data_1BRW # _model_server_result.job_id rmPqG7enxlKKjyzMesdaVw _model_server_result.datetime_utc '2024-11-26 22:26:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1brw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":5001}' # _entry.id 1BRW # _exptl.entry_id 1BRW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.087 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description URACIL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.02 _cell.angle_gamma 90 _cell.entry_id 1BRW _cell.length_a 53.57 _cell.length_b 70.45 _cell.length_c 122.78 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BRW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 88 A GLY 88 1_555 D CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc2 A OG1 THR 90 A THR 90 1_555 D CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc3 A O LEU 243 A LEU 243 1_555 D CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc4 A O ALA 246 A ALA 246 1_555 D CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc5 A OE2 GLU 255 A GLU 255 1_555 D CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc6 B O GLY 88 B GLY 1088 1_555 G CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc7 B OG1 THR 90 B THR 1090 1_555 G CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc8 B O LEU 243 B LEU 1243 1_555 G CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc9 B O ALA 246 B ALA 1246 1_555 G CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc10 B OE1 GLU 255 B GLU 1255 1_555 G CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.847 ? # _chem_comp.formula 'C4 H4 N2 O2' _chem_comp.formula_weight 112.087 _chem_comp.id URA _chem_comp.mon_nstd_flag . _chem_comp.name URACIL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 URA sing 387 n n N1 C6 URA sing 388 n n N1 HN1 URA sing 389 n n C2 O2 URA doub 390 n n C2 N3 URA sing 391 n n N3 C4 URA sing 392 n n N3 HN3 URA sing 393 n n C4 O4 URA doub 394 n n C4 C5 URA sing 395 n n C5 C6 URA doub 396 n n C5 H5 URA sing 397 n n C6 H6 URA sing 398 n n # _atom_sites.entry_id 1BRW _atom_sites.fract_transf_matrix[1][1] 0.018667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00263 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014194 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 2001 2001 PO4 PO4 . D 3 CA A 1 3001 3001 CA CA . E 4 MES A 1 6002 6002 MES MES . F 2 PO4 B 1 2002 2002 PO4 PO4 . G 3 CA B 1 3002 3002 CA CA . H 5 URA B 1 5001 5001 URA URA . I 4 MES B 1 6001 6001 MES MES . J 6 HOH A 1 4001 4001 HOH HOH . J 6 HOH A 2 4002 4002 HOH HOH . J 6 HOH A 3 4003 4003 HOH HOH . J 6 HOH A 4 4009 4009 HOH HOH . J 6 HOH A 5 4010 4010 HOH HOH . J 6 HOH A 6 4011 4011 HOH HOH . J 6 HOH A 7 4012 4012 HOH HOH . J 6 HOH A 8 4013 4013 HOH HOH . J 6 HOH A 9 4014 4014 HOH HOH . J 6 HOH A 10 4015 4015 HOH HOH . J 6 HOH A 11 4016 4016 HOH HOH . J 6 HOH A 12 4017 4017 HOH HOH . J 6 HOH A 13 4020 4020 HOH HOH . J 6 HOH A 14 4021 4021 HOH HOH . J 6 HOH A 15 4022 4022 HOH HOH . J 6 HOH A 16 4023 4023 HOH HOH . J 6 HOH A 17 4024 4024 HOH HOH . J 6 HOH A 18 4025 4025 HOH HOH . J 6 HOH A 19 4026 4026 HOH HOH . J 6 HOH A 20 4033 4033 HOH HOH . J 6 HOH A 21 4037 4037 HOH HOH . J 6 HOH A 22 4038 4038 HOH HOH . J 6 HOH A 23 4039 4039 HOH HOH . J 6 HOH A 24 4040 4040 HOH HOH . J 6 HOH A 25 4041 4041 HOH HOH . J 6 HOH A 26 4042 4042 HOH HOH . J 6 HOH A 27 4043 4043 HOH HOH . J 6 HOH A 28 4044 4044 HOH