data_1BYE
#
_model_server_result.job_id            WrnPUQweAfVSi2-fMmfgsw 
_model_server_result.datetime_utc      '2025-03-04 18:57:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1bye 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1002}' 
#
_entry.id    1BYE 
#
_exptl.entry_id    1BYE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              486.546 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ATRAZINE GLUTATHIONE CONJUGATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          126.22 
_cell.angle_gamma         90 
_cell.entry_id            1BYE 
_cell.length_a            169.61 
_cell.length_b            60.28 
_cell.length_c            121.43 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1BYE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA octameric 8 software_defined_assembly 3 
PISA tetrameric 4 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
A,B,E,F,I,J 3 1,2 
C,D,G,H,K,L 3 3,4 
A,B,E,F,I,J 4 1 
C,D,G,H,K,L 4 4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
3 'crystal symmetry operation' 3_444 x-1/2,y-1/2,z-1 1 0 0 0 1 0 0 0 1 -13.053553 -30.14 -97.964151 
4 'crystal symmetry operation' 4_546 -x+1/2,y-1/2,-z+1 -1 0 0 0 1 0 0 0 -1 13.053553 -30.14 97.964151 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C18 H30 N8 O6 S' 
_chem_comp.formula_weight    486.546 
_chem_comp.id                ATA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ATRAZINE GLUTATHIONE CONJUGATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N' CA' ATA sing 70 n n 
N' "HN'1" ATA sing 71 n n 
N' "HN'2" ATA sing 72 n n 
CA' CB' ATA sing 73 n n 
CA' CC' ATA sing 74 n n 
CA' HA' ATA sing 75 n n 
CB' CG' ATA sing 76 n n 
CB' "HB'1" ATA sing 77 n n 
CB' "HB'2" ATA sing 78 n n 
CG' C' ATA sing 79 n n 
CG' "HG'1" ATA sing 80 n n 
CG' "HG'2" ATA sing 81 n n 
CC' O1' ATA doub 82 n n 
CC' O2' ATA sing 83 n n 
O2' "HO'2" ATA sing 84 n n 
C' O' ATA doub 85 n n 
C' N ATA sing 86 n n 
N5 C6 ATA doub 87 n y 
N5 C4 ATA sing 88 n y 
C6 N1 ATA sing 89 n y 
C6 N11 ATA sing 90 n n 
N1 C2 ATA doub 91 n y 
C2 N3 ATA sing 92 n y 
C2 SG ATA sing 93 n n 
N3 C4 ATA doub 94 n y 
C4 N7 ATA sing 95 n n 
N CA ATA sing 96 n n 
N HN ATA sing 97 n n 
CA C ATA sing 98 n n 
CA CB ATA sing 99 n n 
CA HA ATA sing 100 n n 
C O ATA doub 101 n n 
C ND ATA sing 102 n n 
CB SG ATA sing 103 n n 
CB HB1 ATA sing 104 n n 
CB HB2 ATA sing 105 n n 
N7 C8 ATA sing 106 n n 
N7 H7 ATA sing 107 n n 
N11 C12 ATA sing 108 n n 
N11 H11 ATA sing 109 n n 
C12 C13 ATA sing 110 n n 
C12 H121 ATA sing 111 n n 
C12 H122 ATA sing 112 n n 
C13 H131 ATA sing 113 n n 
C13 H132 ATA sing 114 n n 
C13 H133 ATA sing 115 n n 
C8 C9 ATA sing 116 n n 
C8 C10 ATA sing 117 n n 
C8 H8 ATA sing 118 n n 
C9 H91 ATA sing 119 n n 
C9 H92 ATA sing 120 n n 
C9 H93 ATA sing 121 n n 
C10 H101 ATA sing 122 n n 
C10 H102 ATA sing 123 n n 
C10 H103 ATA sing 124 n n 
ND CAD ATA sing 125 n n 
ND HN' ATA sing 126 n n 
CAD CD ATA sing 127 n n 
CAD "HA'1" ATA sing 128 n n 
CAD "HA'2" ATA sing 129 n n 
CD OD ATA doub 130 n n 
CD OT' ATA sing 131 n n 
OT' HO' ATA sing 132 n n 
#
_atom_sites.entry_id                     1BYE 
_atom_sites.fract_transf_matrix[1][1]    0.005896 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004318 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016589 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010208 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ATA A 1 1001 1001 ATA ATA . 
F 2 ATA B 1 1002 1002 ATA ATA . 
G 2 ATA C 1 1003 1003 ATA ATA . 
H 2 ATA D 1 1004 1004 ATA ATA . 
I 3 HOH A 1 1002 3 HOH HOH . 
I 3 HOH A 2 1003 10 HOH HOH . 
I 3 HOH A 3 1004 11 HOH HOH . 
I 3 HOH A 4 1005 19 HOH HOH . 
I 3 HOH A 5 1006 20 HOH HOH . 
I 3 HOH A 6 1007 26 HOH HOH . 
I 3 HOH A 7 1008 29 HOH HOH . 
I 3 HOH A 8 1009 34 HOH HOH . 
I 3 HOH A 9 1010 35 HOH HOH . 
I 3 HOH A 10 1011 43 HOH HOH . 
I 3 HOH A 11 1012 45 HOH HOH . 
J 3 HOH B 1 1003 2 HOH HOH . 
J 3 HOH B 2 1004 5 HOH HOH . 
J 3 HOH B 3 1005 6 HOH HOH . 
J 3 HOH B 4 1006 21 HOH HOH . 
J 3 HOH B 5 1007 27 HOH HOH . 
J 3 HOH B 6 1008 28 HOH HOH . 
J 3 HOH B 7 1009 30 HOH HOH . 
J 3 HOH B 8 1010 33 HOH HOH . 
J 3 HOH B 9 1011 38 HOH HOH . 
J 3 HOH B 10 1012 39 HOH HOH . 
J 3 HOH B 11 1013 40 HOH HOH . 
J 3 HOH B 12 1014 46 HOH HOH . 
K 3 HOH C 1 1004 4 HOH HOH . 
K 3 HOH C 2 1005 7 HOH HOH . 
K 3 HOH C 3 1006 12 HOH HOH . 
K 3 HOH C 4 1007 14 HOH HOH . 
K 3 HOH C 5 1008 15 HOH HOH . 
K 3 HOH C 6 1009 16 HOH HOH . 
K 3 HOH C 7 1010 17 HOH HOH . 
K 3 HOH C 8 1011 18 HOH HOH . 
K 3 HOH C 9 1012 22 HOH HOH . 
K 3 HOH C 10 1013 24 HOH HOH . 
K 3 HOH C 11 1014 31 HOH HOH . 
K 3 HOH C 12 1015 32 HOH HOH . 
K 3 HOH C 13 1016 37 HOH HOH . 
K 3 HOH C 14 1017 42 HOH HOH . 
K 3 HOH C 15 1018 44 HOH HOH . 
K 3 HOH C 16 1019 48 HOH HOH . 
L 3 HOH D 1 1005 1 HOH HOH . 
L 3 HOH D 2 1006 8 HOH HOH . 
L 3 HOH D 3 1007 9 HOH HOH . 
L 3 HOH D 4 1008 13 HOH HOH . 
L 3 HOH D 5 1009 23 HOH HOH . 
L 3 HOH D 6 1010 25 HOH HOH . 
L 3 HOH D 7 1011 36 HOH HOH . 
L 3 HOH D 8 1012 41 HOH HOH . 
L 3 HOH D 9 1013 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N' ATA . . . F 2 1.279 -1.306 29.043 0.5 23.75 ? N' ATA 1002 B 1 
HETATM 2 C CA' ATA . . . F 2 1.507 -1.653 30.467 0.5 24.36 ? CA' ATA 1002 B 1 
HETATM 3 C CB' ATA . . . F 2 2.744 -0.977 31.051 0.5 29.83 ? CB' ATA 1002 B 1 
HETATM 4 C CG' ATA . . . F 2 3.434 -1.679 32.204 0.5 24.95 ? CG' ATA 1002 B 1 
HETATM 5 C CC' ATA . . . F 2 0.28 -1.295 31.322 0.5 20.5 ? CC' ATA 1002 B 1 
HETATM 6 O O1' ATA . . . F 2 0.175 -2.05 32.339 0.5 16.65 ? O1' ATA 1002 B 1 
HETATM 7 O O2' ATA . . . F 2 -0.035 -0.078 31.308 0.5 11.08 ? O2' ATA 1002 B 1 
HETATM 8 C C' ATA . . . F 2 4.953 -1.44 32.246 0.5 33.65 ? C' ATA 1002 B 1 
HETATM 9 O O' ATA . . . F 2 5.435 -1.098 31.153 0.5 14.37 ? O' ATA 1002 B 1 
HETATM 10 N N5 ATA . . . F 2 10.933 3.417 35.118 0.5 38.46 ? N5 ATA 1002 B 1 
HETATM 11 C C6 ATA . . . F 2 10.05 3.702 34.138 0.5 37.23 ? C6 ATA 1002 B 1 
HETATM 12 N N1 ATA . . . F 2 8.854 3.119 33.987 0.5 36.96 ? N1 ATA 1002 B 1 
HETATM 13 C C2 ATA . . . F 2 8.704 2.001 34.743 0.5 40.06 ? C2 ATA 1002 B 1 
HETATM 14 N N3 ATA . . . F 2 9.523 1.595 35.742 0.5 41.57 ? N3 ATA 1002 B 1 
HETATM 15 C C4 ATA . . . F 2 10.722 2.222 35.724 0.5 49.98 ? C4 ATA 1002 B 1 
HETATM 16 N N ATA . . . F 2 5.559 -1.494 33.439 0.5 18.39 ? N ATA 1002 B 1 
HETATM 17 C CA ATA . . . F 2 6.886 -1.89 33.807 0.5 11.08 ? CA ATA 1002 B 1 
HETATM 18 C C ATA . . . F 2 7.221 -3.31 34.12 0.5 11.08 ? C ATA 1002 B 1 
HETATM 19 O O ATA . . . F 2 6.708 -4.097 34.935 0.5 17.27 ? O ATA 1002 B 1 
HETATM 20 C CB ATA . . . F 2 7.532 -0.855 34.745 0.5 14.61 ? CB ATA 1002 B 1 
HETATM 21 S SG ATA . . . F 2 7.73 0.769 33.978 0.5 28.54 ? SG ATA 1002 B 1 
HETATM 22 N N7 ATA . . . F 2 11.941 1.658 36.387 0.5 55.17 ? N7 ATA 1002 B 1 
HETATM 23 N N11 ATA . . . F 2 10.316 4.91 33.327 0.5 41.91 ? N11 ATA 1002 B 1 
HETATM 24 C C12 ATA . . . F 2 10.7 6.048 34.202 0.5 50.08 ? C12 ATA 1002 B 1 
HETATM 25 C C13 ATA . . . F 2 11.5 7.121 33.431 0.5 28.53 ? C13 ATA 1002 B 1 
HETATM 26 C C8 ATA . . . F 2 12.066 0.269 36.867 0.5 49.15 ? C8 ATA 1002 B 1 
HETATM 27 C C9 ATA . . . F 2 12.051 0.069 38.389 0.5 27.79 ? C9 ATA 1002 B 1 
HETATM 28 C C10 ATA . . . F 2 11.593 -0.91 36.013 0.5 45.74 ? C10 ATA 1002 B 1 
HETATM 29 N ND ATA . . . F 2 8.405 -3.803 33.713 0.5 11.08 ? ND ATA 1002 B 1 
HETATM 30 C CAD ATA . . . F 2 8.309 -5.176 33.196 0.5 11.71 ? CAD ATA 1002 B 1 
HETATM 31 C CD ATA . . . F 2 9.175 -6.115 34.01 0.5 22.79 ? CD ATA 1002 B 1 
HETATM 32 O OD ATA . . . F 2 8.899 -7.341 33.985 0.5 22.17 ? OD ATA 1002 B 1 
HETATM 33 O OT' ATA . . . F 2 10.223 -5.61 34.485 0.5 23.86 ? OT' ATA 1002 B 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           848 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#