data_1BSO # _model_server_result.job_id mWv5ZiH68uS9tLCPcDpV3A _model_server_result.datetime_utc '2024-11-22 03:11:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bso # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":388}' # _entry.id 1BSO # _exptl.entry_id 1BSO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 279.214 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '12-BROMODODECANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1BSO _cell.length_a 54.026 _cell.length_b 54.026 _cell.length_c 112.183 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 112.183 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula 'C12 H23 Br O2' _chem_comp.formula_weight 279.214 _chem_comp.id BRC _chem_comp.mon_nstd_flag . _chem_comp.name '12-BROMODODECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 OE1 BRC doub 70 n n C1 OE2 BRC sing 71 n n C1 C2 BRC sing 72 n n OE2 HO2 BRC sing 73 n n C2 C3 BRC sing 74 n n C2 H21 BRC sing 75 n n C2 H22 BRC sing 76 n n C3 C4 BRC sing 77 n n C3 H31 BRC sing 78 n n C3 H32 BRC sing 79 n n C4 C5 BRC sing 80 n n C4 H41 BRC sing 81 n n C4 H42 BRC sing 82 n n C5 C6 BRC sing 83 n n C5 H51 BRC sing 84 n n C5 H52 BRC sing 85 n n C6 C7 BRC sing 86 n n C6 H61 BRC sing 87 n n C6 H62 BRC sing 88 n n C7 C8 BRC sing 89 n n C7 H71 BRC sing 90 n n C7 H72 BRC sing 91 n n C8 C9 BRC sing 92 n n C8 H81 BRC sing 93 n n C8 H82 BRC sing 94 n n C9 C10 BRC sing 95 n n C9 H91 BRC sing 96 n n C9 H92 BRC sing 97 n n C10 C11 BRC sing 98 n n C10 H101 BRC sing 99 n n C10 H102 BRC sing 100 n n C11 C12 BRC sing 101 n n C11 H111 BRC sing 102 n n C11 H112 BRC sing 103 n n C12 BR1 BRC sing 104 n n C12 H121 BRC sing 105 n n C12 H122 BRC sing 106 n n # _atom_sites.entry_id 1BSO _atom_sites.fract_transf_matrix[1][1] 0.01851 _atom_sites.fract_transf_matrix[1][2] 0.010687 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008914 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BRC A 1 388 388 BRC BRC . C 3 HOH A 1 165 165 HOH HOH . C 3 HOH A 2 166 166 HOH HOH . C 3 HOH A 3 167 167 HOH HOH . C 3 HOH A 4 168 168 HOH HOH . C 3 HOH A 5 169 169 HOH HOH . C 3 HOH A 6 170 170 HOH HOH . C 3 HOH A 7 171 171 HOH HOH . C 3 HOH A 8 172 172 HOH HOH . C 3 HOH A 9 173 173 HOH HOH . C 3 HOH A 10 174 174 HOH HOH . C 3 HOH A 11 175 175 HOH HOH . C 3 HOH A 12 176 176 HOH HOH . C 3 HOH A 13 177 177 HOH HOH . C 3 HOH A 14 178 178 HOH HOH . C 3 HOH A 15 179 179 HOH HOH . C 3 HOH A 16 180 180 HOH HOH . C 3 HOH A 17 181 181 HOH HOH . C 3 HOH A 18 182 182 HOH HOH . C 3 HOH A 19 183 183 HOH HOH . C 3 HOH A 20 184 184 HOH HOH . C 3 HOH A 21 185 185 HOH HOH . C 3 HOH A 22 186 186 HOH HOH . C 3 HOH A 23 187 187 HOH HOH . C 3 HOH A 24 188 188 HOH HOH . C 3 HOH A 25 189 189 HOH HOH . C 3 HOH A 26 190 190 HOH HOH . C 3 HOH A 27 191 191 HOH HOH . C 3 HOH A 28 192 192 HOH HOH . C 3 HOH A 29 193 193 HOH HOH . C 3 HOH A 30 194 194 HOH HOH . C 3 HOH A 31 195 195 HOH HOH . C 3 HOH A 32 196 196 HOH HOH . C 3 HOH A 33 197 197 HOH HOH . C 3 HOH A 34 198 198 HOH HOH . C 3 HOH A 35 200 200 HOH HOH . C 3 HOH A 36 201 201 HOH HOH . C 3 HOH A 37 202 202 HOH HOH . C 3 HOH A 38 203 203 HOH HOH . C 3 HOH A 39 204 204 HOH HOH . C 3 HOH A 40 205 205 HOH HOH . C 3 HOH A 41 206 206 HOH HOH . C 3 HOH A 42 207 207 HOH HOH . C 3 HOH A 43 208 208 HOH HOH . C 3 HOH A 44 209 209 HOH HOH . C 3 HOH A 45 210 210 HOH HOH . C 3 HOH A 46 211 211 HOH HOH . C 3 HOH A 47 212 212 HOH HOH . C 3 HOH A 48 213 213 HOH HOH . C 3 HOH A 49 214 214 HOH HOH . C 3 HOH A 50 215 215 HOH HOH . C 3 HOH A 51 216 216 HOH HOH . C 3 HOH A 52 217 217 HOH HOH . C 3 HOH A 53 218 218 HOH HOH . C 3 HOH A 54 219 219 HOH HOH . C 3 HOH A 55 220 220 HOH HOH . C 3 HOH A 56 221 221 HOH HOH . C 3 HOH A 57 222 222 HOH HOH . C 3 HOH A 58 223 223 HOH HOH . C 3 HOH A 59 224 224 HOH HOH . C 3 HOH A 60 225 225 HOH HOH . C 3 HOH A 61 226 226 HOH HOH . C 3 HOH A 62 227 227 HOH HOH . C 3 HOH A 63 228 228 HOH HOH . C 3 HOH A 64 229 229 HOH HOH . C 3 HOH A 65 230 230 HOH HOH . C 3 HOH A 66 231 231 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BRC . . . B 2 2.468 2.575 38.357 1 84.68 ? C1 BRC 388 A 1 HETATM 2 O OE1 BRC . . . B 2 2.879 1.678 37.637 1 86.19 ? OE1 BRC 388 A 1 HETATM 3 O OE2 BRC . . . B 2 1.221 2.636 38.729 1 89.52 ? OE2 BRC 388 A 1 HETATM 4 C C2 BRC . . . B 2 3.332 3.696 38.913 1 78.41 ? C2 BRC 388 A 1 HETATM 5 C C3 BRC . . . B 2 3.638 4.891 38.001 1 64.3 ? C3 BRC 388 A 1 HETATM 6 C C4 BRC . . . B 2 4.573 5.814 38.766 1 53.13 ? C4 BRC 388 A 1 HETATM 7 C C5 BRC . . . B 2 5.046 7.077 38.051 1 46.62 ? C5 BRC 388 A 1 HETATM 8 C C6 BRC . . . B 2 6.534 7.314 38.352 1 43.47 ? C6 BRC 388 A 1 HETATM 9 C C7 BRC . . . B 2 7.195 8.329 37.439 1 33.84 ? C7 BRC 388 A 1 HETATM 10 C C8 BRC . . . B 2 8.668 8.542 37.747 1 29.44 ? C8 BRC 388 A 1 HETATM 11 C C9 BRC . . . B 2 9.284 9.558 36.815 1 29.15 ? C9 BRC 388 A 1 HETATM 12 C C10 BRC . . . B 2 10.709 9.928 37.143 1 27.89 ? C10 BRC 388 A 1 HETATM 13 C C11 BRC . . . B 2 11.237 10.954 36.17 1 30.05 ? C11 BRC 388 A 1 HETATM 14 C C12 BRC . . . B 2 12.659 11.376 36.451 1 27.63 ? C12 BRC 388 A 1 HETATM 15 BR BR1 BRC . . . B 2 13.145 12.895 35.395 1 57.2 ? BR1 BRC 388 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #