data_1BWA # _model_server_result.job_id R6d0FZOHZB6dwR53RdJcwQ _model_server_result.datetime_utc '2025-04-25 13:02:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bwa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":638}' # _entry.id 1BWA # _exptl.entry_id 1BWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 758.908 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "[4R-(4ALPHA,5ALPHA,6BETA,7BETA)]-3,3'-[[TETRAHYDRO-5,6-DIHYDROXY-2-OXO-4,7-BIS(PHENYLMETHYL)-1H-1,3-DIAZEPINE-1,3(2H)-D IYL] BIS(METHYLENE)]BIS[N-2-THIAZOLYLBENZAMIDE]" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1BWA _cell.length_a 62.8 _cell.length_b 62.8 _cell.length_c 83.5 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C41 H38 N6 O5 S2' _chem_comp.formula_weight 758.908 _chem_comp.id XV6 _chem_comp.mon_nstd_flag . _chem_comp.name "[4R-(4ALPHA,5ALPHA,6BETA,7BETA)]-3,3'-[[TETRAHYDRO-5,6-DIHYDROXY-2-OXO-4,7-BIS(PHENYLMETHYL)-1H-1,3-DIAZEPINE-1,3(2H)-D IYL] BIS(METHYLENE)]BIS[N-2-THIAZOLYLBENZAMIDE]" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms XV638 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 XV6 doub 376 n n O4 C4 XV6 sing 377 n n O4 HO41 XV6 sing 378 n n O5 C5 XV6 sing 379 n n O5 HO51 XV6 sing 380 n n N2 C1 XV6 sing 381 n n N2 C2 XV6 sing 382 n n N2 C3 XV6 sing 383 n n N7 C1 XV6 sing 384 n n N7 C6 XV6 sing 385 n n N7 C7 XV6 sing 386 n n C2 C20 XV6 sing 387 n n C2 H21 XV6 sing 388 n n C2 H22 XV6 sing 389 n n C3 C4 XV6 sing 390 n n C3 C31 XV6 sing 391 n n C3 H31 XV6 sing 392 n n C4 C5 XV6 sing 393 n n C4 H41 XV6 sing 394 n n C5 C6 XV6 sing 395 n n C5 H51 XV6 sing 396 n n C6 C61 XV6 sing 397 n n C6 H61 XV6 sing 398 n n C7 C70 XV6 sing 399 n n C7 H71 XV6 sing 400 n n C7 H72 XV6 sing 401 n n C31 C32 XV6 sing 402 n n C31 H311 XV6 sing 403 n n C31 H312 XV6 sing 404 n n C32 C33 XV6 doub 405 n y C32 C37 XV6 sing 406 n y C33 C34 XV6 sing 407 n y C33 H331 XV6 sing 408 n n C34 C35 XV6 doub 409 n y C34 H341 XV6 sing 410 n n C35 C36 XV6 sing 411 n y C35 H351 XV6 sing 412 n n C36 C37 XV6 doub 413 n y C36 H361 XV6 sing 414 n n C37 H371 XV6 sing 415 n n C61 C62 XV6 sing 416 n n C61 H611 XV6 sing 417 n n C61 H612 XV6 sing 418 n n C62 C63 XV6 doub 419 n y C62 C67 XV6 sing 420 n y C63 C64 XV6 sing 421 n y C63 H631 XV6 sing 422 n n C64 C65 XV6 doub 423 n y C64 H641 XV6 sing 424 n n C65 C66 XV6 sing 425 n y C65 H651 XV6 sing 426 n n C66 C67 XV6 doub 427 n y C66 H661 XV6 sing 428 n n C67 H671 XV6 sing 429 n n C20 C21 XV6 doub 430 n y C20 C25 XV6 sing 431 n y C21 C22 XV6 sing 432 