data_1BXS
#
_model_server_result.job_id            3Fjrru_wIUKQ2YaMcXNSyw 
_model_server_result.datetime_utc      '2024-10-20 22:47:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1bxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":550}' 
#
_entry.id    1BXS 
#
_exptl.entry_id    1BXS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         110.47 
_cell.angle_beta          105.63 
_cell.angle_gamma         103.56 
_cell.entry_id            1BXS 
_cell.length_a            80.689 
_cell.length_b            87.625 
_cell.length_c            90.84 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1BXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     1BXS 
_atom_sites.fract_transf_matrix[1][1]    0.012393 
_atom_sites.fract_transf_matrix[1][2]    0.002989 
_atom_sites.fract_transf_matrix[1][3]    0.005332 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01174 
_atom_sites.fract_transf_matrix[2][3]    0.005769 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012737 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAD A 1 550 550 NAD NAD . 
F 2 NAD B 1 550 550 NAD NAD . 
G 2 NAD C 1 550 550 NAD NAD . 
H 2 NAD D 1 550 550 NAD NAD . 
I 3 HOH A 1 601 601 HOH HOH . 
I 3 HOH A 2 602 602 HOH HOH . 
I 3 HOH A 3 603 603 HOH HOH . 
I 3 HOH A 4 604 604 HOH HOH . 
I 3 HOH A 5 605 605 HOH HOH . 
I 3 HOH A 6 606 606 HOH HOH . 
I 3 HOH A 7 607 607 HOH HOH . 
I 3 HOH A 8 608 608 HOH HOH . 
I 3 HOH A 9 609 609 HOH HOH . 
I 3 HOH A 10 610 610 HOH HOH . 
I 3 HOH A 11 611 611 HOH HOH . 
I 3 HOH A 12 612 612 HOH HOH . 
I 3 HOH A 13 613 613 HOH HOH . 
I 3 HOH A 14 614 614 HOH HOH . 
I 3 HOH A 15 615 615 HOH HOH . 
I 3 HOH A 16 616 616 HOH HOH . 
I 3 HOH A 17 617 617 HOH HOH . 
I 3 HOH A 18 618 618 HOH HOH . 
I 3 HOH A 19 619 619 HOH HOH . 
I 3 HOH A 20 620 620 HOH HOH . 
I 3 HOH A 21 621 621 HOH HOH . 
I 3 HOH A 22 622 622 HOH HOH . 
I 3 HOH A 23 623 623 HOH HOH . 
I 3 HOH A 24 624 624 HOH HOH . 
I 3 HOH A 25 625 625 HOH HOH . 
I 3 HOH A 26 626 626 HOH HOH . 
I 3 HOH A 27 627 627 HOH HOH . 
I 3 HOH A 28 628 628 HOH HOH . 
I 3 HOH A 29 629 629 HOH HOH . 
I 3 HOH A 30 630 630 HOH HOH . 
I 3 HOH A 31 631 631 HOH HOH . 
I 3 HOH A 32 632 632 HOH HOH . 
J 3 HOH B 1 601 601 HOH HOH . 
J 3 HOH B 2 602 602 HOH HOH . 
J 3 HOH B 3 603 603 HOH HOH . 
J 3 HOH B 4 604 604 HOH HOH . 
J 3 HOH B 5 605 605 HOH HOH . 
J 3 HOH B 6 606 606 HOH HOH . 
J 3 HOH B 7 607 607 HOH HOH . 
J 3 HOH B 8 608 608 HOH HOH . 
J 3 HOH B 9 609 609 HOH HOH . 
J 3 HOH B 10 610 610 HOH HOH . 
J 3 HOH B 11 611 611 HOH HOH . 
J 3 HOH B 12 612 612 HOH HOH . 
J 3 HOH B 13 613 613 HOH HOH . 
J 3 HOH B 14 614 614 HOH HOH . 
J 3 HOH B 15 615 615 HOH HOH . 
J 3 HOH B 16 616 616 HOH HOH . 
J 3 HOH B 17 617 617 HOH HOH . 
J 3 HOH B 18 618 618 HOH HOH . 
J 3 HOH B 19 619 619 HOH HOH . 
J 3 HOH B 20 620 620 HOH HOH . 
J 3 HOH B 21 621 621 HOH HOH . 
J 3 HOH B 22 622 622 HOH HOH . 
J 3 HOH B 23 623 623 HOH HOH . 
J 3 HOH B 24 624 624 HOH HOH . 
J 3 HOH B 25 625 625 HOH HOH . 
J 3 HOH B 26 626 626 HOH HOH . 
J 3 HOH B 27 627 627 HOH HOH . 
J 3 HOH B 28 628 628 HOH HOH . 
J 3 HOH B 29 629 629 HOH HOH . 
J 3 HOH B 30 630 630 HOH HOH . 
J 3 HOH B 31 631 631 HOH HOH . 
J 3 HOH B 32 632 632 HOH HOH . 
