data_1BXD
#
_model_server_result.job_id            AavqflPr-TpiMA2hpCcOkQ 
_model_server_result.datetime_utc      '2025-03-04 23:19:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1bxd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":451}' 
#
_entry.id    1BXD 
#
_exptl.entry_id    1BXD 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1BXD 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1BXD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     1BXD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           ANP 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      451 
_pdbx_nonpoly_scheme.auth_seq_num     451 
_pdbx_nonpoly_scheme.pdb_mon_id       ANP 
_pdbx_nonpoly_scheme.auth_mon_id      ANP 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . B 2 -16.402 7.722 -11.302 1 12.47 ? PG ANP 451 A 1 
HETATM 2 O O1G ANP . . . B 2 -17.226 8.751 -10.629 1 14.96 ? O1G ANP 451 A 1 
HETATM 3 O O2G ANP . . . B 2 -16.926 7.158 -12.566 1 10.96 ? O2G ANP 451 A 1 
HETATM 4 O O3G ANP . . . B 2 -16.316 6.486 -10.276 1 14.2 ? O3G ANP 451 A 1 
HETATM 5 P PB ANP . . . B 2 -14.477 8.091 -13.074 1 11.61 ? PB ANP 451 A 1 
HETATM 6 O O1B ANP . . . B 2 -15.487 8.733 -13.947 1 14.01 ? O1B ANP 451 A 1 
HETATM 7 O O2B ANP . . . B 2 -13.062 8.49 -13.269 1 15.08 ? O2B ANP 451 A 1 
HETATM 8 N N3B ANP . . . B 2 -14.893 8.265 -11.517 1 0 ? N3B ANP 451 A 1 
HETATM 9 P PA ANP . . . B 2 -13.353 5.457 -13.682 1 14.01 ? PA ANP 451 A 1 
HETATM 10 O O1A ANP . . . B 2 -12.306 6.135 -14.479 1 15.21 ? O1A ANP 451 A 1 
HETATM 11 O O2A ANP . . . B 2 -13.003 4.831 -12.389 1 13.6 ? O2A ANP 451 A 1 
HETATM 12 O O3A ANP . . . B 2 -14.537 6.513 -13.418 1 13.84 ? O3A ANP 451 A 1 
HETATM 13 O O5' ANP . . . B 2 -14.053 4.334 -14.61 1 16.63 ? O5' ANP 451 A 1 
HETATM 14 C C5' ANP . . . B 2 -14.887 4.695 -15.717 1 15.02 ? C5' ANP 451 A 1 
HETATM 15 C C4' ANP . . . B 2 -14.308 5.845 -16.52 1 16.64 ? C4' ANP 451 A 1 
HETATM 16 O O4' ANP . . . B 2 -13.133 5.4 -17.188 1 16.01 ? O4' ANP 451 A 1 
HETATM 17 C C3' ANP . . . B 2 -15.288 6.298 -17.594 1 18.07 ? C3' ANP 451 A 1 
HETATM 18 O O3' ANP . . . B 2 -15.46 7.723 -17.576 1 21.99 ? O3' ANP 451 A 1 
HETATM 19 C C2' ANP . . . B 2 -14.691 5.847 -18.878 1 18.24 ? C2' ANP 451 A 1 
HETATM 20 O O2' ANP . . . B 2 -14.226 6.969 -19.64 1 16.32 ? O2' ANP 451 A 1 
HETATM 21 C C1' ANP . . . B 2 -13.531 4.955 -18.472 1 17.25 ? C1' ANP 451 A 1 
HETATM 22 N N9 ANP . . . B 2 -13.914 3.515 -18.365 1 16.89 ? N9 ANP 451 A 1 
HETATM 23 C C8 ANP . . . B 2 -15.073 2.872 -18.683 1 15.92 ? C8 ANP 451 A 1 
HETATM 24 N N7 ANP . . . B 2 -15.177 1.637 -18.364 1 17.45 ? N7 ANP 451 A 1 
HETATM 25 C C5 ANP . . . B 2 -13.944 1.39 -17.751 1 15.66 ? C5 ANP 451 A 1 
HETATM 26 C C6 ANP . . . B 2 -13.396 0.249 -17.166 1 15.56 ? C6 ANP 451 A 1 
HETATM 27 N N6 ANP . . . B 2 -14.035 -0.917 -17.102 1 11.16 ? N6 ANP 451 A 1 
HETATM 28 N N1 ANP . . . B 2 -12.156 0.351 -16.654 1 15.41 ? N1 ANP 451 A 1 
HETATM 29 C C2 ANP . . . B 2 -11.492 1.514 -16.709 1 15.41 ? C2 ANP 451 A 1 
HETATM 30 N N3 ANP . . . B 2 -11.921 2.66 -17.242 1 14.98 ? N3 ANP 451 A 1 
HETATM 31 C C4 ANP . . . B 2 -13.165 2.527 -17.748 1 14.99 ? C4 ANP 451 A 1 
HETATM 32 H HOG3 ANP . . . B 2 -16.295 6.853 -9.389 1 0 ? HOG3 ANP 451 A 1 
HETATM 33 H HNB1 ANP . . . B 2 -14.266 7.737 -10.943 1 0 ? HNB1 ANP 451 A 1 
HETATM 34 H "H5'1" ANP . . . B 2 -14.981 3.831 -16.386 1 0 ? "H5'1" ANP 451 A 1 
HETATM 35 H "H5'2" ANP . . . B 2 -15.874 4.97 -15.347 1 0 ? "H5'2" ANP 451 A 1 
HETATM 36 H H4' ANP . . . B 2 -14.065 6.663 -15.882 1 0 ? H4' ANP 451 A 1 
HETATM 37 H H3' ANP . . . B 2 -16.253 5.801 -17.45 1 0 ? H3' ANP 451 A 1 
HETATM 38 H HO3' ANP . . . B 2 -16.383 7.897 -17.365 1 0 ? HO3' ANP 451 A 1 
HETATM 39 H H2' ANP . . . B 2 -15.417 5.293 -19.446 1 0 ? H2' ANP 451 A 1 
HETATM 40 H HO2' ANP . . . B 2 -14.997 7.484 -19.889 1 0 ? HO2' ANP 451 A 1 
HETATM 41 H H1' ANP . . . B 2 -12.725 5.075 -19.161 1 0 ? H1' ANP 451 A 1 
HETATM 42 H H8 ANP . . . B 2 -15.892 3.382 -19.164 1 0 ? H8 ANP 451 A 1 
HETATM 43 H HN61 ANP . . . B 2 -14.963 -1.006 -17.488 1 0 ? HN61 ANP 451 A 1 
HETATM 44 H HN62 ANP . . . B 2 -13.592 -1.712 -16.663 1 0 ? HN62 ANP 451 A 1 
HETATM 45 H H2 ANP . . . B 2 -10.495 1.523 -16.271 1 0 ? H2 ANP 451 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    53 
_model_server_stats.query_time_ms           9067 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           45 
#