data_1BYU
#
_model_server_result.job_id            Lu2fB6PNSnqn-T4ZyR7t9Q 
_model_server_result.datetime_utc      '2024-12-23 06:09:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1byu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":221}' 
#
_entry.id    1BYU 
#
_exptl.entry_id    1BYU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.67 
_cell.angle_gamma         90 
_cell.entry_id            1BYU 
_cell.length_a            60.79 
_cell.length_b            60.433 
_cell.length_c            61.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1BYU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 24 A THR 24 1_555 C MG MG . A MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc2 D O1B GDP . A GDP 220 1_555 C MG MG . A MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc3 C MG MG . A MG 221 1_555 G O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc4 C MG MG . A MG 221 1_555 G O HOH . A HOH 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc5 C MG MG . A MG 221 1_555 G O HOH . A HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc6 C MG MG . A MG 221 1_555 G O HOH . A HOH 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc7 B OG1 THR 24 B THR 24 1_555 E MG MG . B MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc8 F O1B GDP . B GDP 220 1_555 E MG MG . B MG 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc9 E MG MG . B MG 221 1_555 H O HOH . B HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc10 E MG MG . B MG 221 1_555 H O HOH . B HOH 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc11 E MG MG . B MG 221 1_555 H O HOH . B HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc12 E MG MG . B MG 221 1_555 H O HOH . B HOH 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1BYU 
_atom_sites.fract_transf_matrix[1][1]    0.01645 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003398 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016547 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016685 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 221 221 MG MG . 
D 3 GDP A 1 220 220 GDP GDP . 
E 2 MG B 1 221 221 MG MG . 
F 3 GDP B 1 220 220 GDP GDP . 
G 4 HOH A 1 246 246 HOH HOH . 
G 4 HOH A 2 247 247 HOH HOH . 
G 4 HOH A 3 248 248 HOH HOH . 
G 4 HOH A 4 249 251 HOH HOH . 
G 4 HOH A 5 250 2 HOH HOH . 
G 4 HOH A 6 251 3 HOH HOH . 
G 4 HOH A 7 252 4 HOH HOH . 
G 4 HOH A 8 253 7 HOH HOH . 
G 4 HOH A 9 254 8 HOH HOH . 
G 4 HOH A 10 255 12 HOH HOH . 
G 4 HOH A 11 256 13 HOH HOH . 
G 4 HOH A 12 257 15 HOH HOH . 
G 4 HOH A 13 258 16 HOH HOH . 
G 4 HOH A 14 259 19 HOH HOH . 
G 4 HOH A 15 260 20 HOH HOH . 
G 4 HOH A 16 261 21 HOH HOH . 
G 4 HOH A 17 262 22 HOH HOH . 
G 4 HOH A 18 263 23 HOH HOH . 
G 4 HOH A 19 264 29 HOH HOH . 
G 4 HOH A 20 265 30 HOH HOH . 
G 4 HOH A 21 266 31 HOH HOH . 
G 4 HOH A 22 267 38 HOH HOH . 
G 4 HOH A 23 268 40 HOH HOH . 
G 4 HOH A 24 269 42 HOH HOH . 
G 4 HOH A 25 270 46 HOH HOH . 
G 4 HOH A 26 271 48 HOH HOH . 
G 4 HOH A 27 272 49 HOH HOH . 
G 4 HOH A 28 273 50 HOH HOH . 
G 4 HOH A 29 274 51 HOH HOH . 
G 4 HOH A 30 275 52 HOH HOH . 
G 4 HOH A 31 276 54 HOH HOH . 
G 4 HOH A 32 277 55 HOH HOH . 
G 4 HOH A 33 278 56 HOH HOH . 
G 4 HOH A 34 279 59 HOH HOH . 
G 4 HOH A 35 280 60 HOH HOH . 
G 4 HOH A 36 281 65 HOH HOH . 
G 4 HOH A 37 282 67 HOH HOH . 
G 4 HOH A 38 283 69 HOH HOH . 
G 4 HOH A 39 284 70 HOH HOH . 
G 4 HOH A 40 285 75 HOH HOH . 
G 4 HOH A 41 286 76 HOH HOH . 
G 4 HOH A 42 287 77 HOH HOH . 
G 4 HOH A 43 288 82 HOH HOH . 
G 4 HOH A 44 289 83 HOH HOH . 
G 4 HOH A 45 290 88 HOH HOH . 
G 4 HOH A 46 291 91 HOH HOH . 
G 4 HOH A 47 292 92 HOH HOH . 
G 4 HOH A 48 293 93 HOH HOH . 
G 4 HOH A 49 294 94 HOH HOH . 
G 4 HOH A 50 295 95 HOH HOH . 
G 4 HOH A 51 296 100 HOH HOH . 
G 4 HOH A 52 297 101 HOH HOH . 
G 4 HOH A 53 298 102 HOH HOH . 
G 4 HOH A 54 299 104 HOH HOH . 
G 4 HOH A 55 300 105 HOH HOH . 
G 4 HOH A 56 301 106 HOH HOH . 
G 4 HOH A 57 302 108 HOH HOH . 
G 4 HOH A 58 303 109 HOH HOH . 
G 4 HOH A 59 304 112 HOH HOH . 
G 4 HOH A 60 305 113 HOH HOH . 
G 4 HOH A 61 306 114 HOH HOH . 
G 4 HOH A 62 307 117 HOH HOH . 
G 4 HOH A 63 308 118 HOH HOH . 
G 4 HOH A 64 309 119 HOH HOH . 
G 4 HOH A 65 310 121 HOH HOH . 
G 4 HOH A 66 311 122 HOH HOH . 
G 4 HOH A 67 312 123 HOH HOH . 
G 4 HOH A 68 313 124 HOH HOH . 
G 4 HOH A 69 314 126 HOH HOH . 
G 4 HOH A 70 315 127 HOH HOH . 
G 4 HOH A 71 316 128 HOH HOH . 
G 4 HOH A 72 317 129 HOH HOH . 
G 4 HOH A 73 318 130 HOH HOH . 
G 4 HOH A 74 319 131 HOH HOH . 
G 4 HOH A 75 320 133 HOH HOH . 
G 4 HOH A 76 321 139 HOH HOH . 
G 4 HOH A 77 322 140 HOH HOH . 
G 4 HOH A 78 323 141 HOH HOH . 
G 4 HOH A 79 324 142 HOH HOH . 
G 4 HOH A 80 325 144 HOH HOH . 
G 4 HOH A 81 326 147 HOH HOH . 
G 4 HOH A 82 327 149 HOH HOH . 
G 4 HOH A 83 328 154 HOH HOH . 
G 4 HOH A 84 329 156 HOH HOH . 
G 4 HOH A 85 330 158 HOH HOH . 
G 4 HOH A 86 331 159 HOH HOH . 
G 4 HOH A 87 332 163 HOH HOH . 
G 4 HOH A 88 333 164 HOH HOH . 
G 4 HOH A 89 334 166 HOH HOH . 
G 4 HOH A 90 335 167 HOH HOH . 
G 4 HOH A 91 336 176 HOH HOH . 
G 4 HOH A 92 337 179 HOH HOH . 
G 4 HOH A 93 338 180 HOH HOH . 
G 4 HOH A 94 339 181 HOH HOH . 
G 4 HOH A 95 340 182 HOH HOH . 
G 4 HOH A 96 341 184 HOH HOH . 
G 4 HOH A 97 342 186 HOH HOH . 
G 4 HOH A 98 343 187 HOH HOH . 
G 4 HOH A 99 344 188 HOH HOH . 
G 4 HOH A 100 345 189 HOH HOH . 
H 4 HOH B 1 246 246 HOH HOH . 
H 4 HOH B 2 247 247 HOH HOH . 
H 4 HOH B 3 248 248 HOH HOH . 
H 4 HOH B 4 249 251 HOH HOH . 
H 4 HOH B 5 250 1 HOH HOH . 
H 4 HOH B 6 251 5 HOH HOH . 
H 4 HOH B 7 252 6 HOH HOH . 
H 4 HOH B 8 253 9 HOH HOH . 
H 4 HOH B 9 254 10 HOH HOH . 
H 4 HOH B 10 255 11 HOH HOH . 
H 4 HOH B 11 256 14 HOH HOH . 
H 4 HOH B 12 257 17 HOH HOH . 
H 4 HOH B 13 258 18 HOH HOH . 
H 4 HOH B 14 259 24 HOH HOH . 
H 4 HOH B 15 260 25 HOH HOH . 
H 4 HOH B 16 261 26 HOH HOH . 
H 4 HOH B 17 262 27 HOH HOH . 
H 4 HOH B 18 263 28 HOH HOH . 
H 4 HOH B 19 264 32 HOH HOH . 
H 4 HOH B 20 265 33 HOH HOH . 
H 4 HOH B 21 266 34 HOH HOH . 
H 4 HOH B 22 267 35 HOH HOH . 
H 4 HOH B 23 268 36 HOH HOH . 
H 4 HOH B 24 269 37 HOH HOH . 
H 4 HOH B 25 270 39 HOH HOH . 
H 4 HOH B 26 271 41 HOH HOH . 
H 4 HOH B 27 272 43 HOH HOH . 
H 4 HOH B 28 273 44 HOH HOH . 
H 4 HOH B 29 274 45 HOH HOH . 
H 4 HOH B 30 275 47 HOH HOH . 
H 4 HOH B 31 276 53 HOH HOH . 
H 4 HOH B 32 277 57 HOH HOH . 
H 4 HOH B 33 278 58 HOH HOH . 
H 4 HOH B 34 279 61 HOH HOH . 
H 4 HOH B 35 280 62 HOH HOH . 
H 4 HOH B 36 281 63 HOH HOH . 
H 4 HOH B 37 282 64 HOH HOH . 
H 4 HOH B 38 283 66 HOH HOH . 
H 4 HOH B 39 284 68 HOH HOH . 
H 4 HOH B 40 285 71 HOH HOH . 
H 4 HOH B 41 286 72 HOH HOH . 
H 4 HOH B 42 287 73 HOH HOH . 
H 4 HOH B 43 288 74 HOH HOH . 
H 4 HOH B 44 289 78 HOH HOH . 
H 4 HOH B 45 290 79 HOH HOH . 
H 4 HOH B 46 291 80 HOH HOH . 
H 4 HOH B 47 292 81 HOH HOH . 
H 4 HOH B 48 293 84 HOH HOH . 
H 4 HOH B 49 294 85 HOH HOH . 
H 4 HOH B 50 295 86 HOH HOH . 
H 4 HOH B 51 296 87 HOH HOH . 
H 4 HOH B 52 297 89 HOH HOH . 
H 4 HOH B 53 298 90 HOH HOH . 
H 4 HOH B 54 299 96 HOH HOH . 
H 4 HOH B 55 300 97 HOH HOH . 
H 4 HOH B 56 301 98 HOH HOH . 
H 4 HOH B 57 302 99 HOH HOH . 
H 4 HOH B 58 303 103 HOH HOH . 
H 4 HOH B 59 304 107 HOH HOH . 
H 4 HOH B 60 305 110 HOH HOH . 
H 4 HOH B 61 306 111 HOH HOH . 
H 4 HOH B 62 307 115 HOH HOH . 
H 4 HOH B 63 308 116 HOH HOH . 
H 4 HOH B 64 309 120 HOH HOH . 
H 4 HOH B 65 310 125 HOH HOH . 
H 4 HOH B 66 311 132 HOH HOH . 
H 4 HOH B 67 312 134 HOH HOH . 
H 4 HOH B 68 313 135 HOH HOH . 
H 4 HOH B 69 314 136 HOH HOH . 
H 4 HOH B 70 315 137 HOH HOH . 
H 4 HOH B 71 316 138 HOH HOH . 
H 4 HOH B 72 317 143 HOH HOH . 
H 4 HOH B 73 318 145 HOH HOH . 
H 4 HOH B 74 319 146 HOH HOH . 
H 4 HOH B 75 320 148 HOH HOH . 
H 4 HOH B 76 321 150 HOH HOH . 
H 4 HOH B 77 322 151 HOH HOH . 
H 4 HOH B 78 323 152 HOH HOH . 
H 4 HOH B 79 324 153 HOH HOH . 
H 4 HOH B 80 325 155 HOH HOH . 
H 4 HOH B 81 326 157 HOH HOH . 
H 4 HOH B 82 327 160 HOH HOH . 
H 4 HOH B 83 328 161 HOH HOH . 
H 4 HOH B 84 329 162 HOH HOH . 
H 4 HOH B 85 330 165 HOH HOH . 
H 4 HOH B 86 331 168 HOH HOH . 
H 4 HOH B 87 332 169 HOH HOH . 
H 4 HOH B 88 333 170 HOH HOH . 
H 4 HOH B 89 334 171 HOH HOH . 
H 4 HOH B 90 335 172 HOH HOH . 
H 4 HOH B 91 336 173 HOH HOH . 
H 4 HOH B 92 337 174 HOH HOH . 
H 4 HOH B 93 338 175 HOH HOH . 
H 4 HOH B 94 339 177 HOH HOH . 
H 4 HOH B 95 340 178 HOH HOH . 
H 4 HOH B 96 341 183 HOH HOH . 
H 4 HOH B 97 342 185 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               26.694 
_atom_site.Cartn_y               -12.225 
_atom_site.Cartn_z               3.554 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        16.46 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           221 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              32 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#