HOH . J 6 HOH A 29 4045 4045 HOH HOH . J 6 HOH A 30 4046 4046 HOH HOH . J 6 HOH A 31 4047 4047 HOH HOH . J 6 HOH A 32 4048 4048 HOH HOH . J 6 HOH A 33 4049 4049 HOH HOH . J 6 HOH A 34 4050 4050 HOH HOH . J 6 HOH A 35 4051 4051 HOH HOH . J 6 HOH A 36 4052 4052 HOH HOH . J 6 HOH A 37 4053 4053 HOH HOH . J 6 HOH A 38 4054 4054 HOH HOH . J 6 HOH A 39 4055 4055 HOH HOH . J 6 HOH A 40 4059 4059 HOH HOH . J 6 HOH A 41 4060 4060 HOH HOH . J 6 HOH A 42 4062 4062 HOH HOH . J 6 HOH A 43 4069 4069 HOH HOH . J 6 HOH A 44 4071 4071 HOH HOH . J 6 HOH A 45 4072 4072 HOH HOH . J 6 HOH A 46 4073 4073 HOH HOH . J 6 HOH A 47 4074 4074 HOH HOH . J 6 HOH A 48 4075 4075 HOH HOH . J 6 HOH A 49 4076 4076 HOH HOH . J 6 HOH A 50 4077 4077 HOH HOH . J 6 HOH A 51 4078 4078 HOH HOH . J 6 HOH A 52 4079 4079 HOH HOH . J 6 HOH A 53 4080 4080 HOH HOH . J 6 HOH A 54 4081 4081 HOH HOH . J 6 HOH A 55 4082 4082 HOH HOH . J 6 HOH A 56 4083 4083 HOH HOH . J 6 HOH A 57 4084 4084 HOH HOH . J 6 HOH A 58 4085 4085 HOH HOH . J 6 HOH A 59 4087 4087 HOH HOH . J 6 HOH A 60 4088 4088 HOH HOH . J 6 HOH A 61 4096 4096 HOH HOH . J 6 HOH A 62 4097 4097 HOH HOH . J 6 HOH A 63 4101 4101 HOH HOH . J 6 HOH A 64 4102 4102 HOH HOH . J 6 HOH A 65 4103 4103 HOH HOH . J 6 HOH A 66 4104 4104 HOH HOH . J 6 HOH A 67 4105 4105 HOH HOH . J 6 HOH A 68 4107 4107 HOH HOH . K 6 HOH B 1 4004 4004 HOH HOH . K 6 HOH B 2 4005 4005 HOH HOH . K 6 HOH B 3 4006 4006 HOH HOH . K 6 HOH B 4 4007 4007 HOH HOH . K 6 HOH B 5 4008 4008 HOH HOH . K 6 HOH B 6 4018 4018 HOH HOH . K 6 HOH B 7 4019 4019 HOH HOH . K 6 HOH B 8 4027 4027 HOH HOH . K 6 HOH B 9 4028 4028 HOH HOH . K 6 HOH B 10 4029 4029 HOH HOH . K 6 HOH B 11 4030 4030 HOH HOH . K 6 HOH B 12 4031 4031 HOH HOH . K 6 HOH B 13 4032 4032 HOH HOH . K 6 HOH B 14 4034 4034 HOH HOH . K 6 HOH B 15 4035 4035 HOH HOH . K 6 HOH B 16 4036 4036 HOH HOH . K 6 HOH B 17 4056 4056 HOH HOH . K 6 HOH B 18 4057 4057 HOH HOH . K 6 HOH B 19 4058 4058 HOH HOH . K 6 HOH B 20 4061 4061 HOH HOH . K 6 HOH B 21 4063 4063 HOH HOH . K 6 HOH B 22 4064 4064 HOH HOH . K 6 HOH B 23 4065 4065 HOH HOH . K 6 HOH B 24 4066 4066 HOH HOH . K 6 HOH B 25 4067 4067 HOH HOH . K 6 HOH B 26 4068 4068 HOH HOH . K 6 HOH B 27 4070 4070 HOH HOH . K 6 HOH B 28 4086 4086 HOH HOH . K 6 HOH B 29 4089 4089 HOH HOH . K 6 HOH B 30 4090 4090 HOH HOH . K 6 HOH B 31 4091 4091 HOH HOH . K 6 HOH B 32 4092 4092 HOH HOH . K 6 HOH B 33 4093 4093 HOH HOH . K 6 HOH B 34 4094 4094 HOH HOH . K 6 HOH B 35 4095 4095 HOH HOH . K 6 HOH B 36 4098 4098 HOH HOH . K 6 HOH B 37 4099 4099 HOH HOH . K 6 HOH B 38 4100 4100 HOH HOH . K 6 HOH B 39 4106 4106 HOH HOH . K 6 HOH B 40 4108 4108 HOH HOH . K 6 HOH B 41 4109 4109 HOH HOH . K 6 HOH B 42 4110 4110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 URA . . . H 5 39.087 7.371 100.371 1 34.96 ? N1 URA 5001 B 1 HETATM 2 C C2 URA . . . H 5 38.782 6.484 99.317 1 37.95 ? C2 URA 5001 B 1 HETATM 3 O O2 URA . . . H 5 38.459 5.298 99.526 1 37.51 ? O2 URA 5001 B 1 HETATM 4 N N3 URA . . . H 5 38.862 7.023 98.028 1 33.44 ? N3 URA 5001 B 1 HETATM 5 C C4 URA . . . H 5 39.212 8.333 97.714 1 25.65 ? C4 URA 5001 B 1 HETATM 6 O O4 URA . . . H 5 39.253 8.697 96.551 1 28.42 ? O4 URA 5001 B 1 HETATM 7 C C5 URA . . . H 5 39.511 9.184 98.87 1 27.23 ? C5 URA 5001 B 1 HETATM 8 C C6 URA . . . H 5 39.444 8.693 100.133 1 33.44 ? C6 URA 5001 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #