data_1C23
#
_model_server_result.job_id            JSZOhQ7dMuKthCD6wNfbcg 
_model_server_result.datetime_utc      '2024-10-10 23:28:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1c23 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":300}' 
#
_entry.id    1C23 
#
_exptl.entry_id    1C23 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              185.182 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.2 
_cell.angle_gamma         90 
_cell.entry_id            1C23 
_cell.length_a            39.221 
_cell.length_b            67.518 
_cell.length_c            48.823 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1C23 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASN 73 A ASN 74 1_555 D NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
metalc ? metalc2 A O VAL 75 A VAL 76 1_555 D NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? 
metalc ? metalc3 A OD2 ASP 96 A ASP 97 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? 
metalc ? metalc4 A OD1 ASP 96 A ASP 97 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc5 A OD1 ASP 107 A ASP 108 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? 
metalc ? metalc6 A OD2 ASP 107 A ASP 108 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc7 A NE2 HIS 170 A HIS 171 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc8 A OE2 GLU 203 A GLU 204 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc9 A O SER 230 A SER 231 1_555 D NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
metalc ? metalc10 A OE1 GLU 234 A GLU 235 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc11 A OE2 GLU 234 A GLU 235 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc12 E O2 MPH . A MPH 300 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? 
metalc ? metalc13 E O1 MPH . A MPH 300 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc14 E N MPH . A MPH 300 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc15 E O1 MPH . A MPH 300 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc16 D NA NA . A NA 501 1_555 F O HOH . A HOH 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? 
#
_chem_comp.formula           'C4 H12 N O3 P S' 
_chem_comp.formula_weight    185.182 
_chem_comp.id                MPH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHONIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     'METHIONINE PHOSPHONATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA MPH sing 237 n n 
N H MPH sing 238 n n 
N HN2 MPH sing 239 n n 
CA CB MPH sing 240 n n 
CA P MPH sing 241 n n 
CA HA MPH sing 242 n n 
CB CG MPH sing 243 n n 
CB HB1 MPH sing 244 n n 
CB HB2 MPH sing 245 n n 
CG SD MPH sing 246 n n 
CG HG1 MPH sing 247 n n 
CG HG2 MPH sing 248 n n 
SD CE MPH sing 249 n n 
CE HE1 MPH sing 250 n n 
CE HE2 MPH sing 251 n n 
CE HE3 MPH sing 252 n n 
O1 P MPH doub 253 n n 
O2 P MPH sing 254 n n 
O2 HO2 MPH sing 255 n n 
O3 P MPH sing 256 n n 
O3 HO3 MPH sing 257 n n 
#
_atom_sites.entry_id                     1C23 
_atom_sites.fract_transf_matrix[1][1]    0.025497 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009887 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014811 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021968 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CO A 1 401 401 CO CO+ . 
C 2 CO A 1 402 402 CO CO+ . 
D 3 NA A 1 501 501 NA NA+ . 
E 4 MPH A 1 300 1 MPH INH . 
F 5 HOH A 1 502 1 HOH HOH . 
F 5 HOH A 2 503 2 HOH HOH . 
F 5 HOH A 3 504 3 HOH HOH . 
F 5 HOH A 4 505 4 HOH HOH . 
F 5 HOH A 5 506 5 HOH HOH . 
F 5 HOH A 6 507 6 HOH HOH . 
F 5 HOH A 7 508 7 HOH HOH . 
F 5 HOH A 8 509 8 HOH HOH . 
F 5 HOH A 9 510 9 HOH HOH . 
F 5 HOH A 10 511 10 HOH HOH . 
F 5 HOH A 11 512 11 HOH HOH . 
F 5 HOH A 12 513 12 HOH HOH . 
F 5 HOH A 13 514 13 HOH HOH . 
F 5 HOH A 14 515 14 HOH HOH . 
F 5 HOH A 15 516 15 HOH HOH . 
F 5 HOH A 16 517 16 HOH HOH . 
F 5 HOH A 17 518 17 HOH HOH . 
F 5 HOH A 18 519 18 HOH HOH . 
F 5 HOH A 19 520 19 HOH HOH . 
F 5 HOH A 20 521 20 HOH HOH . 
F 5 HOH A 21 522 21 HOH HOH . 
F 5 HOH A 22 523 22 HOH HOH . 
F 5 HOH A 23 524 23 HOH HOH . 
F 5 HOH A 24 525 24 HOH HOH . 
F 5 HOH A 25 526 25 HOH HOH . 
F 5 HOH A 26 527 26 HOH HOH . 
F 5 HOH A 27 528 27 HOH HOH . 
F 5 HOH A 28 529 28 HOH HOH . 
F 5 HOH A 29 530 29 HOH HOH . 
F 5 HOH A 30 531 30 HOH HOH . 
F 5 HOH A 31 532 31 HOH HOH . 
F 5 HOH A 32 533 32 HOH HOH . 
F 5 HOH A 33 534 33 HOH HOH . 
F 5 HOH A 34 535 34 HOH HOH . 