n y C21 H211 XV6 sing 433 n n C22 C23 XV6 doub 434 n y C22 C26 XV6 sing 435 n n C23 C24 XV6 sing 436 n y C23 H231 XV6 sing 437 n n C24 C25 XV6 doub 438 n y C24 H241 XV6 sing 439 n n C25 H251 XV6 sing 440 n n C26 O26 XV6 doub 441 n n C26 N26 XV6 sing 442 n n N26 C27 XV6 sing 443 n n N26 HN26 XV6 sing 444 n n N27 C27 XV6 doub 445 n y N27 C28 XV6 sing 446 n y C27 S29 XV6 sing 447 n y C28 C29 XV6 doub 448 n y C28 H281 XV6 sing 449 n n S29 C29 XV6 sing 450 n y C29 H291 XV6 sing 451 n n C70 C71 XV6 doub 452 n y C70 C75 XV6 sing 453 n y C71 C72 XV6 sing 454 n y C71 H711 XV6 sing 455 n n C72 C73 XV6 doub 456 n y C72 C76 XV6 sing 457 n n C73 C74 XV6 sing 458 n y C73 H731 XV6 sing 459 n n C74 C75 XV6 doub 460 n y C74 H741 XV6 sing 461 n n C75 H751 XV6 sing 462 n n C76 O76 XV6 doub 463 n n C76 N76 XV6 sing 464 n n N76 C77 XV6 sing 465 n n N76 HN76 XV6 sing 466 n n N77 C77 XV6 doub 467 n y N77 C78 XV6 sing 468 n y C77 S79 XV6 sing 469 n y C78 C79 XV6 doub 470 n y C78 H781 XV6 sing 471 n n S79 C79 XV6 sing 472 n y C79 H791 XV6 sing 473 n n # _atom_sites.entry_id 1BWA _atom_sites.fract_transf_matrix[1][1] 0.015923 _atom_sites.fract_transf_matrix[1][2] 0.009193 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XV6 B 1 638 638 XV6 XV6 . D 3 HOH A 1 402 402 HOH HOH . D 3 HOH A 2 403 403 HOH HOH . D 3 HOH A 3 407 407 HOH HOH . D 3 HOH A 4 410 410 HOH HOH . D 3 HOH A 5 411 411 HOH HOH . D 3 HOH A 6 412 412 HOH HOH . D 3 HOH A 7 415 415 HOH HOH . D 3 HOH A 8 419 419 HOH HOH . D 3 HOH A 9 421 421 HOH HOH . D 3 HOH A 10 422 422 HOH HOH . D 3 HOH A 11 423 423 HOH HOH . D 3 HOH A 12 425 425 HOH HOH . D 3 HOH A 13 427 427 HOH HOH . D 3 HOH A 14 428 428 HOH HOH . D 3 HOH A 15 429 429 HOH HOH . D 3 HOH A 16 434 434 HOH HOH . D 3 HOH A 17 439 439 HOH HOH . D 3 HOH A 18 442 442 HOH HOH . D 3 HOH A 19 443 443 HOH HOH . D 3 HOH A 20 444 444 HOH HOH . D 3 HOH A 21 445 445 HOH HOH . D 3 HOH A 22 446 446 HOH HOH . D 3 HOH A 23 448 448 HOH HOH . D 3 HOH A 24 450 450 HOH HOH . D 3 HOH A 25 451 451 HOH HOH . D 3 HOH A 26 454 454 HOH HOH . D 3 HOH A 27 455 455 HOH HOH . D 3 HOH A 28 458 458 HOH HOH . D 3 HOH A 29 460 460 HOH HOH . D 3 HOH A 30 463 463 HOH HOH . D 3 HOH A 31 466 466 HOH HOH . D 3 HOH A 32 468 468 HOH HOH . D 3 HOH A 33 469 469 HOH HOH . D 3 HOH A 34 471 471 HOH HOH . E 3 HOH B 1 401 401 HOH HOH . E 3 HOH B 2 404 404 HOH HOH . E 3 HOH B 3 405 405 HOH HOH . E 3 HOH B 4 408 408 HOH HOH . E 3 HOH B 5 409 409 HOH HOH . E 3 HOH B 6 413 413 HOH HOH . E 3 HOH B 7 414 414 HOH HOH . E 3 HOH B 8 418 418 HOH HOH . E 3 HOH B 9 420 420 HOH HOH . E 3 HOH B 10 424 424 HOH HOH . E 3 HOH B 11 426 426 HOH HOH . E 3 HOH B 12 430 430 HOH HOH . E 3 HOH B 13 431 431 HOH HOH . E 3 HOH B 14 432 432 HOH HOH . E 3 HOH B 15 435 435 HOH HOH . E 3 HOH B 16 436 436 HOH HOH . E 3 HOH B 17 437 437 HOH HOH . E 3 HOH B 18 438 438 HOH HOH . E 3 HOH B 19 440 440 HOH HOH . E 3 HOH B 20 441 441 HOH HOH . E 3 HOH B 21 447 447 HOH HOH . E 3 HOH B 22 449 449 HOH HOH . E 3 HOH B 23 452 452 HOH HOH . E 3 HOH B 24 453 453 HOH HOH . E 3 HOH B 25 456 456 HOH HOH . E 3 HOH B 26 457 457 HOH HOH . E 3 HOH B 27 459 459 HOH HOH . E 3 HOH B 28 461 461 HOH HOH . E 3 HOH B 29 462 462 HOH HOH . E 3 HOH B 30 464 464 HOH HOH . E 3 HOH B 31 465 465 HOH HOH . E 3 HOH B 32 467 467 HOH HOH . E 3 HOH B 33 470 470 HOH HOH . E 3 HOH B 34 472 472 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 XV6 . . . C 2 -8.358 14.369 27.859 1 20.07 ? O1 XV6 638 B 1 HETATM 2 O O4 XV6 . . . C 2 -11.891 18.762 28.89 1 16.5 ? O4 XV6 638 B 1 HETATM 3 O O5 XV6 . . . C 2 -10.137 19.728 26.943 1 21.46 ? O5 XV6 638 B 1 HETATM 4 N N2 XV6 . . . C 2 -9.793 15.728 28.92 1 18.2 ? N2 XV6 638 B 1 HETATM 5 N N7 XV6 . . . C 2 -8.784 16.29 26.84 1 20.64 ? N7 XV6 638 B 1 HETATM 6 C C1 XV6 . . . C 2 -8.973 15.437 27.873 1 22.39 ? C1 XV6 638 B 1 HETATM 7 C C2 XV6 . . . C 2 -9.653 14.909 30.12 1 20.37 ? C2 XV6 638 B 1 HETATM 8 C C3 XV6 . . . C 2 -10.95 16.637 28.886 1 18.12 ? C3 XV6 638 B 1 HETATM 9 C C4 XV6 . . . C 2 -10.687 18.103 28.625 1 17.65 ? C4 XV6 638 B 1 HETATM 10 C C5 XV6 . . . C 2 -10.274 18.352 27.195 1 17.45 ? C5 XV6 638 B 1 HETATM 11 C C6 XV6 . . . C 2 -8.912 17.763 26.92 1 22.25 ? C6 XV6 638 B 1 HETATM 12 C C7 XV6 . . . C 2 -8.148 15.778 25.623 1 20.37 ? C7 XV6 638 B 1 HETATM 13 C C31 XV6 . . . C 2 -12.078 16.009 28.029 1 21.6 ? C31 XV6 638 B 1 HETATM 14 C C32 XV6 . . . C 2 -12.589 14.725 28.635 1 29.42 ? C32 XV6 638 B 1 HETATM 15 C C33 XV6 . . . C 2 -12.159 13.476 28.118 1 30.54 ? C33 XV6 638 B 1 HETATM 16 C C34 XV6 . . . C 2 -12.537 12.283 28.772 1 32.39 ? C34 XV6 638 B 1 HETATM 17 C C35 XV6 . . . C 2 -13.344 12.332 29.934 1 33.23 ? C35 XV6 638 B 1 HETATM 18 C C36 XV6 . . . C 2 -13.783 13.579 30.438 1 32.63 ? C36 XV6 638 B 1 HETATM 19 C C37 XV6 . . . C 2 -13.412 14.779 29.786 1 29.9 ? C37 XV6 638 B 1 HETATM 20 C C61 XV6 . . . C 2 -7.763 18.339 27.79 1 24.03 ? C61 XV6 638 B 1 HETATM 21 C C62 XV6 . . . C 2 -6.393 18.243 27.151 1 28.82 ? C62 XV6 638 B 1 HETATM 22 C C63 XV6 . . . C 2 -6.114 18.991 25.978 1 29.26 ? C63 XV6 638 B 1 HETATM 23 C C64 XV6 . . . C 2 -4.83 18.931 25.404 1 31.07 ? C64 XV6 638 B 1 HETATM 24 C C65 XV6 . . . C 2 -3.836 18.118 26.004 1 32.38 ? C65 XV6 638 B 1 HETATM 25 C C66 XV6 . . . C 2 -4.114 17.368 27.168 1 30.03 ? C66 XV6 638 B 1 HETATM 26 C C67 XV6 . . . C 2 -5.402 17.433 27.745 1 28.22 ? C67 XV6 638 B 1 HETATM 27 C C20 XV6 . . . C 2 -9.615 15.624 31.439 1 20.82 ? C20 XV6 638 B 1 HETATM 28 C C21 XV6 . . . C 2 -10.383 15.108 32.486 1 18.21 ? C21 XV6 638 B 1 HETATM 29 C C22 XV6 . . . C 2 -10.315 15.718 33.746 1 18.84 ? C22 XV6 638 B 1 HETATM 30 C C23 XV6 . . . C 2 -9.498 16.844 33.961 1 20.62 ? C23 XV6 638 B 1 HETATM 31 C C24 XV6 . . . C 2 -8.728 17.367 32.904 1 19.29 ? C24 XV6 638 B 1 HETATM 32 C C25 XV6 . . . C 2 -8.788 16.753 31.639 1 21.37 ? C25 XV6 638 B 1 HETATM 33 C C26 XV6 . . . C 2 -11.04 15.127 34.908 1 22.8 ? C26 XV6 638 B 1 HETATM 34 O O26 XV6 . . . C 2 -11.438 15.773 35.864 1 19.4 ? O26 XV6 638 B 1 HETATM 35 N N26 XV6 . . . C 2 -11.163 13.797 34.842 1 22.22 ? N26 XV6 638 B 1 HETATM 36 N N27 XV6 . . . C 2 -11.821 11.735 36.072 1 26.52 ? N27 XV6 638 B 1 HETATM 37 C C27 XV6 . . . C 2 -11.764 13.073 35.95 1 24.37 ? C27 XV6 638 B 1 HETATM 38 C C28 XV6 . . . C 2 -12.449 11.339 37.227 1 23.88 ? C28 XV6 638 B 1 HETATM 39 S S29 XV6 . . . C 2 -12.496 13.825 37.269 1 27.63 ? S29 XV6 638 B 1 HETATM 40 C C29 XV6 . . . C 2 -12.908 12.387 38.052 1 29.26 ? C29 XV6 638 B 1 HETATM 41 C C70 XV6 . . . C 2 -8.852 16.06 24.321 1 18.75 ? C70 XV6 638 B 1 HETATM 42 C C71 XV6 . . . C 2 -8.061 16.437 23.234 1 17.85 ? C71 XV6 638 B 1 HETATM 43 C C72 XV6 . . . C 2 -8.674 16.687 21.991 1 17.06 ? C72 XV6 638 B 1 HETATM 44 C C73 XV6 . . . C 2 -10.062 16.55 21.831 1 17.58 ? C73 XV6 638 B 1 HETATM 45 C C74 XV6 . . . C 2 -10.851 16.159 22.93 1 17.14 ? C74 XV6 638 B 1 HETATM 46 C C75 XV6 . . . C 2 -10.25 15.92 24.178 1 18.07 ? C75 XV6 638 B 1 HETATM 47 C C76 XV6 . . . C 2 -7.834 17.114 20.842 1 20.36 ? C76 XV6 638 B 1 HETATM 48 O O76 XV6 . . . C 2 -8.243 17.792 19.912 1 15.21 ? O76 XV6 638 B 1 HETATM 49 N N76 XV6 . . . C 2 -6.572 16.656 20.94 1 21.38 ? N76 XV6 638 B 1 HETATM 50 N N77 XV6 . . . C 2 -4.4 16.096 19.912 1 24.53 ? N77 XV6 638 B 1 HETATM 51 C C77 XV6 . . . C 2 -5.541 16.808 19.911 1 25.32 ? C77 XV6 638 B 1 HETATM 52 C C78 XV6 . . . C 2 -3.646 16.333 18.785 1 28.59 ? C78 XV6 638 B 1 HETATM 53 S S79 XV6 . . . C 2 -5.664 17.769 18.503 1 28.9 ? S79 XV6 638 B 1 HETATM 54 C C79 XV6 . . . C 2 -4.191 17.253 17.861 1 30.52 ? C79 XV6 638 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 54 #