data_1BYP # _model_server_result.job_id rb8zzlDD9polMP0LXsGJ9A _model_server_result.datetime_utc '2025-02-27 02:40:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1byp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":100}' # _entry.id 1BYP # _exptl.entry_id 1BYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1BYP _cell.length_a 55.9 _cell.length_b 55.9 _cell.length_c 68.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 37 A HIS 37 1_555 B CU CU . A CU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc2 A SG CYS 84 A CYS 84 1_555 B CU CU . A CU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc3 A ND1 HIS 87 A HIS 87 1_555 B CU CU . A CU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1BYP _atom_sites.fract_transf_matrix[1][1] 0.017889 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 100 100 CU CU . C 3 HOH A 1 101 1 HOH HOH . C 3 HOH A 2 102 2 HOH HOH . C 3 HOH A 3 103 3 HOH HOH . C 3 HOH A 4 104 4 HOH HOH . C 3 HOH A 5 105 5 HOH HOH . C 3 HOH A 6 106 6 HOH HOH . C 3 HOH A 7 107 7 HOH HOH . C 3 HOH A 8 108 8 HOH HOH . C 3 HOH A 9 109 9 HOH HOH . C 3 HOH A 10 110 10 HOH HOH . C 3 HOH A 11 111 11 HOH HOH . C 3 HOH A 12 112 12 HOH HOH . C 3 HOH A 13 113 13 HOH HOH . C 3 HOH A 14 114 14 HOH HOH . C 3 HOH A 15 115 15 HOH HOH . C 3 HOH A 16 116 16 HOH HOH . C 3 HOH A 17 117 17 HOH HOH . C 3 HOH A 18 118 18 HOH HOH . C 3 HOH A 19 119 19 HOH HOH . C 3 HOH A 20 120 20 HOH HOH . C 3 HOH A 21 121 21 HOH HOH . C 3 HOH A 22 122 22 HOH HOH . C 3 HOH A 23 123 23 HOH HOH . C 3 HOH A 24 124 24 HOH HOH . C 3 HOH A 25 125 25 HOH HOH . C 3 HOH A 26 126 26 HOH HOH . C 3 HOH A 27 127 27 HOH HOH . C 3 HOH A 28 128 28 HOH HOH . C 3 HOH A 29 129 29 HOH HOH . C 3 HOH A 30 130 30 HOH HOH . C 3 HOH A 31 131 31 HOH HOH . C 3 HOH A 32 132 32 HOH HOH . C 3 HOH A 33 133 33 HOH HOH . C 3 HOH A 34 134 34 HOH HOH . C 3 HOH A 35 135 35 HOH HOH . C 3 HOH A 36 136 36 HOH HOH . C 3 HOH A 37 137 37 HOH HOH . C 3 HOH A 38 138 38 HOH HOH . C 3 HOH A 39 139 39 HOH HOH . C 3 HOH A 40 140 40 HOH HOH . C 3 HOH A 41 141 41 HOH HOH . C 3 HOH A 42 142 42 HOH HOH . C 3 HOH A 43 143 43 HOH HOH . C 3 HOH A 44 144 44 HOH HOH . C 3 HOH A 45 145 45 HOH HOH . C 3 HOH A 46 146 46 HOH HOH . C 3 HOH A 47 147 47 HOH HOH . C 3 HOH A 48 148 48 HOH HOH . C 3 HOH A 49 149 49 HOH HOH . C 3 HOH A 50 150 50 HOH HOH . C 3 HOH A 51 151 51 HOH HOH . C 3 HOH A 52 152 52 HOH HOH . C 3 HOH A 53 153 53 HOH HOH . C 3 HOH A 54 154 54 HOH HOH . C 3 HOH A 55 155 55 HOH HOH . C 3 HOH A 56 156 56 HOH HOH . C 3 HOH A 57 157 57 HOH HOH . C 3 HOH A 58 158 58 HOH HOH . C 3 HOH A 59 159 59 HOH HOH . C 3 HOH A 60 160 60 HOH HOH . C 3 HOH A 61 161 61 HOH HOH . C 3 HOH A 62 162 62 HOH HOH . C 3 HOH A 63 163 63 HOH HOH . C 3 HOH A 64 164 64 HOH HOH . C 3 HOH A 65 165 65 HOH HOH . C 3 HOH A 66 166 66 HOH HOH . C 3 HOH A 67 167 67 HOH HOH . C 3 HOH A 68 168 68 HOH HOH . C 3 HOH A 69 169 69 HOH HOH . C 3 HOH A 70 170 70 HOH HOH . C 3 HOH A 71 171 71 HOH HOH . C 3 HOH A 72 172 72 HOH HOH . C 3 HOH A 73 173 73 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.744 _atom_site.Cartn_y 21.795 _atom_site.Cartn_z 9.432 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 100 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 435 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #