data_1BYE # _model_server_result.job_id rj641yobyfUAa4CIcRzxAg _model_server_result.datetime_utc '2025-03-04 19:17:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1bye # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1003}' # _entry.id 1BYE # _exptl.entry_id 1BYE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ATRAZINE GLUTATHIONE CONJUGATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.22 _cell.angle_gamma 90 _cell.entry_id 1BYE _cell.length_a 169.61 _cell.length_b 60.28 _cell.length_c 121.43 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BYE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA octameric 8 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 A,B,E,F,I,J 3 1,2 C,D,G,H,K,L 3 3,4 A,B,E,F,I,J 4 1 C,D,G,H,K,L 4 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 3_444 x-1/2,y-1/2,z-1 1 0 0 0 1 0 0 0 1 -13.053553 -30.14 -97.964151 4 'crystal symmetry operation' 4_546 -x+1/2,y-1/2,-z+1 -1 0 0 0 1 0 0 0 -1 13.053553 -30.14 97.964151 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C18 H30 N8 O6 S' _chem_comp.formula_weight 486.546 _chem_comp.id ATA _chem_comp.mon_nstd_flag . _chem_comp.name 'ATRAZINE GLUTATHIONE CONJUGATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N' CA' ATA sing 70 n n N' "HN'1" ATA sing 71 n n N' "HN'2" ATA sing 72 n n CA' CB' ATA sing 73 n n CA' CC' ATA sing 74 n n CA' HA' ATA sing 75 n n CB' CG' ATA sing 76 n n CB' "HB'1" ATA sing 77 n n CB' "HB'2" ATA sing 78 n n CG' C' ATA sing 79 n n CG' "HG'1" ATA sing 80 n n CG' "HG'2" ATA sing 81 n n CC' O1' ATA doub 82 n n CC' O2' ATA sing 83 n n O2' "HO'2" ATA sing 84 n n C' O' ATA doub 85 n n C' N ATA sing 86 n n N5 C6 ATA doub 87 n y N5 C4 ATA sing 88 n y C6 N1 ATA sing 89 n y C6 N11 ATA sing 90 n n N1 C2 ATA doub 91 n y C2 N3 ATA sing 92 n y C2 SG ATA sing 93 n n N3 C4 ATA doub 94 n y C4 N7 ATA sing 95 n n N CA ATA sing 96 n n N HN ATA sing 97 n n CA C ATA sing 98 n n CA CB ATA sing 99 n n CA HA ATA sing 100 n n C O ATA doub 101 n n C ND ATA sing 102 n n CB SG ATA sing 103 n n CB HB1 ATA sing 104 n n CB HB2 ATA sing 105 n n N7 C8 ATA sing 106 n n N7 H7 ATA sing 107 n n N11 C12 ATA sing 108 n n N11 H11 ATA sing 109 n n C12 C13 ATA sing 110 n n C12 H121 ATA sing 111 n n C12 H122 ATA sing 112 n n C13 H131 ATA sing 113 n n C13 H132 ATA sing 114 n n C13 H133 ATA sing 115 n n C8 C9 ATA sing 116 n n C8 C10 ATA sing 117 n n C8 H8 ATA sing 118 n n C9 H91 ATA sing 119 n n C9 H92 ATA sing 120 n n C9 H93 ATA sing 121 n n C10 H101 ATA sing 122 n n C10 H102 ATA sing 123 n n C10 H103 ATA sing 124 n n ND CAD ATA sing 125 n n ND HN' ATA sing 126 n n CAD CD ATA sing 127 n n CAD "HA'1" ATA sing 128 n n CAD "HA'2" ATA sing 129 n n CD OD ATA doub 130 n n CD OT' ATA sing 131 n n OT' HO' ATA sing 132 n n # _atom_sites.entry_id 1BYE _atom_sites.fract_transf_matrix[1][1] 0.005896 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004318 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016589 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010208 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ATA A 1 1001 1001 ATA ATA . F 2 ATA B 1 1002 1002 ATA ATA . G 2 ATA C 1 1003 1003 ATA ATA . H 2 ATA D 1 1004 1004 ATA ATA . I 3 HOH A 1 1002 3 HOH HOH . I 3 HOH A 2 1003 10 HOH HOH . I 3 HOH A 3 1004 11 HOH HOH . I 3 HOH A 4 1005 19 HOH HOH . I 3 HOH A 5 1006 20 HOH HOH . I 3 HOH A 6 1007 26 HOH HOH . I 3 HOH A 7 1008 29 HOH HOH . I 3 HOH A 8 1009 34 HOH HOH . I 3 HOH A 9 1010 35 HOH HOH . I 3 HOH A 10 1011 43 HOH HOH . I 3 HOH A 11 1012 45 HOH HOH . J 3 HOH B 1 1003 2 HOH HOH . J 3 HOH B 2 1004 5 HOH HOH . J 3 HOH B 3 1005 6 HOH HOH . J 3 HOH B 4 1006 21 HOH HOH . J 3 HOH B 5 1007 27 HOH HOH . J 3 HOH B 6 1008 28 HOH HOH . J 3 HOH B 7 1009 30 HOH HOH . J 3 HOH B 8 1010 33 HOH HOH . J 3 HOH B 9 1011 38 HOH HOH . J 3 HOH B 10 1012 39 HOH HOH . J 3 HOH B 11 1013 40 HOH HOH . J 3 HOH B 12 1014 46 HOH HOH . K 3 HOH C 1 1004 4 HOH HOH . K 3 HOH C 2 1005 7 HOH HOH . K 3 HOH C 3 1006 12 HOH HOH . K 3 HOH C 4 1007 14 HOH HOH . K 3 HOH C 5 1008 15 HOH HOH . K 3 HOH C 6 1009 16 HOH HOH . K 3 HOH C 7 1010 17 HOH HOH . K 3 HOH C 8 1011 18 HOH HOH . K 3 HOH C 9 1012 22 HOH HOH . K 3 HOH C 10 1013 24 HOH HOH . K 3 HOH C 11 1014 31 HOH HOH . K 3 HOH C 12 1015 32 HOH HOH . K 3 HOH C 13 1016 37 HOH HOH . K 3 HOH C 14 1017 42 HOH HOH . K 3 HOH C 15 1018 44 HOH HOH . K 3 HOH C 16 1019 48 HOH HOH . L 3 HOH D 1 1005 1 HOH HOH . L 3 HOH D 2 1006 8 HOH HOH . L 3 HOH D 3 1007 9 HOH HOH . L 3 HOH D 4 1008 13 HOH HOH . L 3 HOH D 5 1009 23 HOH HOH . L 3 HOH D 6 1010 25 HOH HOH . L 3 HOH D 7 1011 36 HOH HOH . L 3 HOH D 8 1012 41 HOH HOH . L 3 HOH D 9 1013 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N' ATA . . . G 2 -24.276 37.379 75.01 0.5 70.34 ? N' ATA 1003 C 1 HETATM 2 C CA' ATA . . . G 2 -25.003 37.204 76.303 0.5 61.52 ? CA' ATA 1003 C 1 HETATM 3 C CB' ATA . . . G 2 -24.26 37.875 77.454 0.5 53.64 ? CB' ATA 1003 C 1 HETATM 4 C CG' ATA . . . G 2 -25.01 37.923 78.782 0.5 54.98 ? CG' ATA 1003 C 1 HETATM 5 C CC' ATA . . . G 2 -26.418 37.777 76.166 0.5 61.97 ? CC' ATA 1003 C 1 HETATM 6 O O1' ATA . . . G 2 -27.363 36.973 76.334 0.5 60.83 ? O1' ATA 1003 C 1 HETATM 7 O O2' ATA . . . G 2 -26.539 39.021 76.137 0.5 55.23 ? O2' ATA 1003 C 1 HETATM 8 C C' ATA . . . G 2 -24.395 38.943 79.752 0.5 54.67 ? C' ATA 1003 C 1 HETATM 9 O O' ATA . . . G 2 -23.551 39.706 79.258 0.5 56.18 ? O' ATA 1003 C 1 HETATM 10 N N5 ATA . . . G 2 -24.2 45.491 84.521 0.5 72.88 ? N5 ATA 1003 C 1 HETATM 11 C C6 ATA . . . G 2 -24.415 45.68 83.208 0.5 64.65 ? C6 ATA 1003 C 1 HETATM 12 N N1 ATA . . . G 2 -24.779 44.737 82.337 0.5 60.85 ? N1 ATA 1003 C 1 HETATM 13 C C2 ATA . . . G 2 -24.753 43.498 82.839 0.5 63.39 ? C2 ATA 1003 C 1 HETATM 14 N N3 ATA . . . G 2 -24.505 43.173 84.12 0.5 60.25 ? N3 ATA 1003 C 1 HETATM 15 C C4 ATA . . . G 2 -23.983 44.192 84.84 0.5 71.76 ? C4 ATA 1003 C 1 HETATM 16 N N ATA . . . G 2 -24.431 38.609 81.032 0.5 58.07 ? N ATA 1003 C 1 HETATM 17 C CA ATA . . . G 2 -24.473 39.421 82.232 0.5 58.02 ? CA ATA 1003 C 1 HETATM 18 C C ATA . . . G 2 -24.871 38.575 83.454 0.5 53.21 ? C ATA 1003 C 1 HETATM 19 O O ATA . . . G 2 -26.077 38.494 83.724 0.5 46.78 ? O ATA 1003 C 1 HETATM 20 C CB ATA . . . G 2 -25.413 40.645 82.158 0.5 52.58 ? CB ATA 1003 C 1 HETATM 21 S SG ATA . . . G 2 -24.582 42.195 81.642 0.5 67.16 ? SG ATA 1003 C 1 HETATM 22 N N7 ATA . . . G 2 -22.769 43.995 85.72 0.5 77.68 ? N7 ATA 1003 C 1 HETATM 23 N N11 ATA . . . G 2 -24.049 47.009 82.665 0.5 63.26 ? N11 ATA 1003 C 1 HETATM 24 C C12 ATA . . . G 2 -24.432 48.073 83.626 0.5 66.33 ? C12 ATA 1003 C 1 HETATM 25 C C13 ATA . . . G 2 -23.742 49.396 83.224 0.5 68.52 ? C13 ATA 1003 C 1 HETATM 26 C C8 ATA . . . G 2 -22.711 42.813 86.627 0.5 77.94 ? C8 ATA 1003 C 1 HETATM 27 C C9 ATA . . . G 2 -23.742 42.873 87.757 0.5 72.75 ? C9 ATA 1003 C 1 HETATM 28 C C10 ATA . . . G 2 -22.547 41.422 85.989 0.5 73.32 ? C10 ATA 1003 C 1 HETATM 29 N ND ATA . . . G 2 -23.939 38.457 84.396 0.5 58.3 ? ND ATA 1003 C 1 HETATM 30 C CAD ATA . . . G 2 -22.695 37.749 84.127 0.5 63.28 ? CAD ATA 1003 C 1 HETATM 31 C CD ATA . . . G 2 -22.802 36.28 84.503 0.5 69.63 ? CD ATA 1003 C 1 HETATM 32 O OD ATA . . . G 2 -22.161 35.437 83.837 0.5 71.29 ? OD ATA 1003 C 1 HETATM 33 O OT' ATA . . . G 2 -23.604 35.971 85.414 0.5 68.67 ? OT' ATA 1003 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #