data_1BXI # _model_server_result.job_id sesuRJ3nvHJcUZmiFs9PoA _model_server_result.datetime_utc '2025-02-27 06:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bxi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 1BXI # _exptl.entry_id 1BXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BXI _cell.length_a 43.85 _cell.length_b 51.96 _cell.length_c 87.59 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C MSE 1 B MSE 1 1_555 B N GLU 2 B GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale2 B C ASP 115 B ASP 115 1_555 B N MSE 116 B MSE 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 B C MSE 116 B MSE 116 1_555 B N ASP 117 B ASP 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 B ND1 HIS 102 B HIS 102 1_555 C NI NI . B NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc2 B NE2 HIS 127 B HIS 127 1_555 C NI NI . B NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc3 C NI NI . B NI 301 1_555 D O3 PO4 . B PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 279 n n P O2 PO4 sing 280 n n P O3 PO4 sing 281 n n P O4 PO4 sing 282 n n # _atom_sites.entry_id 1BXI _atom_sites.fract_transf_matrix[1][1] 0.022805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NI B 1 301 301 NI NI . D 4 PO4 B 1 403 403 PO4 PO4 . E 5 HOH A 1 87 4 HOH HOH . E 5 HOH A 2 88 8 HOH HOH . E 5 HOH A 3 89 9 HOH HOH . E 5 HOH A 4 90 11 HOH HOH . E 5 HOH A 5 91 12 HOH HOH . E 5 HOH A 6 92 13 HOH HOH . E 5 HOH A 7 93 15 HOH HOH . E 5 HOH A 8 94 16 HOH HOH . E 5 HOH A 9 95 18 HOH HOH . E 5 HOH A 10 96 23 HOH HOH . E 5 HOH A 11 97 24 HOH HOH . E 5 HOH A 12 98 27 HOH HOH . E 5 HOH A 13 99 28 HOH HOH . E 5 HOH A 14 100 35 HOH HOH . E 5 HOH A 15 101 37 HOH HOH . E 5 HOH A 16 102 38 HOH HOH . E 5 HOH A 17 103 39 HOH HOH . E 5 HOH A 18 104 40 HOH HOH . E 5 HOH A 19 105 42 HOH HOH . E 5 HOH A 20 106 45 HOH HOH . E 5 HOH A 21 107 47 HOH HOH . E 5 HOH A 22 108 51 HOH HOH . E 5 HOH A 23 109 52 HOH HOH . E 5 HOH A 24 110 55 HOH HOH . E 5 HOH A 25 111 56 HOH HOH . E 5 HOH A 26 112 60 HOH HOH . E 5 HOH A 27 113 62 HOH HOH . E 5 HOH A 28 114 66 HOH HOH . E 5 HOH A 29 115 67 HOH HOH . E 5 HOH A 30 116 69 HOH HOH . E 5 HOH A 31 117 71 HOH HOH . E 5 HOH A 32 118 73 HOH HOH . E 5 HOH A 33 119 74 HOH HOH . E 5 HOH A 34 120 75 HOH HOH . E 5 HOH A 35 121 76 HOH HOH . E 5 HOH A 36 122 80 HOH HOH . E 5 HOH A 37 123 81 HOH HOH . E 5 HOH A 38 124 82 HOH HOH . E 5 HOH A 39 125 83 HOH HOH . E 5 HOH A 40 126 102 HOH HOH . F 5 HOH B 1 404 1 HOH HOH . F 5 HOH B 2 405 2 HOH HOH . F 5 HOH B 3 406 3 HOH HOH . F 5 HOH B 4 407 5 HOH HOH . F 5 HOH B 5 408 6 HOH HOH . F 5 HOH B 6 409 7 HOH HOH . F 5 HOH B 7 410 10 HOH HOH . F 5 HOH B 8 411 14 HOH HOH . F 5 HOH B 9 412 17 HOH HOH . F 5 HOH B 10 413 19 HOH HOH . F 5 HOH B 11 414 20 HOH HOH . F 5 HOH B 12 415 21 HOH HOH . F 5 HOH B 13 416 22 HOH HOH . F 5 HOH B 14 417 25 HOH HOH . F 5 HOH B 15 418 26 HOH HOH . F 5 HOH B 16 419 29 HOH HOH . F 5 HOH B 17 420 30 HOH HOH . F 5 HOH B 18 421 31 HOH HOH . F 5 HOH B 19 422 32 HOH HOH . F 5 HOH B 20 423 33 HOH HOH . F 5 HOH B 21 424 34 HOH HOH . F 5 HOH B 22 425 36 HOH HOH . F 5 HOH B 23 426 41 HOH HOH . F 5 HOH B 24 427 43 HOH HOH . F 5 HOH B 25 428 44 HOH HOH . F 5 HOH B 26 429 46 HOH HOH . F 5 HOH B 27 430 48 HOH HOH . F 5 HOH B 28 431 49 HOH HOH . F 5 HOH B 29 432 50 HOH HOH . F 5 HOH B 30 433 53 HOH HOH . F 5 HOH B 31 434 54 HOH HOH . F 5 HOH B 32 435 57 HOH HOH . F 5 HOH B 33 436 58 HOH HOH . F 5 HOH B 34 437 59 HOH HOH . F 5 HOH B 35 438 61 HOH HOH . F 5 HOH B 36 439 63 HOH HOH . F 5 HOH B 37 440 64 HOH HOH . F 5 HOH B 38 441 65 HOH HOH . F 5 HOH B 39 442 68 HOH HOH . F 5 HOH B 40 443 70 HOH HOH . F 5 HOH B 41 444 72 HOH HOH . F 5 HOH B 42 445 77 HOH HOH . F 5 HOH B 43 446 78 HOH HOH . F 5 HOH B 44 447 79 HOH HOH . F 5 HOH B 45 448 84 HOH HOH . F 5 HOH B 46 449 85 HOH HOH . F 5 HOH B 47 450 86 HOH HOH . F 5 HOH B 48 451 87 HOH HOH . F 5 HOH B 49 452 88 HOH HOH . F 5 HOH B 50 453 89 HOH HOH . F 5 HOH B 51 454 90 HOH HOH . F 5 HOH B 52 455 91 HOH HOH . F 5 HOH B 53 456 92 HOH HOH . F 5 HOH B 54 457 93 HOH HOH . F 5 HOH B 55 458 94 HOH HOH . F 5 HOH B 56 459 96 HOH HOH . F 5 HOH B 57 460 97 HOH HOH . F 5 HOH B 58 461 98 HOH HOH . F 5 HOH B 59 462 99 HOH HOH . F 5 HOH B 60 463 100 HOH HOH . F 5 HOH B 61 464 101 HOH HOH . F 5 HOH B 62 465 103 HOH HOH . F 5 HOH B 63 466 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 4 10.075 13.669 34.795 1 24.04 ? P PO4 403 B 1 HETATM 2 O O1 PO4 . . . D 4 9.046 12.758 35.46 1 26.5 ? O1 PO4 403 B 1 HETATM 3 O O2 PO4 . . . D 4 9.476 14.673 33.933 1 22.99 ? O2 PO4 403 B 1 HETATM 4 O O3 PO4 . . . D 4 11.044 12.861 33.986 1 20.67 ? O3 PO4 403 B 1 HETATM 5 O O4 PO4 . . . D 4 10.947 14.154 35.957 1 21.22 ? O4 PO4 403 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 5 #