261 1NB sing 18 n n 
C26 H262 1NB sing 19 n n 
C29 C28 1NB sing 20 n n 
C29 H29 1NB sing 21 n n 
C27 H271 1NB sing 22 n n 
C27 H272 1NB sing 23 n n 
C28 H281 1NB sing 24 n n 
C28 H282 1NB sing 25 n n 
C19 H191 1NB sing 26 n n 
C19 H192 1NB sing 27 n n 
C30 H30 1NB sing 28 n n 
#
_atom_sites.entry_id                     1BRU 
_atom_sites.fract_transf_matrix[1][1]    0.024044 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021529 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007798 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1NB P 1 1 1 1NB 1NB . 
C 3 HOH P 1 301 301 HOH HOH . 
C 3 HOH P 2 302 302 HOH HOH . 
C 3 HOH P 3 303 303 HOH HOH . 
C 3 HOH P 4 304 304 HOH HOH . 
C 3 HOH P 5 305 305 HOH HOH . 
C 3 HOH P 6 306 306 HOH HOH . 
C 3 HOH P 7 307 307 HOH HOH . 
C 3 HOH P 8 308 308 HOH HOH . 
C 3 HOH P 9 309 309 HOH HOH . 
C 3 HOH P 10 310 310 HOH HOH . 
C 3 HOH P 11 311 311 HOH HOH . 
C 3 HOH P 12 312 312 HOH HOH . 
C 3 HOH P 13 313 313 HOH HOH . 
C 3 HOH P 14 314 314 HOH HOH . 
C 3 HOH P 15 315 315 HOH HOH . 
C 3 HOH P 16 316 316 HOH HOH . 
C 3 HOH P 17 317 317 HOH HOH . 
C 3 HOH P 18 318 318 HOH HOH . 
C 3 HOH P 19 319 319 HOH HOH . 
C 3 HOH P 20 320 320 HOH HOH . 
C 3 HOH P 21 321 321 HOH HOH . 
C 3 HOH P 22 322 322 HOH HOH . 
C 3 HOH P 23 323 323 HOH HOH . 
C 3 HOH P 24 324 324 HOH HOH . 
C 3 HOH P 25 325 325 HOH HOH . 
C 3 HOH P 26 326 326 HOH HOH . 
C 3 HOH P 27 327 327 HOH HOH . 
C 3 HOH P 28 328 328 HOH HOH . 
C 3 HOH P 29 329 329 HOH HOH . 
C 3 HOH P 30 330 330 HOH HOH . 
C 3 HOH P 31 331 331 HOH HOH . 
C 3 HOH P 32 332 332 HOH HOH . 
C 3 HOH P 33 333 333 HOH HOH . 
C 3 HOH P 34 334 334 HOH HOH . 
C 3 HOH P 35 335 335 HOH HOH . 
C 3 HOH P 36 336 336 HOH HOH . 
C 3 HOH P 37 337 337 HOH HOH . 
C 3 HOH P 38 338 338 HOH HOH . 
C 3 HOH P 39 339 339 HOH HOH . 
C 3 HOH P 40 340 340 HOH HOH . 
C 3 HOH P 41 341 341 HOH HOH . 
C 3 HOH P 42 342 342 HOH HOH . 
C 3 HOH P 43 343 343 HOH HOH . 
C 3 HOH P 44 344 344 HOH HOH . 
C 3 HOH P 45 345 345 HOH HOH . 
C 3 HOH P 46 346 346 HOH HOH . 
C 3 HOH P 47 347 347 HOH HOH . 
C 3 HOH P 48 348 348 HOH HOH . 
C 3 HOH P 49 349 349 HOH HOH . 
C 3 HOH P 50 351 351 HOH HOH . 
C 3 HOH P 51 352 352 HOH HOH . 
C 3 HOH P 52 353 353 HOH HOH . 
C 3 HOH P 53 354 354 HOH HOH . 
C 3 HOH P 54 355 355 HOH HOH . 
C 3 HOH P 55 356 356 HOH HOH . 
C 3 HOH P 56 357 357 HOH HOH . 
C 3 HOH P 57 358 358 HOH HOH . 
C 3 HOH P 58 359 359 HOH HOH . 
C 3 HOH P 59 360 360 HOH HOH . 
C 3 HOH P 60 361 361 HOH HOH . 
C 3 HOH P 61 362 362 HOH HOH . 
C 3 HOH P 62 363 363 HOH HOH . 
C 3 HOH P 63 364 364 HOH HOH . 
C 3 HOH P 64 365 365 HOH HOH . 
C 3 HOH P 65 366 366 HOH HOH . 
C 3 HOH P 66 367 367 HOH HOH . 