F 5 HOH A 35 536 35 HOH HOH . 
F 5 HOH A 36 537 36 HOH HOH . 
F 5 HOH A 37 538 37 HOH HOH . 
F 5 HOH A 38 539 38 HOH HOH . 
F 5 HOH A 39 540 39 HOH HOH . 
F 5 HOH A 40 541 40 HOH HOH . 
F 5 HOH A 41 542 41 HOH HOH . 
F 5 HOH A 42 543 42 HOH HOH . 
F 5 HOH A 43 544 43 HOH HOH . 
F 5 HOH A 44 545 44 HOH HOH . 
F 5 HOH A 45 546 45 HOH HOH . 
F 5 HOH A 46 547 46 HOH HOH . 
F 5 HOH A 47 548 47 HOH HOH . 
F 5 HOH A 48 549 48 HOH HOH . 
F 5 HOH A 49 550 49 HOH HOH . 
F 5 HOH A 50 551 50 HOH HOH . 
F 5 HOH A 51 552 51 HOH HOH . 
F 5 HOH A 52 553 52 HOH HOH . 
F 5 HOH A 53 554 53 HOH HOH . 
F 5 HOH A 54 555 54 HOH HOH . 
F 5 HOH A 55 556 55 HOH HOH . 
F 5 HOH A 56 557 56 HOH HOH . 
F 5 HOH A 57 558 57 HOH HOH . 
F 5 HOH A 58 559 58 HOH HOH . 
F 5 HOH A 59 560 59 HOH HOH . 
F 5 HOH A 60 561 60 HOH HOH . 
F 5 HOH A 61 562 61 HOH HOH . 
F 5 HOH A 62 563 62 HOH HOH . 
F 5 HOH A 63 564 63 HOH HOH . 
F 5 HOH A 64 565 64 HOH HOH . 
F 5 HOH A 65 566 65 HOH HOH . 
F 5 HOH A 66 567 66 HOH HOH . 
F 5 HOH A 67 568 67 HOH HOH . 
F 5 HOH A 68 569 68 HOH HOH . 
F 5 HOH A 69 570 69 HOH HOH . 
F 5 HOH A 70 571 70 HOH HOH . 
F 5 HOH A 71 572 71 HOH HOH . 
F 5 HOH A 72 573 72 HOH HOH . 
F 5 HOH A 73 574 73 HOH HOH . 
F 5 HOH A 74 575 74 HOH HOH . 
F 5 HOH A 75 576 75 HOH HOH . 
F 5 HOH A 76 577 76 HOH HOH . 
F 5 HOH A 77 578 77 HOH HOH . 
F 5 HOH A 78 579 78 HOH HOH . 
F 5 HOH A 79 580 79 HOH HOH . 
F 5 HOH A 80 581 80 HOH HOH . 
F 5 HOH A 81 582 81 HOH HOH . 
F 5 HOH A 82 583 82 HOH HOH . 
F 5 HOH A 83 584 83 HOH HOH . 
F 5 HOH A 84 585 84 HOH HOH . 
F 5 HOH A 85 586 85 HOH HOH . 
F 5 HOH A 86 587 86 HOH HOH . 
F 5 HOH A 87 588 87 HOH HOH . 
F 5 HOH A 88 589 88 HOH HOH . 
F 5 HOH A 89 590 89 HOH HOH . 
F 5 HOH A 90 591 90 HOH HOH . 
F 5 HOH A 91 592 91 HOH HOH . 
F 5 HOH A 92 593 92 HOH HOH . 
F 5 HOH A 93 594 93 HOH HOH . 
F 5 HOH A 94 595 94 HOH HOH . 
F 5 HOH A 95 596 95 HOH HOH . 
F 5 HOH A 96 597 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N MPH . . . E 4 20.241 -15.409 9.201 1 9.69 ? N MPH 300 A 1 
HETATM 2 C CA MPH . . . E 4 20.79 -14.069 8.949 1 10.7 ? CA MPH 300 A 1 
HETATM 3 C CB MPH . . . E 4 22.207 -14.105 8.327 1 15.11 ? CB MPH 300 A 1 
HETATM 4 C CG MPH . . . E 4 23.285 -14.52 9.333 1 23.84 ? CG MPH 300 A 1 
HETATM 5 S SD MPH . . . E 4 24.836 -14.573 8.425 1 28.52 ? SD MPH 300 A 1 
HETATM 6 C CE MPH . . . E 4 25.971 -14.363 9.806 1 31.81 ? CE MPH 300 A 1 
HETATM 7 O O1 MPH . . . E 4 18.31 -13.357 8.465 1 16.77 ? O1 MPH 300 A 1 
HETATM 8 O O2 MPH . . . E 4 19.916 -13.736 6.4 1 15.44 ? O2 MPH 300 A 1 
HETATM 9 O O3 MPH . . . E 4 20.08 -11.615 7.951 1 11.05 ? O3 MPH 300 A 1 
HETATM 10 P P MPH . . . E 4 19.764 -13.157 7.865 1 13.44 ? P MPH 300 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#