K 3 HOH C 1 601 601 HOH HOH . 
K 3 HOH C 2 602 602 HOH HOH . 
K 3 HOH C 3 603 603 HOH HOH . 
K 3 HOH C 4 604 604 HOH HOH . 
K 3 HOH C 5 605 605 HOH HOH . 
K 3 HOH C 6 606 606 HOH HOH . 
K 3 HOH C 7 607 607 HOH HOH . 
K 3 HOH C 8 608 608 HOH HOH . 
K 3 HOH C 9 609 609 HOH HOH . 
K 3 HOH C 10 610 610 HOH HOH . 
K 3 HOH C 11 611 611 HOH HOH . 
K 3 HOH C 12 612 612 HOH HOH . 
K 3 HOH C 13 613 613 HOH HOH . 
K 3 HOH C 14 614 614 HOH HOH . 
K 3 HOH C 15 615 615 HOH HOH . 
K 3 HOH C 16 616 616 HOH HOH . 
K 3 HOH C 17 617 617 HOH HOH . 
K 3 HOH C 18 618 618 HOH HOH . 
K 3 HOH C 19 619 619 HOH HOH . 
K 3 HOH C 20 620 620 HOH HOH . 
K 3 HOH C 21 621 621 HOH HOH . 
K 3 HOH C 22 622 622 HOH HOH . 
K 3 HOH C 23 623 623 HOH HOH . 
K 3 HOH C 24 624 624 HOH HOH . 
K 3 HOH C 25 625 625 HOH HOH . 
K 3 HOH C 26 626 626 HOH HOH . 
K 3 HOH C 27 627 627 HOH HOH . 
K 3 HOH C 28 628 628 HOH HOH . 
K 3 HOH C 29 629 629 HOH HOH . 
K 3 HOH C 30 630 630 HOH HOH . 
K 3 HOH C 31 631 631 HOH HOH . 
K 3 HOH C 32 632 632 HOH HOH . 
L 3 HOH D 1 601 601 HOH HOH . 
L 3 HOH D 2 602 602 HOH HOH . 
L 3 HOH D 3 603 603 HOH HOH . 
L 3 HOH D 4 604 604 HOH HOH . 
L 3 HOH D 5 605 605 HOH HOH . 
L 3 HOH D 6 606 606 HOH HOH . 
L 3 HOH D 7 607 607 HOH HOH . 
L 3 HOH D 8 608 608 HOH HOH . 
L 3 HOH D 9 609 609 HOH HOH . 
L 3 HOH D 10 610 610 HOH HOH . 
L 3 HOH D 11 611 611 HOH HOH . 
L 3 HOH D 12 612 612 HOH HOH . 
L 3 HOH D 13 613 613 HOH HOH . 
L 3 HOH D 14 614 614 HOH HOH . 
L 3 HOH D 15 615 615 HOH HOH . 
L 3 HOH D 16 616 616 HOH HOH . 
L 3 HOH D 17 617 617 HOH HOH . 
L 3 HOH D 18 618 618 HOH HOH . 
L 3 HOH D 19 619 619 HOH HOH . 
L 3 HOH D 20 620 620 HOH HOH . 
L 3 HOH D 21 621 621 HOH HOH . 
L 3 HOH D 22 622 622 HOH HOH . 
L 3 HOH D 23 623 623 HOH HOH . 
L 3 HOH D 24 624 624 HOH HOH . 
L 3 HOH D 25 625 625 HOH HOH . 
L 3 HOH D 26 626 626 HOH HOH . 
L 3 HOH D 27 627 627 HOH HOH . 
L 3 HOH D 28 628 628 HOH HOH . 
L 3 HOH D 29 629 629 HOH HOH . 
L 3 HOH D 30 630 630 HOH HOH . 
L 3 HOH D 31 631 631 HOH HOH . 
L 3 HOH D 32 632 632 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . H 2 60.995 18.965 35.334 1 32.69 ? PA NAD 550 D 1 
HETATM 2 O O1A NAD . . . H 2 59.683 19.604 35.59 1 34.82 ? O1A NAD 550 D 1 
HETATM 3 O O2A NAD . . . H 2 61.066 17.486 35.276 1 34.32 ? O2A NAD 550 D 1 
HETATM 4 O O5B NAD . . . H 2 62.197 19.587 36.218 1 30.41 ? O5B NAD 550 D 1 
HETATM 5 C C5B NAD . . . H 2 62.124 20.702 37.127 1 26.16 ? C5B NAD 550 D 1 
HETATM 6 C C4B NAD . . . H 2 62.545 20.342 38.555 1 26.05 ? C4B NAD 550 D 1 
HETATM 7 O O4B NAD . . . H 2 61.63 19.427 39.208 1 24.92 ? O4B NAD 550 D 1 
HETATM 8 C C3B NAD . . . H 2 63.941 19.728 38.78 1 24.37 ? C3B NAD 550 D 1 
HETATM 9 O O3B NAD . . . H 2 64.535 20.123 40.031 1 24.92 ? O3B NAD 550 D 1 
HETATM 10 C C2B NAD . . . H 2 63.622 18.247 38.836 1 22.79 ? C2B NAD 550 D 1 
HETATM 11 O O2B NAD . . . H 2 64.608 17.311 39.253 1 19.96 ? O2B NAD 550 D 1 
HETATM 12 C C1B NAD . . . H 2 62.288 18.205 39.596 1 24.12 ? C1B NAD 550 D 1 
HETATM 13 N N9A NAD . . . H 2 61.404 17.011 39.376 1 25.87 ? N9A NAD 550 D 1 
HETATM 14 C C8A NAD . . . H 2 61.444 16.123 38.349 1 26.65 ? C8A NAD 550 D 1 
HETATM 15 N N7A NAD . . . H 2 60.768 15.002 38.603 1 27.84 ? N7A NAD 550 D 1 
HETATM 16 C C5A NAD . . . H 2 60.214 15.257 39.771 1 28.1 ? C5A NAD 550 D 1 
HETATM 17 C C6A NAD . . . H 2 59.26 14.467 40.444 1 27.18 ? C6A NAD 550 D 1 
HETATM 18 N N6A NAD . . . H 2 58.819 13.296 40.047 1 27.32 ? N6A NAD 550 D 1 
HETATM 19 N N1A NAD . . . H 2 58.839 14.912 41.648 1 27.08 ? N1A NAD 550 D 1 
HETATM 20 C C2A NAD . . . H 2 59.275 16.051 42.199 1 26.75 ? C2A NAD 550 D 1 
HETATM 21 N N3A NAD . . . H 2 60.147 16.819 41.542 1 24.61 ? N3A NAD 550 D 1 
HETATM 22 C C4A NAD . . . H 2 60.623 16.474 40.317 1 26.72 ? C4A NAD 550 D 1 
HETATM 23 O O3 NAD . . . H 2 61.543 19.439 33.921 1 35.47 ? O3 NAD 550 D 1 
HETATM 24 P PN NAD . . . H 2 62.423 18.592 32.877 1 35.4 ? PN NAD 550 D 1 
HETATM 25 O O1N NAD . . . H 2 62.033 17.145 32.886 1 36.39 ? O1N NAD 550 D 1 
HETATM 26 O O2N NAD . . . H 2 63.83 18.922 33.179 1 36.02 ? O2N NAD 550 D 1 
HETATM 27 O O5D NAD . . . H 2 61.985 19.385 31.522 1 37.84 ? O5D NAD 550 D 1 
HETATM 28 C C5D NAD . . . H 2 61.1 18.869 30.483 1 38.4 ? C5D NAD 550 D 1 
HETATM 29 C C4D NAD . . . H 2 60.069 19.856 29.899 1 40.07 ? C4D NAD 550 D 1 
HETATM 30 O O4D NAD . . . H 2 59.517 20.65 30.982 1 41.63 ? O4D NAD 550 D 1 
HETATM 31 C C3D NAD . . . H 2 60.677 20.935 29.011 1 39.39 ? C3D NAD 550 D 1 
HETATM 32 O O3D NAD . . . H 2 60.882 20.577 27.64 1 40.39 ? O3D NAD 550 D 1 
HETATM 33 C C2D NAD . . . H 2 59.794 22.158 29.262 1 40.09 ? C2D NAD 550 D 1 
HETATM 34 O O2D NAD . . . H 2 58.614 22.1 28.435 1 41.89 ? O2D NAD 550 D 1 
HETATM 35 C C1D NAD . . . H 2 59.461 22.097 30.762 1 41.65 ? C1D NAD 550 D 1 
HETATM 36 N N1N NAD . . . H 2 60.125 23.009 31.791 1 41.38 ? N1N NAD 550 D 1 
HETATM 37 C C2N NAD . . . H 2 59.535 24.302 31.988 1 40.52 ? C2N NAD 550 D 1 
HETATM 38 C C3N NAD . . . H 2 60.249 25.212 32.795 1 42.15 ? C3N NAD 550 D 1 
HETATM 39 C C7N NAD . . . H 2 59.688 26.559 33.273 1 42.86 ? C7N NAD 550 D 1 
HETATM 40 O O7N NAD . . . H 2 60.423 27.546 33.393 1 44.09 ? O7N NAD 550 D 1 
HETATM 41 N N7N NAD . . . H 2 58.381 26.609 33.51 1 43.81 ? N7N NAD 550 D 1 
HETATM 42 C C4N NAD . . . H 2 61.54 24.85 33.278 1 41.75 ? C4N NAD 550 D 1 
HETATM 43 C C5N NAD . . . H 2 62.169 23.598 33.105 1 41.66 ? C5N NAD 550 D 1 
HETATM 44 C C6N NAD . . . H 2 61.405 22.673 32.418 1 41.2 ? C6N NAD 550 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           44 
#