data_1BWC # _model_server_result.job_id 21CezYfqmP72nqOjRJ-pHw _model_server_result.datetime_utc '2024-12-07 11:07:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bwc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4058}' # _entry.id 1BWC # _exptl.entry_id 1BWC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.273 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(PROP-2-ENE-1-SULFINYL)-PROPENE-1-THIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BWC _cell.length_a 64.3 _cell.length_b 146.9 _cell.length_c 128.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BWC _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 146.9 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 58 1_555 A SG CYS 63 A CYS 63 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 90 A CYS 90 1_555 A SG CYS 90 A CYS 90 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? covale ? covale1 A SG CYS 58 A CYS 58 1_555 D S5 AJ3 . A AJ3 4058 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C6 H10 O S2' _chem_comp.formula_weight 162.273 _chem_comp.id AJ3 _chem_comp.mon_nstd_flag . _chem_comp.name 3-(PROP-2-ENE-1-SULFINYL)-PROPENE-1-THIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S5 C6B AJ3 sing 1 n n S5 HS5 AJ3 sing 2 n n C6B C7 AJ3 doub 3 e n C6B H6B AJ3 sing 4 n n C7 C8B AJ3 sing 5 n n C7 H7 AJ3 sing 6 n n C8B S9 AJ3 sing 7 n n C8B H8B1 AJ3 sing 8 n n C8B H8B2 AJ3 sing 9 n n S9 C10 AJ3 sing 10 n n S9 O13 AJ3 doub 11 n n C10 C11 AJ3 sing 12 n n C10 H101 AJ3 sing 13 n n C10 H102 AJ3 sing 14 n n C11 C12 AJ3 doub 15 n n C11 H11 AJ3 sing 16 n n C12 H121 AJ3 sing 17 n n C12 H122 AJ3 sing 18 n n # _atom_sites.entry_id 1BWC _atom_sites.fract_transf_matrix[1][1] 0.015552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006807 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 3000 3000 CL CL . C 3 FAD A 1 479 479 FAD FAD . D 4 AJ3 A 1 4058 4058 AJ3 AJ3 . E 5 HOH A 1 4059 2 HOH HOH . E 5 HOH A 2 4060 4 HOH HOH . E 5 HOH A 3 4061 5 HOH HOH . E 5 HOH A 4 4062 6 HOH HOH . E 5 HOH A 5 4063 7 HOH HOH . E 5 HOH A 6 4064 8 HOH HOH . E 5 HOH A 7 4065 9 HOH HOH . E 5 HOH A 8 4066 10 HOH HOH . E 5 HOH A 9 4067 11 HOH HOH . E 5 HOH A 10 4068 484 HOH HOH . E 5 HOH A 11 4069 486 HOH HOH . E 5 HOH A 12 4070 488 HOH HOH . E 5 HOH A 13 4071 490 HOH HOH . E 5 HOH A 14 4072 492 HOH HOH . E 5 HOH A 15 4073 494 HOH HOH . E 5 HOH A 16 4074 496 HOH HOH . E 5 HOH A 17 4075 498 HOH HOH . E 5 HOH A 18 4076 500 HOH HOH . E 5 HOH A 19 4077 502 HOH HOH . E 5 HOH A 20 4078 504 HOH HOH . E 5 HOH A 21 4079 506 HOH HOH . E 5 HOH A 22 4080 508 HOH HOH . E 5 HOH A 23 4081 510 HOH HOH . E 5 HOH A 24 4082 512 HOH HOH . E 5 HOH A 25 4083 514 HOH HOH . E 5 HOH A 26 4084 519 HOH HOH . E 5 HOH A 27 4085 521 HOH HOH . E 5 HOH A 28 4086 523 HOH HOH . E 5 HOH A 29 4087 527 HOH HOH . E 5 HOH A 30 4088 529 HOH HOH . E 5 HOH A 31 4089 532 HOH HOH . E 5 HOH A 32 4090 534 HOH HOH . E 5 HOH A 33 4091 537 HOH HOH . E 5 HOH A 34 4092 540 HOH HOH . E 5 HOH A 35 4093 543 HOH HOH . E 5 HOH A 36 4094 546 HOH HOH . E 5 HOH A 37 4095 553 HOH HOH . E 5 HOH A 38 4096 556 HOH HOH . E 5 HOH A 39 4097 562 HOH HOH . E 5 HOH A 40 4098 566 HOH HOH . E 5 HOH A 41 4099 569 HOH HOH . E 5 HOH A 42 4100 575 HOH HOH . E 5 HOH A 43 4101 579 HOH HOH . E 5 HOH A 44 4102 581 HOH HOH . E 5 HOH A 45 4103 585 HOH HOH . E 5 HOH A 46 4104 588 HOH HOH . E 5 HOH A 47 4105 590 HOH HOH . E 5 HOH A 48 4106 599 HOH HOH . E 5 HOH A 49 4107 614 HOH HOH . E 5 HOH A 50 4108 616 HOH HOH . E 5 HOH A 51 4109 620 HOH HOH . E 5 HOH A 52 4110 627 HOH HOH . E 5 HOH A 53 4111 647 HOH HOH . E 5 HOH A 54 4112 656 HOH HOH . E 5 HOH A 55 4113 722 HOH HOH . E 5 HOH A 56 4114 762 HOH HOH . E 5 HOH A 57 4115 768 HOH HOH . E 5 HOH A 58 4116 778 HOH HOH . E 5 HOH A 59 4117 793 HOH HOH . E 5 HOH A 60 4118 797 HOH HOH . E 5 HOH A 61 4119 483 HOH HOH . E 5 HOH A 62 4120 485 HOH HOH . E 5 HOH A 63 4121 487 HOH HOH . E 5 HOH A 64 4122 489 HOH HOH . E 5 HOH A 65 4123 491 HOH HOH . E 5 HOH A 66 4124 493 HOH HOH . E 5 HOH A 67 4125 495 HOH HOH . E 5 HOH A 68 4126 497 HOH HOH . E 5 HOH A 69 4127 501 HOH HOH . E 5 HOH A 70 4128 505 HOH HOH . E 5 HOH A 71 4129 507 HOH HOH . E 5 HOH A 72 4130 509 HOH HOH . E 5 HOH A 73 4131 513 HOH HOH . E 5 HOH A 74 4132 518 HOH HOH . E 5 HOH A 75 4133 520 HOH HOH . E 5 HOH A 76 4134 522 HOH HOH . E 5 HOH A 77 4135 526 HOH HOH . E 5 HOH A 78 4136 531 HOH HOH . E 5 HOH A 79 4137 533 HOH HOH . E 5 HOH A 80 4138 536 HOH HOH . E 5 HOH A 81 4139 539 HOH HOH . E 5 HOH A 82 4140 541 HOH HOH . E 5 HOH A 83 4141 550 HOH HOH . E 5 HOH A 84 4142 552 HOH HOH . E 5 HOH A 85 4143 554 HOH HOH . E 5 HOH A 86 4144 560 HOH HOH . E 5 HOH A 87 4145 563 HOH HOH . E 5 HOH A 88 4146 565 HOH HOH . E 5 HOH A 89 4147 567 HOH HOH . E 5 HOH A 90 4148 572 HOH HOH . E 5 HOH A 91 4149 580 HOH HOH . E 5 HOH A 92 4150 583 HOH HOH . E 5 HOH A 93 4151 587 HOH HOH . E 5 HOH A 94 4152 594 HOH HOH . E 5 HOH A 95 4153 601 HOH HOH . E 5 HOH A 96 4154 604 HOH HOH . E 5 HOH A 97 4155 613 HOH HOH . E 5 HOH A 98 4156 615 HOH HOH . E 5 HOH A 99 4157 621 HOH HOH . E 5 HOH A 100 4158 626 HOH HOH . E 5 HOH A 101 4159 629 HOH HOH . E 5 HOH A 102 4160 632 HOH HOH . E 5 HOH A 103 4161 699 HOH HOH . E 5 HOH A 104 4162 755 HOH HOH . E 5 HOH A 105 4163 792 HOH HOH . E 5 HOH A 106 4164 814 HOH HOH . E 5 HOH A 107 4165 826 HOH HOH . E 5 HOH A 108 4166 981 HOH HOH . E 5 HOH A 109 4167 524 HOH HOH . E 5 HOH A 110 4168 525 HOH HOH . E 5 HOH A 111 4169 574 HOH HOH . E 5 HOH A 112 4170 503 HOH HOH . E 5 HOH A 113 4171 516 HOH HOH . E 5 HOH A 114 4172 551 HOH HOH . E 5 HOH A 115 4173 528 HOH HOH . E 5 HOH A 116 4174 1 HOH HOH . E 5 HOH A 117 4175 825 HOH HOH . E 5 HOH A 118 4176 1003 HOH HOH . E 5 HOH A 119 4177 1004 HOH HOH . E 5 HOH A 120 4178 1005 HOH HOH . E 5 HOH A 121 4179 1007 HOH HOH . E 5 HOH A 122 4180 1008 HOH HOH . E 5 HOH A 123 4181 1010 HOH HOH . E 5 HOH A 124 4182 982 HOH HOH . E 5 HOH A 125 4183 985 HOH HOH . E 5 HOH A 126 4184 986 HOH HOH . E 5 HOH A 127 4185 989 HOH HOH . E 5 HOH A 128 4186 990 HOH HOH . E 5 HOH A 129 4187 991 HOH HOH . E 5 HOH A 130 4188 992 HOH HOH . E 5 HOH A 131 4189 994 HOH HOH . E 5 HOH A 132 4190 997 HOH HOH . E 5 HOH A 133 4191 999 HOH HOH . E 5 HOH A 134 4192 1011 HOH HOH . E 5 HOH A 135 4193 1012 HOH HOH . E 5 HOH A 136 4194 1015 HOH HOH . E 5 HOH A 137 4195 1016 HOH HOH . E 5 HOH A 138 4196 1017 HOH HOH . E 5 HOH A 139 4197 1002 HOH HOH . E 5 HOH A 140 4198 1006 HOH HOH . E 5 HOH A 141 4199 1009 HOH HOH . E 5 HOH A 142 4200 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S5 AJ3 . . . D 4 26.217 61.601 18.383 0.8 42.56 ? S5 AJ3 4058 A 1 HETATM 2 C C6B AJ3 . . . D 4 25.139 62.968 18.7 0.8 41.73 ? C6B AJ3 4058 A 1 HETATM 3 C C7 AJ3 . . . D 4 24.395 62.963 19.809 0.8 44.02 ? C7 AJ3 4058 A 1 HETATM 4 C C8B AJ3 . . . D 4 23.708 64.21 20.277 0.8 46.73 ? C8B AJ3 4058 A 1 HETATM 5 S S9 AJ3 . . . D 4 22.199 63.804 21.27 0.8 50.29 ? S9 AJ3 4058 A 1 HETATM 6 C C10 AJ3 . . . D 4 20.834 64.944 20.788 0.8 47.83 ? C10 AJ3 4058 A 1 HETATM 7 C C11 AJ3 . . . D 4 20.224 65.56 21.993 0.8 47.33 ? C11 AJ3 4058 A 1 HETATM 8 C C12 AJ3 . . . D 4 20.985 66.13 22.901 0.8 47.3 ? C12 AJ3 4058 A 1 HETATM 9 O O13 AJ3 . . . D 4 21.764 62.373 20.988 0.8 47.43 ? O13 AJ3 4058 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #