data_1BSK # _model_server_result.job_id zspNVbKcmW63gL60zYUjzg _model_server_result.datetime_utc '2024-12-26 18:20:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":171}' # _entry.id 1BSK # _exptl.entry_id 1BSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.404 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (S)-2-(PHOSPHONOXY)CAPROYL-L-LEUCYL-P-NITROANILIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1BSK _cell.length_a 99.17 _cell.length_b 99.17 _cell.length_c 110.755 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 90 A CYS 90 1_555 B ZN ZN . A ZN 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc2 A NE2 HIS 132 A HIS 132 1_555 B ZN ZN . A ZN 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc3 A NE2 HIS 136 A HIS 136 1_555 B ZN ZN . A ZN 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 B ZN ZN . A ZN 169 1_555 D O3 MLN . A MLN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C18 H28 N3 O8 P' _chem_comp.formula_weight 445.404 _chem_comp.id MLN _chem_comp.mon_nstd_flag . _chem_comp.name (S)-2-(PHOSPHONOXY)CAPROYL-L-LEUCYL-P-NITROANILIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 P1 MLN sing 237 n n O3 HOP3 MLN sing 238 n n P1 O1 MLN doub 239 n n P1 O2 MLN sing 240 n n P1 O4 MLN sing 241 n n O2 C5 MLN sing 242 n n O4 HOP4 MLN sing 243 n n C5 C6 MLN sing 244 n n C5 C7 MLN sing 245 n n C5 HC51 MLN sing 246 n n C6 O11 MLN doub 247 n n C6 N12 MLN sing 248 n n C7 C8 MLN sing 249 n n C7 HC71 MLN sing 250 n n C7 HC72 MLN sing 251 n n C8 C9 MLN sing 252 n n C8 HC81 MLN sing 253 n n C8 HC82 MLN sing 254 n n C9 C10 MLN sing 255 n n C9 HC91 MLN sing 256 n n C9 HC92 MLN sing 257 n n C10 H101 MLN sing 258 n n C10 H102 MLN sing 259 n n C10 H103 MLN sing 260 n n N12 C13 MLN sing 261 n n N12 HN12 MLN sing 262 n n C13 C14 MLN sing 263 n n C13 C18 MLN sing 264 n n C13 HC13 MLN sing 265 n n C14 C15 MLN sing 266 n n C14 H141 MLN sing 267 n n C14 H142 MLN sing 268 n n C15 C16 MLN sing 269 n n C15 C17 MLN sing 270 n n C15 HC15 MLN sing 271 n n C16 H161 MLN sing 272 n n C16 H162 MLN sing 273 n n C16 H163 MLN sing 274 n n C17 H171 MLN sing 275 n n C17 H172 MLN sing 276 n n C17 H173 MLN sing 277 n n C18 N19 MLN sing 278 n n C18 O20 MLN doub 279 n n N19 C21 MLN sing 280 n n N19 HN19 MLN sing 281 n n C21 C22 MLN doub 282 n y C21 C26 MLN sing 283 n y C22 C23 MLN sing 284 n y C22 HC22 MLN sing 285 n n C23 C24 MLN doub 286 n y C23 HC23 MLN sing 287 n n C24 C25 MLN sing 288 n y C24 N27 MLN sing 289 n n C25 C26 MLN doub 290 n y C25 HC25 MLN sing 291 n n C26 HC26 MLN sing 292 n n N27 O28 MLN sing 293 n n N27 O29 MLN doub 294 n n # _atom_sites.entry_id 1BSK _atom_sites.fract_transf_matrix[1][1] 0.010084 _atom_sites.fract_transf_matrix[1][2] 0.005822 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 169 1 ZN ZN . C 3 PO4 A 1 170 1 PO4 PO4 . D 4 MLN A 1 171 1 MLN MLN . E 5 HOH A 1 172 1 HOH HOH . E 5 HOH A 2 173 2 HOH HOH . E 5 HOH A 3 174 3 HOH HOH . E 5 HOH A 4 175 4 HOH HOH . E 5 HOH A 5 176 5 HOH HOH . E 5 HOH A 6 177 6 HOH HOH . E 5 HOH A 7 178 7 HOH HOH . E 5 HOH A 8 179 8 HOH HOH . E 5 HOH A 9 180 9 HOH HOH . E 5 HOH A 10 181 10 HOH HOH . E 5 HOH A 11 182 11 HOH HOH . E 5 HOH A 12 183 12 HOH HOH . E 5 HOH A 13 184 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 MLN . . . D 4 40.907 53.333 71.581 1 18.84 ? O3 MLN 171 A 1 HETATM 2 P P1 MLN . . . D 4 40.049 54.23 72.615 1 18.96 ? P1 MLN 171 A 1 HETATM 3 O O2 MLN . . . D 4 41.089 54.589 74.006 1 16.5 ? O2 MLN 171 A 1 HETATM 4 O O4 MLN . . . D 4 38.673 53.514 72.913 1 18.24 ? O4 MLN 171 A 1 HETATM 5 C C5 MLN . . . D 4 41.348 53.507 74.852 1 15.29 ? C5 MLN 171 A 1 HETATM 6 C C6 MLN . . . D 4 40.819 53.903 76.198 1 18.68 ? C6 MLN 171 A 1 HETATM 7 C C7 MLN . . . D 4 42.886 53.445 74.576 1 14.21 ? C7 MLN 171 A 1 HETATM 8 C C8 MLN . . . D 4 43.956 53.903 75.598 1 18.65 ? C8 MLN 171 A 1 HETATM 9 C C9 MLN . . . D 4 45.257 53.07 75.821 1 23.64 ? C9 MLN 171 A 1 HETATM 10 C C10 MLN . . . D 4 44.755 51.737 76.336 1 32.67 ? C10 MLN 171 A 1 HETATM 11 O O11 MLN . . . D 4 40.474 55.023 76.456 1 19.94 ? O11 MLN 171 A 1 HETATM 12 N N12 MLN . . . D 4 40.791 52.844 77.055 1 21.2 ? N12 MLN 171 A 1 HETATM 13 C C13 MLN . . . D 4 40.445 53.002 78.464 1 18.41 ? C13 MLN 171 A 1 HETATM 14 C C14 MLN . . . D 4 39.17 52.197 78.685 1 15.49 ? C14 MLN 171 A 1 HETATM 15 C C15 MLN . . . D 4 38.036 52.87 77.927 1 16.18 ? C15 MLN 171 A 1 HETATM 16 C C16 MLN . . . D 4 36.861 51.956 77.959 1 14.54 ? C16 MLN 171 A 1 HETATM 17 C C17 MLN . . . D 4 37.565 54.179 78.529 1 12.6 ? C17 MLN 171 A 1 HETATM 18 C C18 MLN . . . D 4 41.723 52.54 79.118 1 21.24 ? C18 MLN 171 A 1 HETATM 19 N N19 MLN . . . D 4 42.342 53.454 80.181 1 20.45 ? N19 MLN 171 A 1 HETATM 20 O O20 MLN . . . D 4 42.241 51.486 78.8 1 25.27 ? O20 MLN 171 A 1 HETATM 21 C C21 MLN . . . D 4 43.361 53.163 80.933 1 17.8 ? C21 MLN 171 A 1 HETATM 22 C C22 MLN . . . D 4 43.866 51.844 81.07 1 17.5 ? C22 MLN 171 A 1 HETATM 23 C C23 MLN . . . D 4 44.857 51.611 82.037 1 21.97 ? C23 MLN 171 A 1 HETATM 24 C C24 MLN . . . D 4 45.418 52.736 82.742 1 25 ? C24 MLN 171 A 1 HETATM 25 C C25 MLN . . . D 4 44.941 54.064 82.584 1 22.69 ? C25 MLN 171 A 1 HETATM 26 C C26 MLN . . . D 4 43.926 54.28 81.605 1 20.37 ? C26 MLN 171 A 1 HETATM 27 N N27 MLN . . . D 4 46.51 52.508 83.628 1 29.57 ? N27 MLN 171 A 1 HETATM 28 O O28 MLN . . . D 4 47.158 53.481 84.196 1 32.23 ? O28 MLN 171 A 1 HETATM 29 O O29 MLN . . . D 4 46.864 51.244 83.853 1 33.83 ? O29 MLN 171 A 1 # _model_server_stats.io_time_ms 108 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 29 #