C 3 HOH P 67 368 368 HOH HOH . 
C 3 HOH P 68 369 369 HOH HOH . 
C 3 HOH P 69 370 370 HOH HOH . 
C 3 HOH P 70 371 371 HOH HOH . 
C 3 HOH P 71 372 372 HOH HOH . 
C 3 HOH P 72 373 373 HOH HOH . 
C 3 HOH P 73 374 374 HOH HOH . 
C 3 HOH P 74 375 375 HOH HOH . 
C 3 HOH P 75 376 376 HOH HOH . 
C 3 HOH P 76 377 377 HOH HOH . 
C 3 HOH P 77 378 378 HOH HOH . 
C 3 HOH P 78 379 379 HOH HOH . 
C 3 HOH P 79 380 380 HOH HOH . 
C 3 HOH P 80 382 382 HOH HOH . 
C 3 HOH P 81 383 383 HOH HOH . 
C 3 HOH P 82 384 384 HOH HOH . 
C 3 HOH P 83 385 385 HOH HOH . 
C 3 HOH P 84 386 386 HOH HOH . 
C 3 HOH P 85 387 387 HOH HOH . 
C 3 HOH P 86 388 388 HOH HOH . 
C 3 HOH P 87 389 389 HOH HOH . 
C 3 HOH P 88 390 390 HOH HOH . 
C 3 HOH P 89 391 391 HOH HOH . 
C 3 HOH P 90 392 392 HOH HOH . 
C 3 HOH P 91 393 393 HOH HOH . 
C 3 HOH P 92 394 394 HOH HOH . 
C 3 HOH P 93 395 395 HOH HOH . 
C 3 HOH P 94 396 396 HOH HOH . 
C 3 HOH P 95 397 397 HOH HOH . 
C 3 HOH P 96 398 398 HOH HOH . 
C 3 HOH P 97 399 399 HOH HOH . 
C 3 HOH P 98 400 400 HOH HOH . 
C 3 HOH P 99 401 401 HOH HOH . 
C 3 HOH P 100 402 402 HOH HOH . 
C 3 HOH P 101 403 403 HOH HOH . 
C 3 HOH P 102 404 404 HOH HOH . 
C 3 HOH P 103 405 405 HOH HOH . 
C 3 HOH P 104 406 406 HOH HOH . 
C 3 HOH P 105 407 407 HOH HOH . 
C 3 HOH P 106 408 408 HOH HOH . 
C 3 HOH P 107 409 409 HOH HOH . 
C 3 HOH P 108 411 411 HOH HOH . 
C 3 HOH P 109 412 412 HOH HOH . 
C 3 HOH P 110 413 413 HOH HOH . 
C 3 HOH P 111 415 415 HOH HOH . 
C 3 HOH P 112 416 416 HOH HOH . 
C 3 HOH P 113 417 417 HOH HOH . 
C 3 HOH P 114 418 418 HOH HOH . 
C 3 HOH P 115 419 419 HOH HOH . 
C 3 HOH P 116 420 420 HOH HOH . 
C 3 HOH P 117 422 422 HOH HOH . 
C 3 HOH P 118 423 423 HOH HOH . 
C 3 HOH P 119 424 424 HOH HOH . 
C 3 HOH P 120 425 425 HOH HOH . 
C 3 HOH P 121 426 426 HOH HOH . 
C 3 HOH P 122 427 427 HOH HOH . 
C 3 HOH P 123 428 428 HOH HOH . 
C 3 HOH P 124 429 429 HOH HOH . 
C 3 HOH P 125 430 430 HOH HOH . 
C 3 HOH P 126 432 432 HOH HOH . 
C 3 HOH P 127 433 433 HOH HOH . 
C 3 HOH P 128 434 434 HOH HOH . 
C 3 HOH P 129 435 435 HOH HOH . 
C 3 HOH P 130 436 436 HOH HOH . 
C 3 HOH P 131 437 437 HOH HOH . 
C 3 HOH P 132 438 438 HOH HOH . 
C 3 HOH P 133 439 439 HOH HOH . 
C 3 HOH P 134 440 440 HOH HOH . 
C 3 HOH P 135 441 441 HOH HOH . 
C 3 HOH P 136 442 442 HOH HOH . 
C 3 HOH P 137 443 443 HOH HOH . 
C 3 HOH P 138 445 445 HOH HOH . 
C 3 HOH P 139 446 446 HOH HOH . 
C 3 HOH P 140 447 447 HOH HOH . 
C 3 HOH P 141 448 448 HOH HOH . 
C 3 HOH P 142 449 449 HOH HOH . 
C 3 HOH P 143 451 451 HOH HOH . 
C 3 HOH P 144 452 452 HOH HOH . 
C 3 HOH P 145 453 453 HOH HOH . 
C 3 HOH P 146 454 454 HOH HOH . 
C 3 HOH P 147 455 455 HOH HOH . 
C 3 HOH P 148 456 456 HOH HOH . 
C 3 HOH P 149 457 457 HOH HOH . 
C 3 HOH P 150 458 458 HOH HOH . 
C 3 HOH P 151 459 459 HOH HOH . 
C 3 HOH P 152 460 460 HOH HOH . 
C 3 HOH P 153 462 462 HOH HOH . 
C 3 HOH P 154 463 463 HOH HOH . 
C 3 HOH P 155 464 464 HOH HOH . 
C 3 HOH P 156 465 465 HOH HOH . 
C 3 HOH P 157 466 466 HOH HOH . 
C 3 HOH P 158 467 467 HOH HOH . 
C 3 HOH P 159 471 471 HOH HOH . 
C 3 HOH P 160 472 472 HOH HOH . 
C 3 HOH P 161 473 473 HOH HOH . 
C 3 HOH P 162 474 474 HOH HOH . 
C 3 HOH P 163 475 475 HOH HOH . 
C 3 HOH P 164 476 476 HOH HOH . 
C 3 HOH P 165 477 477 HOH HOH . 
C 3 HOH P 166 478 478 HOH HOH . 
C 3 HOH P 167 479 479 HOH HOH . 
C 3 HOH P 168 480 480 HOH HOH . 
C 3 HOH P 169 482 482 HOH HOH . 
C 3 HOH P 170 483 483 HOH HOH . 
C 3 HOH P 171 484 484 HOH HOH . 
C 3 HOH P 172 485 485 HOH HOH . 
C 3 HOH P 173 486 486 HOH HOH . 
C 3 HOH P 174 487 487 HOH HOH . 
C 3 HOH P 175 488 488 HOH HOH . 
C 3 HOH P 176 489 489 HOH HOH . 
C 3 HOH P 177 490 490 HOH HOH . 
C 3 HOH P 178 491 491 HOH HOH . 
C 3 HOH P 179 492 492 HOH HOH . 
C 3 HOH P 180 493 493 HOH HOH . 
C 3 HOH P 181 494 494 HOH HOH . 
C 3 HOH P 182 495 495 HOH HOH . 
C 3 HOH P 183 496 496 HOH HOH . 
C 3 HOH P 184 499 499 HOH HOH . 
C 3 HOH P 185 500 500 HOH HOH . 
C 3 HOH P 186 501 501 HOH HOH . 
C 3 HOH P 187 502 502 HOH HOH . 
C 3 HOH P 188 503 503 HOH HOH . 
C 3 HOH P 189 504 504 HOH HOH . 
C 3 HOH P 190 505 505 HOH HOH . 
C 3 HOH P 191 506 506 HOH HOH . 
C 3 HOH P 192 507 507 HOH HOH . 
C 3 HOH P 193 508 508 HOH HOH . 
C 3 HOH P 194 509 509 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 1NB . . . B 2 23.543 47.997 16.605 0.83 32.18 ? C7 1NB 1 P 1 
HETATM 2 C C8 1NB . . . B 2 22.804 47.553 17.883 0.83 35.4 ? C8 1NB 1 P 1 
HETATM 3 C C9 1NB . . . B 2 21.308 47.386 17.676 0.83 35.84 ? C9 1NB 1 P 1 
HETATM 4 C C17 1NB . . . B 2 23.699 49.612 14.64 0.83 27.99 ? C17 1NB 1 P 1 
HETATM 5 O O5 1NB . . . B 2 25.738 47.595 15.941 0.83 29.38 ? O5 1NB 1 P 1 
HETATM 6 O O4 1NB . . . B 2 24.051 46.355 19.716 0.83 37.37 ? O4 1NB 1 P 1 
HETATM 7 C C26 1NB . . . B 2 20.9 46.436 18.805 0.83 37.92 ? C26 1NB 1 P 1 
HETATM 8 C C29 1NB . . . B 2 23.284 46.196 18.51 0.83 37.28 ? C29 1NB 1 P 1 
HETATM 9 C C27 1NB . . . B 2 23.089 49.332 16.008 0.83 30.38 ? C27 1NB 1 P 1 
HETATM 10 C C28 1NB . . . B 2 22.023 45.41 18.862 0.83 37.37 ? C28 1NB 1 P 1 
HETATM 11 C C19 1NB . . . B 2 22.971 50.048 13.6 0.83 25.32 ? C19 1NB 1 P 1 
HETATM 12 C C30 1NB . . . B 2 25.043 47.998 16.836 0.83 30.52 ? C30 1NB 1 P 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           12 
#